EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000022162 (Gene tree)
Gene ID: 108437329
Gene Symbol: tdp2a
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 8730 bases
Position: chrKV575517.1:922774-931503
Accession: 108437329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000016049	Exo_endo_phos	PF03372.23	1.4e-08	1	1
ENSPNAP00000033495	Exo_endo_phos	PF03372.23	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000037972	-	2642	-	ENSPNAP00000016049	393 (aa)	-	UPI00081475A3
ENSPNAT00000024445	-	2529	XM_017714357	ENSPNAP00000033495	393 (aa)	XP_017569846	UPI00081475A3

Gene Model

Click here to download ENSPNAG00000022162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000022162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000022162	tdp2a	66	50.385	ENSG00000111802	TDP2	86	50.385	Homo_sapiens
ENSPNAG00000022162	tdp2a	63	57.937	ENSAPOG00000018379	-	88	57.937	Acanthochromis_polyacanthus
ENSPNAG00000022162	tdp2a	64	51.587	ENSAMEG00000010230	TDP2	90	51.587	Ailuropoda_melanoleuca
ENSPNAG00000022162	tdp2a	69	54.545	ENSAPEG00000004208	-	97	54.545	Amphiprion_percula
ENSPNAG00000022162	tdp2a	63	56.574	ENSATEG00000010663	-	81	56.574	Anabas_testudineus
ENSPNAG00000022162	tdp2a	75	48.649	ENSACAG00000002332	TDP2	78	48.649	Anolis_carolinensis
ENSPNAG00000022162	tdp2a	66	51.538	ENSANAG00000020033	TDP2	72	51.538	Aotus_nancymaae
ENSPNAG00000022162	tdp2a	63	56.627	ENSACLG00000016148	tdp2b	88	56.627	Astatotilapia_calliptera
ENSPNAG00000022162	tdp2a	63	57.028	ENSACLG00000016132	tdp2b	84	57.028	Astatotilapia_calliptera
ENSPNAG00000022162	tdp2a	63	57.028	ENSACLG00000016174	tdp2b	84	57.028	Astatotilapia_calliptera
ENSPNAG00000022162	tdp2a	63	53.441	ENSAMXG00000011775	tdp2b	65	53.441	Astyanax_mexicanus
ENSPNAG00000022162	tdp2a	68	78.339	ENSAMXG00000036549	tdp2a	90	78.339	Astyanax_mexicanus
ENSPNAG00000022162	tdp2a	77	46.230	ENSBTAG00000000365	TDP2	75	48.070	Bos_taurus
ENSPNAG00000022162	tdp2a	63	33.465	WBGene00013405	tdpt-1	67	33.465	Caenorhabditis_elegans
ENSPNAG00000022162	tdp2a	66	50.769	ENSCJAG00000021963	-	72	50.769	Callithrix_jacchus
ENSPNAG00000022162	tdp2a	66	51.538	ENSCJAG00000006074	TDP2	86	51.538	Callithrix_jacchus
ENSPNAG00000022162	tdp2a	77	48.013	ENSCAFG00000010428	TDP2	93	49.474	Canis_familiaris
ENSPNAG00000022162	tdp2a	73	49.474	ENSCAFG00020009994	TDP2	93	49.474	Canis_lupus_dingo
ENSPNAG00000022162	tdp2a	80	44.937	ENSCHIG00000015294	-	92	48.070	Capra_hircus
ENSPNAG00000022162	tdp2a	64	50.397	ENSTSYG00000037199	TDP2	82	50.397	Carlito_syrichta
ENSPNAG00000022162	tdp2a	64	52.381	ENSCPOG00000006390	TDP2	70	52.381	Cavia_porcellus
ENSPNAG00000022162	tdp2a	66	51.538	ENSCCAG00000022734	TDP2	86	51.538	Cebus_capucinus
ENSPNAG00000022162	tdp2a	66	51.154	ENSCATG00000022076	TDP2	86	51.154	Cercocebus_atys
ENSPNAG00000022162	tdp2a	64	52.778	ENSCLAG00000002072	TDP2	70	52.778	Chinchilla_lanigera
ENSPNAG00000022162	tdp2a	66	51.154	ENSCSAG00000007769	TDP2	73	51.154	Chlorocebus_sabaeus
