EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000021754 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 6654 bases
Position: chrKV577796.1:23351-30004
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000015677	RVT_1	PF00078.27	3.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000037816	-	3567	-	ENSPNAP00000015677	1188 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000021754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000021754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000021754	-	94	70.851	ENSPNAG00000016635	-	97	70.851
ENSPNAG00000021754	-	92	73.232	ENSPNAG00000003539	-	91	73.232
ENSPNAG00000021754	-	94	80.105	ENSPNAG00000007038	-	97	80.105
ENSPNAG00000021754	-	81	69.488	ENSPNAG00000017596	-	92	69.488
ENSPNAG00000021754	-	93	61.000	ENSPNAG00000014625	-	92	61.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000021754	-	68	39.683	ENSACIG00000009025	-	90	39.683	Amphilophus_citrinellus
ENSPNAG00000021754	-	68	39.683	ENSACIG00000007038	-	89	35.727	Amphilophus_citrinellus
ENSPNAG00000021754	-	75	34.668	ENSACIG00000010787	-	80	34.668	Amphilophus_citrinellus
ENSPNAG00000021754	-	68	39.780	ENSACIG00000013116	-	78	39.780	Amphilophus_citrinellus
ENSPNAG00000021754	-	74	35.651	ENSACIG00000012161	-	78	35.464	Amphilophus_citrinellus
ENSPNAG00000021754	-	89	44.725	ENSAMXG00000042811	-	92	44.062	Astyanax_mexicanus
ENSPNAG00000021754	-	89	40.253	ENSCPBG00000003842	-	83	40.253	Chrysemys_picta_bellii
ENSPNAG00000021754	-	89	32.989	ENSCVAG00000004138	-	95	32.989	Cyprinodon_variegatus
ENSPNAG00000021754	-	71	42.453	ENSELUG00000004597	-	86	42.657	Esox_lucius
ENSPNAG00000021754	-	81	38.095	ENSELUG00000004618	-	84	38.245	Esox_lucius
ENSPNAG00000021754	-	71	38.090	ENSFHEG00000022106	-	93	34.431	Fundulus_heteroclitus
ENSPNAG00000021754	-	68	34.243	ENSFHEG00000002865	-	68	34.243	Fundulus_heteroclitus
ENSPNAG00000021754	-	86	33.627	ENSFHEG00000007211	-	92	33.722	Fundulus_heteroclitus
ENSPNAG00000021754	-	70	36.014	ENSFHEG00000002853	-	75	36.014	Fundulus_heteroclitus
ENSPNAG00000021754	-	51	38.399	ENSGMOG00000005227	-	100	38.399	Gadus_morhua
ENSPNAG00000021754	-	88	36.218	ENSHCOG00000007397	-	90	36.218	Hippocampus_comes
ENSPNAG00000021754	-	91	36.146	ENSHCOG00000000471	-	91	36.146	Hippocampus_comes
ENSPNAG00000021754	-	89	30.656	ENSHCOG00000007436	-	96	30.656	Hippocampus_comes
ENSPNAG00000021754	-	88	34.976	ENSHCOG00000007389	-	91	34.976	Hippocampus_comes
ENSPNAG00000021754	-	67	36.453	ENSLBEG00000003745	-	89	36.453	Labrus_bergylta
ENSPNAG00000021754	-	57	36.748	ENSLBEG00000004576	-	78	39.066	Labrus_bergylta
ENSPNAG00000021754	-	55	38.821	ENSLBEG00000006732	-	77	38.821	Labrus_bergylta
ENSPNAG00000021754	-	68	34.479	ENSLACG00000006357	-	98	34.479	Latimeria_chalumnae
ENSPNAG00000021754	-	87	38.585	ENSLOCG00000011928	-	98	38.585	Lepisosteus_oculatus
ENSPNAG00000021754	-	90	38.257	ENSLOCG00000017064	-	97	38.257	Lepisosteus_oculatus
ENSPNAG00000021754	-	89	33.608	ENSMAMG00000019985	-	89	33.700	Mastacembelus_armatus
ENSPNAG00000021754	-	88	36.278	ENSONIG00000020875	-	85	36.278	Oreochromis_niloticus
ENSPNAG00000021754	-	67	35.741	ENSOMEG00000015368	-	97	31.308	Oryzias_melastigma
ENSPNAG00000021754	-	65	35.907	ENSPMGG00000017392	-	81	35.907	Periophthalmus_magnuspinnatus
ENSPNAG00000021754	-	53	37.165	ENSPMGG00000001593	-	63	37.165	Periophthalmus_magnuspinnatus
ENSPNAG00000021754	-	70	39.711	ENSPLAG00000023379	-	96	39.711	Poecilia_latipinna
ENSPNAG00000021754	-	67	41.814	ENSPLAG00000022994	-	73	41.814	Poecilia_latipinna
ENSPNAG00000021754	-	67	41.814	ENSPLAG00000011810	-	73	41.814	Poecilia_latipinna
ENSPNAG00000021754	-	70	37.470	ENSPLAG00000011817	-	79	37.500	Poecilia_latipinna
ENSPNAG00000021754	-	66	37.626	ENSPMEG00000008574	-	71	37.626	Poecilia_mexicana
ENSPNAG00000021754	-	71	38.706	ENSPMEG00000003431	-	79	38.706	Poecilia_mexicana
ENSPNAG00000021754	-	88	33.837	ENSPREG00000005456	-	85	33.837	Poecilia_reticulata
ENSPNAG00000021754	-	78	37.589	ENSPREG00000012484	-	80	37.664	Poecilia_reticulata
ENSPNAG00000021754	-	66	39.517	ENSPREG00000005756	-	70	39.517	Poecilia_reticulata
ENSPNAG00000021754	-	89	41.100	ENSXCOG00000013093	-	91	41.100	Xiphophorus_couchianus
ENSPNAG00000021754	-	69	39.829	ENSXCOG00000008881	-	91	39.829	Xiphophorus_couchianus
ENSPNAG00000021754	-	70	38.101	ENSXMAG00000028672	-	73	38.101	Xiphophorus_maculatus