EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000021838 (Gene tree)
Gene ID: 108424984
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 14978 bases
Position: chrKV575313.1:1449576-1464553
Accession: 108424984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000015668	RRM_5	PF13893.6	5.2e-07	1	1
ENSPNAP00000015691	RRM_5	PF13893.6	5.3e-07	1	1
ENSPNAP00000015668	RRM_1	PF00076.22	6.9e-14	1	1
ENSPNAP00000015691	RRM_1	PF00076.22	7e-14	1	1
ENSPNAP00000015668	SAP	PF02037.27	5.2e-08	1	1
ENSPNAP00000015691	SAP	PF02037.27	5.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000023968	-	7642	XM_017693343	ENSPNAP00000015691	850 (aa)	XP_017548832	UPI00081420F8
ENSPNAT00000037811	-	2532	-	ENSPNAP00000015668	843 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000021838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000021838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000021838	safb	97	45.455	ENSG00000160633	SAFB	93	45.394	Homo_sapiens
ENSPNAG00000021838	safb	98	65.146	ENSAPOG00000022508	safb	99	65.308	Acanthochromis_polyacanthus
ENSPNAG00000021838	safb	99	59.740	ENSACIG00000006247	safb	100	58.824	Amphilophus_citrinellus
ENSPNAG00000021838	safb	99	60.117	ENSAOCG00000006308	safb	99	63.942	Amphiprion_ocellaris
ENSPNAG00000021838	safb	99	65.127	ENSAPEG00000023342	safb	99	64.524	Amphiprion_percula
ENSPNAG00000021838	safb	99	65.823	ENSATEG00000004998	safb	99	65.012	Anabas_testudineus
ENSPNAG00000021838	safb	93	42.969	ENSAPLG00000005780	-	97	45.848	Anas_platyrhynchos
ENSPNAG00000021838	safb	59	46.809	ENSAPLG00000006355	-	99	49.825	Anas_platyrhynchos
ENSPNAG00000021838	safb	97	45.931	ENSANAG00000028821	SAFB	93	45.283	Aotus_nancymaae
ENSPNAG00000021838	safb	99	64.345	ENSACLG00000001926	safb	99	63.325	Astatotilapia_calliptera
ENSPNAG00000021838	safb	98	84.167	ENSAMXG00000018154	safb	100	83.834	Astyanax_mexicanus
ENSPNAG00000021838	safb	97	45.768	ENSBTAG00000007875	SAFB	95	43.694	Bos_taurus
ENSPNAG00000021838	safb	74	56.522	ENSCJAG00000017081	SAFB	90	52.500	Callithrix_jacchus
ENSPNAG00000021838	safb	66	44.268	ENSCAFG00000018803	SAFB	81	44.358	Canis_familiaris
ENSPNAG00000021838	safb	66	44.108	ENSCAFG00020018943	SAFB	93	44.199	Canis_lupus_dingo
ENSPNAG00000021838	safb	98	45.158	ENSCHIG00000007262	SAFB	95	42.632	Capra_hircus
ENSPNAG00000021838	safb	97	46.600	ENSCCAG00000020193	SAFB	93	45.829	Cebus_capucinus
ENSPNAG00000021838	safb	97	44.851	ENSCATG00000029994	SAFB	93	45.243	Cercocebus_atys
ENSPNAG00000021838	safb	64	43.269	ENSCLAG00000007734	SAFB	68	61.475	Chinchilla_lanigera
ENSPNAG00000021838	safb	97	44.444	ENSCSAG00000009949	SAFB	93	45.243	Chlorocebus_sabaeus
ENSPNAG00000021838	safb	92	45.098	ENSCPBG00000010928	-	96	44.982	Chrysemys_picta_bellii
ENSPNAG00000021838	safb	91	47.092	ENSCPBG00000010936	-	66	57.458	Chrysemys_picta_bellii