ENSPNAG00000022162	tdp2a	63	54.878	ENSCPBG00000006551	TDP2	64	53.968	Chrysemys_picta_bellii
ENSPNAG00000022162	tdp2a	66	51.538	ENSCANG00000040122	TDP2	92	47.619	Colobus_angolensis_palliatus
ENSPNAG00000022162	tdp2a	63	52.439	ENSCGRG00001000384	Tdp2	66	52.439	Cricetulus_griseus_chok1gshd
ENSPNAG00000022162	tdp2a	63	52.439	ENSCGRG00000010250	Tdp2	70	52.439	Cricetulus_griseus_crigri
ENSPNAG00000022162	tdp2a	63	57.200	ENSCVAG00000003114	tdp2b	69	57.200	Cyprinodon_variegatus
ENSPNAG00000022162	tdp2a	93	58.421	ENSDARG00000069941	tdp2a	69	63.430	Danio_rerio
ENSPNAG00000022162	tdp2a	67	54.753	ENSDARG00000035954	tdp2b	69	54.753	Danio_rerio
ENSPNAG00000022162	tdp2a	94	40.270	ENSDNOG00000044082	TDP2	73	48.913	Dasypus_novemcinctus
ENSPNAG00000022162	tdp2a	64	53.175	ENSETEG00000019096	TDP2	91	53.175	Echinops_telfairi
ENSPNAG00000022162	tdp2a	62	45.492	ENSEBUG00000006535	tdp2a	57	45.492	Eptatretus_burgeri
ENSPNAG00000022162	tdp2a	76	45.277	ENSEASG00005007656	TDP2	75	47.719	Equus_asinus_asinus
ENSPNAG00000022162	tdp2a	76	44.951	ENSECAG00000014264	TDP2	75	47.368	Equus_caballus
ENSPNAG00000022162	tdp2a	62	54.694	ENSEEUG00000010776	TDP2	69	54.251	Erinaceus_europaeus
ENSPNAG00000022162	tdp2a	63	57.258	ENSELUG00000016449	tdp2b	65	57.258	Esox_lucius
ENSPNAG00000022162	tdp2a	75	55.229	ENSELUG00000009321	tdp2a	87	55.914	Esox_lucius
ENSPNAG00000022162	tdp2a	73	48.772	ENSFCAG00000025612	TDP2	75	48.772	Felis_catus
ENSPNAG00000022162	tdp2a	66	53.077	ENSFALG00000004710	TDP2	72	53.077	Ficedula_albicollis
ENSPNAG00000022162	tdp2a	63	52.846	ENSFDAG00000006512	TDP2	84	53.061	Fukomys_damarensis
ENSPNAG00000022162	tdp2a	66	53.053	ENSFHEG00000013560	-	89	52.672	Fundulus_heteroclitus
ENSPNAG00000022162	tdp2a	66	54.615	ENSGALG00000013637	TDP2	70	54.615	Gallus_gallus
ENSPNAG00000022162	tdp2a	63	54.472	ENSGAGG00000002853	TDP2	65	53.571	Gopherus_agassizii
ENSPNAG00000022162	tdp2a	66	50.385	ENSGGOG00000014237	TDP2	92	46.599	Gorilla_gorilla
ENSPNAG00000022162	tdp2a	63	57.430	ENSHBUG00000002714	tdp2b	69	57.430	Haplochromis_burtoni
ENSPNAG00000022162	tdp2a	64	52.381	ENSHGLG00000008655	TDP2	71	52.381	Heterocephalus_glaber_female
ENSPNAG00000022162	tdp2a	64	52.381	ENSHGLG00100019087	TDP2	71	52.381	Heterocephalus_glaber_male
ENSPNAG00000022162	tdp2a	63	53.846	ENSIPUG00000013691	tdp2b	66	53.846	Ictalurus_punctatus
ENSPNAG00000022162	tdp2a	62	50.206	ENSJJAG00000021685	Tdp2	70	50.206	Jaculus_jaculus
ENSPNAG00000022162	tdp2a	64	56.522	ENSKMAG00000015485	-	81	56.522	Kryptolebias_marmoratus
ENSPNAG00000022162	tdp2a	79	47.742	ENSLACG00000008852	TDP2	67	55.285	Latimeria_chalumnae
ENSPNAG00000022162	tdp2a	66	57.752	ENSLOCG00000005817	tdp2b	92	57.752	Lepisosteus_oculatus
ENSPNAG00000022162	tdp2a	65	52.549	ENSLAFG00000002567	TDP2	72	52.549	Loxodonta_africana
ENSPNAG00000022162	tdp2a	66	51.154	ENSMFAG00000045296	TDP2	92	47.279	Macaca_fascicularis
ENSPNAG00000022162	tdp2a	66	51.154	ENSMMUG00000009803	TDP2	73	51.154	Macaca_mulatta
ENSPNAG00000022162	tdp2a	66	51.154	ENSMNEG00000038003	TDP2	92	47.279	Macaca_nemestrina
ENSPNAG00000022162	tdp2a	66	51.154	ENSMLEG00000028883	TDP2	92	47.279	Mandrillus_leucophaeus
ENSPNAG00000022162	tdp2a	70	53.191	ENSMAMG00000013654	tdp2b	79	53.191	Mastacembelus_armatus
ENSPNAG00000022162	tdp2a	63	56.627	ENSMZEG00005004153	tdp2b	88	56.627	Maylandia_zebra
ENSPNAG00000022162	tdp2a	63	57.028	ENSMZEG00005004077	tdp2b	84	57.028	Maylandia_zebra
ENSPNAG00000022162	tdp2a	69	52.431	ENSMZEG00005004126	tdp2b	94	52.431	Maylandia_zebra
ENSPNAG00000022162	tdp2a	54	53.521	ENSMZEG00005003980	-	69	53.521	Maylandia_zebra
ENSPNAG00000022162	tdp2a	63	57.028	ENSMZEG00005003950	tdp2b	69	57.028	Maylandia_zebra
ENSPNAG00000022162	tdp2a	63	54.217	ENSMZEG00005004103	tdp2b	83	54.217	Maylandia_zebra
ENSPNAG00000022162	tdp2a	61	55.785	ENSMZEG00005004055	tdp2b	80	55.785	Maylandia_zebra
ENSPNAG00000022162	tdp2a	65	55.253	ENSMGAG00000008014	TDP2	69	55.253	Meleagris_gallopavo
ENSPNAG00000022162	tdp2a	63	52.033	ENSMAUG00000014451	Tdp2	66	52.033	Mesocricetus_auratus
ENSPNAG00000022162	tdp2a	63	52.033	ENSMICG00000000039	TDP2	83	52.245	Microcebus_murinus
ENSPNAG00000022162	tdp2a	63	51.220	ENSMOCG00000002823	Tdp2	66	51.220	Microtus_ochrogaster
ENSPNAG00000022162	tdp2a	53	52.857	ENSMODG00000011653	TDP2	77	46.484	Monodelphis_domestica
ENSPNAG00000022162	tdp2a	64	55.469	ENSMALG00000005368	-	86	55.469	Monopterus_albus
ENSPNAG00000022162	tdp2a	63	53.659	MGP_CAROLIEiJ_G0018354	Tdp2	66	53.659	Mus_caroli
ENSPNAG00000022162	tdp2a	63	52.846	ENSMUSG00000035958	Tdp2	66	52.846	Mus_musculus
ENSPNAG00000022162	tdp2a	63	52.439	MGP_PahariEiJ_G0019417	Tdp2	66	52.439	Mus_pahari
ENSPNAG00000022162	tdp2a	63	52.846	MGP_SPRETEiJ_G0019220	Tdp2	66	52.846	Mus_spretus
ENSPNAG00000022162	tdp2a	62	53.061	ENSMPUG00000004516	TDP2	70	51.984	Mustela_putorius_furo
ENSPNAG00000022162	tdp2a	65	50.775	ENSMLUG00000013506	TDP2	71	50.775	Myotis_lucifugus
ENSPNAG00000022162	tdp2a	62	49.388	ENSNGAG00000001375	Tdp2	66	49.388	Nannospalax_galili
ENSPNAG00000022162	tdp2a	66	50.769	ENSNLEG00000002447	TDP2	89	46.939	Nomascus_leucogenys
ENSPNAG00000022162	tdp2a	83	43.202	ENSOPRG00000016299	TDP2	80	46.918	Ochotona_princeps
ENSPNAG00000022162	tdp2a	64	52.381	ENSODEG00000014018	TDP2	86	52.381	Octodon_degus
ENSPNAG00000022162	tdp2a	64	50.794	ENSOCUG00000013773	TDP2	70	50.794	Oryctolagus_cuniculus
ENSPNAG00000022162	tdp2a	64	55.731	ENSORLG00000001661	-	92	55.731	Oryzias_latipes
ENSPNAG00000022162	tdp2a	64	55.731	ENSORLG00020004634	-	92	55.731	Oryzias_latipes_hni
ENSPNAG00000022162	tdp2a	63	51.394	ENSORLG00015008190	-	90	51.394	Oryzias_latipes_hsok
ENSPNAG00000022162	tdp2a	71	51.890	ENSOMEG00000015899	-	93	55.777	Oryzias_melastigma
ENSPNAG00000022162	tdp2a	75	47.973	ENSOGAG00000025303	TDP2	77	48.311	Otolemur_garnettii
ENSPNAG00000022162	tdp2a	66	50.385	ENSPPAG00000029023	TDP2	93	46.599	Pan_paniscus
ENSPNAG00000022162	tdp2a	73	48.421	ENSPPRG00000015398	TDP2	75	48.421	Panthera_pardus
ENSPNAG00000022162	tdp2a	74	48.443	ENSPTIG00000018574	TDP2	94	48.443	Panthera_tigris_altaica