ENSPNAG00000021838	safb	97	43.581	ENSCANG00000019754	-	95	42.809	Colobus_angolensis_palliatus
ENSPNAG00000021838	safb	89	46.328	ENSCANG00000004774	-	92	45.087	Colobus_angolensis_palliatus
ENSPNAG00000021838	safb	98	57.479	ENSCSEG00000019870	safb	99	57.429	Cynoglossus_semilaevis
ENSPNAG00000021838	safb	98	56.190	ENSCVAG00000002226	safb	66	65.730	Cyprinodon_variegatus
ENSPNAG00000021838	safb	98	70.379	ENSDARG00000020467	safb	99	70.345	Danio_rerio
ENSPNAG00000021838	safb	97	45.133	ENSDNOG00000015746	SAFB	79	43.513	Dasypus_novemcinctus
ENSPNAG00000021838	safb	64	42.605	ENSDORG00000016200	Safb	93	42.889	Dipodomys_ordii
ENSPNAG00000021838	safb	64	45.380	ENSEASG00005023019	SAFB	97	43.102	Equus_asinus_asinus
ENSPNAG00000021838	safb	64	45.847	ENSECAG00000018659	SAFB	87	44.168	Equus_caballus
ENSPNAG00000021838	safb	100	65.148	ENSELUG00000022327	safb	100	64.652	Esox_lucius
ENSPNAG00000021838	safb	66	44.888	ENSFCAG00000011835	SAFB	93	44.578	Felis_catus
ENSPNAG00000021838	safb	99	44.587	ENSFALG00000013882	-	89	46.318	Ficedula_albicollis
ENSPNAG00000021838	safb	57	45.567	ENSFALG00000013881	-	65	58.131	Ficedula_albicollis
ENSPNAG00000021838	safb	86	51.299	ENSFDAG00000020306	SAFB	53	55.396	Fukomys_damarensis
ENSPNAG00000021838	safb	66	67.140	ENSFHEG00000004219	safb	99	57.583	Fundulus_heteroclitus
ENSPNAG00000021838	safb	98	57.278	ENSGMOG00000014280	safb	99	58.205	Gadus_morhua
ENSPNAG00000021838	safb	99	44.176	ENSGALG00000013365	-	97	46.318	Gallus_gallus
ENSPNAG00000021838	safb	66	45.672	ENSGALG00000001948	-	100	47.800	Gallus_gallus
ENSPNAG00000021838	safb	99	55.747	ENSGAFG00000016162	safb	99	55.205	Gambusia_affinis
ENSPNAG00000021838	safb	98	61.397	ENSGACG00000011385	safb	99	59.007	Gasterosteus_aculeatus
ENSPNAG00000021838	safb	96	49.409	ENSGAGG00000008424	-	99	49.467	Gopherus_agassizii
ENSPNAG00000021838	safb	62	55.226	ENSGAGG00000017702	-	82	56.593	Gopherus_agassizii
ENSPNAG00000021838	safb	97	45.151	ENSGGOG00000015109	SAFB	93	45.283	Gorilla_gorilla
ENSPNAG00000021838	safb	99	59.532	ENSHBUG00000009218	safb	99	58.197	Haplochromis_burtoni
ENSPNAG00000021838	safb	64	43.387	ENSHGLG00000015883	SAFB	68	61.475	Heterocephalus_glaber_female
ENSPNAG00000021838	safb	94	55.802	ENSHCOG00000001705	safb	99	56.089	Hippocampus_comes
ENSPNAG00000021838	safb	100	78.621	ENSIPUG00000024869	safb2	100	79.089	Ictalurus_punctatus
ENSPNAG00000021838	safb	59	41.897	ENSSTOG00000002783	SAFB	96	42.873	Ictidomys_tridecemlineatus
ENSPNAG00000021838	safb	64	43.891	ENSJJAG00000009021	Safb	94	45.038	Jaculus_jaculus
ENSPNAG00000021838	safb	99	63.540	ENSKMAG00000022308	safb	99	63.306	Kryptolebias_marmoratus
ENSPNAG00000021838	safb	98	62.704	ENSLBEG00000006015	safb	99	60.702	Labrus_bergylta
ENSPNAG00000021838	safb	66	46.474	ENSLACG00000018090	SAFB	97	51.209	Latimeria_chalumnae
ENSPNAG00000021838	safb	98	66.279	ENSLOCG00000003613	safb	91	76.812	Lepisosteus_oculatus
ENSPNAG00000021838	safb	97	45.485	ENSLAFG00000003840	SAFB	95	44.284	Loxodonta_africana
ENSPNAG00000021838	safb	97	45.525	ENSMFAG00000003885	SAFB	93	45.465	Macaca_fascicularis
ENSPNAG00000021838	safb	97	46.042	ENSMMUG00000017970	SAFB	93	45.565	Macaca_mulatta
ENSPNAG00000021838	safb	97	43.784	ENSMNEG00000035637	SAFB	94	42.257	Macaca_nemestrina
ENSPNAG00000021838	safb	95	44.743	ENSMLEG00000038637	SAFB	94	40.787	Mandrillus_leucophaeus
ENSPNAG00000021838	safb	99	64.376	ENSMAMG00000003357	safb	92	63.345	Mastacembelus_armatus
ENSPNAG00000021838	safb	99	64.516	ENSMZEG00005009120	safb	99	63.626	Maylandia_zebra
ENSPNAG00000021838	safb	97	43.157	ENSMGAG00000001101	-	94	45.590	Meleagris_gallopavo
ENSPNAG00000021838	safb	65	47.476	ENSMGAG00000001051	-	99	49.233	Meleagris_gallopavo
ENSPNAG00000021838	safb	65	44.605	ENSMICG00000008739	-	94	42.920	Microcebus_murinus
ENSPNAG00000021838	safb	85	40.256	ENSMICG00000046795	-	71	71.014	Microcebus_murinus
ENSPNAG00000021838	safb	97	44.896	ENSMODG00000001236	SAFB	93	42.746	Monodelphis_domestica
ENSPNAG00000021838	safb	99	64.576	ENSMALG00000020330	safb	99	62.950	Monopterus_albus
ENSPNAG00000021838	safb	66	44.817	ENSMPUG00000006123	SAFB	52	52.468	Mustela_putorius_furo
ENSPNAG00000021838	safb	98	45.279	ENSMLUG00000001081	SAFB	56	48.231	Myotis_lucifugus
ENSPNAG00000021838	safb	97	45.973	ENSNLEG00000013551	SAFB	97	43.424	Nomascus_leucogenys
ENSPNAG00000021838	safb	59	42.908	ENSOPRG00000011561	-	98	41.050	Ochotona_princeps
ENSPNAG00000021838	safb	64	43.109	ENSODEG00000014838	SAFB	72	60.656	Octodon_degus
ENSPNAG00000021838	safb	99	64.070	ENSONIG00000002318	safb	99	63.889	Oreochromis_niloticus
ENSPNAG00000021838	safb	97	59.572	ENSORLG00000016989	safb	99	57.780	Oryzias_latipes
ENSPNAG00000021838	safb	97	56.699	ENSORLG00020000404	safb	99	55.530	Oryzias_latipes_hni
ENSPNAG00000021838	safb	97	59.390	ENSORLG00015010733	safb	99	57.865	Oryzias_latipes_hsok
ENSPNAG00000021838	safb	99	60.845	ENSOMEG00000009066	safb	99	58.998	Oryzias_melastigma
ENSPNAG00000021838	safb	64	45.799	ENSOGAG00000027769	SAFB	92	45.701	Otolemur_garnettii
ENSPNAG00000021838	safb	97	42.586	ENSOARG00000007662	-	95	42.841	Ovis_aries
ENSPNAG00000021838	safb	97	45.455	ENSPPAG00000035129	SAFB	94	43.210	Pan_paniscus
ENSPNAG00000021838	safb	66	44.888	ENSPPRG00000017197	SAFB	93	44.578	Panthera_pardus
ENSPNAG00000021838	safb	97	45.455	ENSPTRG00000010335	SAFB	94	43.210	Pan_troglodytes
ENSPNAG00000021838	safb	97	45.525	ENSPANG00000007770	SAFB	93	45.264	Papio_anubis
ENSPNAG00000021838	safb	100	68.136	ENSPKIG00000009902	safb	100	66.779	Paramormyrops_kingsleyae