ENSPNAG00000022162	tdp2a	66	50.385	ENSPTRG00000017778	TDP2	92	46.599	Pan_troglodytes
ENSPNAG00000022162	tdp2a	66	51.154	ENSPANG00000017590	TDP2	86	51.154	Papio_anubis
ENSPNAG00000022162	tdp2a	66	55.682	ENSPKIG00000006483	tdp2b	72	55.682	Paramormyrops_kingsleyae
ENSPNAG00000022162	tdp2a	63	55.285	ENSPSIG00000004948	TDP2	87	54.365	Pelodiscus_sinensis
ENSPNAG00000022162	tdp2a	63	52.439	ENSPEMG00000001788	Tdp2	66	52.439	Peromyscus_maniculatus_bairdii
ENSPNAG00000022162	tdp2a	62	45.247	ENSPMAG00000001570	tdp2b	95	45.247	Petromyzon_marinus
ENSPNAG00000022162	tdp2a	62	51.837	ENSPCIG00000007316	TDP2	64	51.837	Phascolarctos_cinereus
ENSPNAG00000022162	tdp2a	64	54.510	ENSPFOG00000017990	-	91	54.510	Poecilia_formosa
ENSPNAG00000022162	tdp2a	64	54.902	ENSPLAG00000019439	-	80	54.902	Poecilia_latipinna
ENSPNAG00000022162	tdp2a	66	53.612	ENSPMEG00000010824	-	88	53.612	Poecilia_mexicana
ENSPNAG00000022162	tdp2a	66	50.385	ENSPPYG00000016282	TDP2	66	50.385	Pongo_abelii
ENSPNAG00000022162	tdp2a	64	51.190	ENSPCOG00000021415	TDP2	88	51.190	Propithecus_coquereli
ENSPNAG00000022162	tdp2a	63	54.717	ENSPNYG00000011504	tdp2b	86	54.717	Pundamilia_nyererei
ENSPNAG00000022162	tdp2a	63	57.028	ENSPNYG00000011532	tdp2b	69	57.028	Pundamilia_nyererei
ENSPNAG00000022162	tdp2a	63	52.033	ENSRNOG00000018246	Tdp2	67	52.033	Rattus_norvegicus
ENSPNAG00000022162	tdp2a	66	51.538	ENSRBIG00000037119	TDP2	92	47.619	Rhinopithecus_bieti
ENSPNAG00000022162	tdp2a	66	51.538	ENSRROG00000005025	TDP2	92	47.619	Rhinopithecus_roxellana
ENSPNAG00000022162	tdp2a	66	51.923	ENSSBOG00000028734	TDP2	86	51.923	Saimiri_boliviensis_boliviensis
ENSPNAG00000022162	tdp2a	62	52.653	ENSSHAG00000002506	TDP2	66	52.653	Sarcophilus_harrisii
ENSPNAG00000022162	tdp2a	64	69.444	ENSSFOG00015011322	-	71	67.857	Scleropages_formosus
ENSPNAG00000022162	tdp2a	64	49.012	ENSSARG00000013547	TDP2	92	48.638	Sorex_araneus
ENSPNAG00000022162	tdp2a	64	53.968	ENSSPUG00000008288	TDP2	69	53.968	Sphenodon_punctatus
ENSPNAG00000022162	tdp2a	62	53.061	ENSSSCG00000001092	TDP2	70	51.984	Sus_scrofa
ENSPNAG00000022162	tdp2a	65	52.140	ENSTGUG00000009035	TDP2	98	52.140	Taeniopygia_guttata
ENSPNAG00000022162	tdp2a	69	50.714	ENSTRUG00000012218	-	97	50.714	Takifugu_rubripes
ENSPNAG00000022162	tdp2a	65	55.426	ENSTRUG00000014347	tdp2b	71	55.426	Takifugu_rubripes
ENSPNAG00000022162	tdp2a	63	56.972	ENSTNIG00000010260	TDP2	95	56.972	Tetraodon_nigroviridis
ENSPNAG00000022162	tdp2a	65	56.202	ENSTNIG00000017792	tdp2b	71	56.202	Tetraodon_nigroviridis
ENSPNAG00000022162	tdp2a	64	52.381	ENSTTRG00000016376	TDP2	76	47.931	Tursiops_truncatus
ENSPNAG00000022162	tdp2a	74	47.423	ENSUAMG00000025939	TDP2	80	47.423	Ursus_americanus
ENSPNAG00000022162	tdp2a	64	51.190	ENSUMAG00000020111	TDP2	84	51.190	Ursus_maritimus
ENSPNAG00000022162	tdp2a	63	53.815	ENSXETG00000014826	tdp2	67	53.815	Xenopus_tropicalis
ENSPNAG00000022162	tdp2a	63	57.143	ENSXCOG00000010778	-	70	57.143	Xiphophorus_couchianus
ENSPNAG00000022162	tdp2a	63	57.143	ENSXMAG00000022252	-	73	57.143	Xiphophorus_maculatus