ENSPNAG00000021838	safb	100	47.342	ENSPSIG00000011679	-	97	48.927	Pelodiscus_sinensis
ENSPNAG00000021838	safb	99	47.849	ENSPSIG00000009367	-	96	46.489	Pelodiscus_sinensis
ENSPNAG00000021838	safb	57	49.538	ENSPCIG00000009504	-	93	49.895	Phascolarctos_cinereus
ENSPNAG00000021838	safb	99	57.683	ENSPFOG00000007745	safb	99	55.798	Poecilia_formosa
ENSPNAG00000021838	safb	99	57.060	ENSPLAG00000001614	safb	99	53.444	Poecilia_latipinna
ENSPNAG00000021838	safb	99	57.565	ENSPMEG00000021023	safb	99	55.683	Poecilia_mexicana
ENSPNAG00000021838	safb	99	57.579	ENSPREG00000012496	safb	99	54.802	Poecilia_reticulata
ENSPNAG00000021838	safb	97	44.457	ENSPPYG00000009428	SAFB	93	45.050	Pongo_abelii
ENSPNAG00000021838	safb	97	43.667	ENSPCOG00000014090	SAFB	94	43.444	Propithecus_coquereli
ENSPNAG00000021838	safb	98	42.175	ENSPVAG00000004913	SAFB	72	58.716	Pteropus_vampyrus
ENSPNAG00000021838	safb	91	54.545	ENSRBIG00000042509	SAFB	86	51.282	Rhinopithecus_bieti
ENSPNAG00000021838	safb	97	45.344	ENSRROG00000029278	SAFB	93	45.283	Rhinopithecus_roxellana
ENSPNAG00000021838	safb	97	46.369	ENSSBOG00000026291	SAFB	93	45.708	Saimiri_boliviensis_boliviensis
ENSPNAG00000021838	safb	100	67.797	ENSSFOG00015008156	safb	100	67.119	Scleropages_formosus
ENSPNAG00000021838	safb	99	64.815	ENSSMAG00000009316	safb	99	63.552	Scophthalmus_maximus
ENSPNAG00000021838	safb	99	64.685	ENSSDUG00000009652	safb	99	63.830	Seriola_dumerili
ENSPNAG00000021838	safb	99	65.222	ENSSLDG00000001670	safb	99	64.494	Seriola_lalandi_dorsalis
ENSPNAG00000021838	safb	59	40.283	ENSSARG00000010475	SAFB	60	44.815	Sorex_araneus
ENSPNAG00000021838	safb	57	40.643	ENSSPUG00000009747	-	67	48.629	Sphenodon_punctatus
ENSPNAG00000021838	safb	51	45.597	ENSSPUG00000009820	-	69	57.848	Sphenodon_punctatus
ENSPNAG00000021838	safb	98	60.932	ENSSPAG00000015682	safb	99	60.096	Stegastes_partitus
ENSPNAG00000021838	safb	97	45.204	ENSSSCG00000013522	SAFB	52	49.910	Sus_scrofa
ENSPNAG00000021838	safb	96	44.336	ENSTGUG00000000502	-	99	45.788	Taeniopygia_guttata
ENSPNAG00000021838	safb	66	48.336	ENSTGUG00000000489	-	99	50.963	Taeniopygia_guttata
ENSPNAG00000021838	safb	98	63.872	ENSTRUG00000003567	safb	99	63.872	Takifugu_rubripes
ENSPNAG00000021838	safb	91	53.483	ENSTNIG00000015470	safb	100	54.545	Tetraodon_nigroviridis
ENSPNAG00000021838	safb	89	76.316	ENSTTRG00000013588	SAFB	61	76.316	Tursiops_truncatus
ENSPNAG00000021838	safb	76	45.114	ENSUMAG00000009734	SAFB	83	43.907	Ursus_maritimus
ENSPNAG00000021838	safb	58	55.758	ENSVPAG00000012043	SAFB	63	53.012	Vicugna_pacos
ENSPNAG00000021838	safb	66	44.268	ENSVVUG00000013720	SAFB	81	44.481	Vulpes_vulpes
ENSPNAG00000021838	safb	63	45.904	ENSXETG00000008755	safb	79	54.206	Xenopus_tropicalis
ENSPNAG00000021838	safb	99	57.981	ENSXMAG00000003458	safb	99	55.948	Xiphophorus_maculatus