EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000022241 (Gene tree)
Gene ID: 108415197
Gene Symbol: srsf1a
Alias: sfrs1a|sfrs1l|wu:fb52g10|wu:fb97g12|zgc:66146
Full Name: serine/arginine-rich splicing factor 1A
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 2998 bases
Position: chrKV577158.1:20547-23544
Accession: 108415197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000033529	RRM_1	PF00076.22	1.6e-33	1	2
ENSPNAP00000033529	RRM_1	PF00076.22	1.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000037990	-	1558	XM_017688204	ENSPNAP00000033529	244 (aa)	XP_017543693	UPI0008143BA3

Gene Model

Click here to download ENSPNAG00000022241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000022241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000022241	srsf1a	78	94.764	ENSPNAG00000014601	srsf1b	94	91.342
ENSPNAG00000022241	srsf1a	72	72.000	ENSPNAG00000003588	srsf9	72	72.000
ENSPNAG00000022241	srsf1a	66	44.571	ENSPNAG00000021333	srsf5a	60	45.714
ENSPNAG00000022241	srsf1a	64	47.619	ENSPNAG00000011262	srsf5b	82	48.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000022241	srsf1a	98	90.947	ENSG00000136450	SRSF1	95	96.774	Homo_sapiens
ENSPNAG00000022241	srsf1a	78	90.576	ENSAPOG00000002748	-	95	83.621	Acanthochromis_polyacanthus
ENSPNAG00000022241	srsf1a	78	90.576	ENSAPOG00000008542	-	94	85.714	Acanthochromis_polyacanthus
ENSPNAG00000022241	srsf1a	78	90.052	ENSAMEG00000002635	SRSF1	94	91.775	Ailuropoda_melanoleuca
ENSPNAG00000022241	srsf1a	78	91.053	ENSACIG00000008091	srsf1a	83	91.053	Amphilophus_citrinellus
ENSPNAG00000022241	srsf1a	78	88.500	ENSAOCG00000000337	-	95	85.000	Amphiprion_ocellaris
ENSPNAG00000022241	srsf1a	78	91.099	ENSAOCG00000010671	-	95	84.052	Amphiprion_ocellaris
ENSPNAG00000022241	srsf1a	78	88.500	ENSAPEG00000023352	-	94	85.000	Amphiprion_percula
ENSPNAG00000022241	srsf1a	78	91.099	ENSAPEG00000009915	-	95	84.052	Amphiprion_percula
ENSPNAG00000022241	srsf1a	78	91.099	ENSATEG00000022403	-	77	91.099	Anabas_testudineus
ENSPNAG00000022241	srsf1a	82	88.500	ENSATEG00000021567	-	81	90.722	Anabas_testudineus
ENSPNAG00000022241	srsf1a	78	91.237	ENSACAG00000005542	-	94	94.017	Anolis_carolinensis
ENSPNAG00000022241	srsf1a	80	67.010	ENSANAG00000025417	-	93	70.563	Aotus_nancymaae
ENSPNAG00000022241	srsf1a	98	90.947	ENSANAG00000020583	-	95	95.652	Aotus_nancymaae
ENSPNAG00000022241	srsf1a	53	76.774	ENSAMXG00000024373	-	89	79.487	Astyanax_mexicanus
ENSPNAG00000022241	srsf1a	100	96.429	ENSAMXG00000035996	srsf1a	100	96.429	Astyanax_mexicanus
ENSPNAG00000022241	srsf1a	98	90.947	ENSBTAG00000014766	SRSF1	94	93.162	Bos_taurus
ENSPNAG00000022241	srsf1a	98	90.947	ENSCJAG00000041713	-	95	95.652	Callithrix_jacchus
ENSPNAG00000022241	srsf1a	78	84.536	ENSCJAG00000008111	-	86	86.082	Callithrix_jacchus
ENSPNAG00000022241	srsf1a	98	90.947	ENSCAFG00000017430	SRSF1	92	93.162	Canis_familiaris
ENSPNAG00000022241	srsf1a	98	90.947	ENSCAFG00020025632	-	92	93.162	Canis_lupus_dingo
ENSPNAG00000022241	srsf1a	78	90.206	ENSCHIG00000010787	SRSF1	94	93.162	Capra_hircus
ENSPNAG00000022241	srsf1a	98	90.947	ENSTSYG00000013899	-	95	95.652	Carlito_syrichta
ENSPNAG00000022241	srsf1a	98	90.947	ENSCPOG00000032681	-	94	93.162	Cavia_porcellus
ENSPNAG00000022241	srsf1a	98	90.947	ENSCCAG00000029484	-	95	95.652	Cebus_capucinus
ENSPNAG00000022241	srsf1a	98	90.947	ENSCATG00000042294	-	95	95.652	Cercocebus_atys
ENSPNAG00000022241	srsf1a	98	90.947	ENSCLAG00000014707	-	94	93.162	Chinchilla_lanigera
ENSPNAG00000022241	srsf1a	98	90.123	ENSCSAG00000005642	-	92	92.308	Chlorocebus_sabaeus
ENSPNAG00000022241	srsf1a	78	90.206	ENSCHOG00000001899	SRSF1	94	93.162	Choloepus_hoffmanni
ENSPNAG00000022241	srsf1a	98	92.181	ENSCPBG00000009851	-	94	94.444	Chrysemys_picta_bellii
ENSPNAG00000022241	srsf1a	98	90.947	ENSCANG00000029726	-	95	95.652	Colobus_angolensis_palliatus
ENSPNAG00000022241	srsf1a	98	90.947	ENSCGRG00001000670	Srsf1	92	93.162	Cricetulus_griseus_chok1gshd
ENSPNAG00000022241	srsf1a	98	90.947	ENSCGRG00000005590	Srsf1	94	93.162	Cricetulus_griseus_crigri
ENSPNAG00000022241	srsf1a	78	79.904	ENSCSEG00000009973	-	95	78.000	Cynoglossus_semilaevis
ENSPNAG00000022241	srsf1a	79	90.155	ENSCSEG00000014272	-	95	83.544	Cynoglossus_semilaevis
ENSPNAG00000022241	srsf1a	79	87.817	ENSCVAG00000005458	-	95	84.454	Cyprinodon_variegatus
ENSPNAG00000022241	srsf1a	78	91.099	ENSCVAG00000018617	-	95	84.052	Cyprinodon_variegatus
ENSPNAG00000022241	srsf1a	100	93.774	ENSDARG00000057691	srsf1a	100	93.774	Danio_rerio
ENSPNAG00000022241	srsf1a	79	92.857	ENSDARG00000017843	srsf1b	96	91.949	Danio_rerio
ENSPNAG00000022241	srsf1a	98	90.947	ENSDNOG00000011737	-	92	93.162	Dasypus_novemcinctus
ENSPNAG00000022241	srsf1a	98	90.947	ENSDORG00000015082	Srsf1	94	93.162	Dipodomys_ordii
ENSPNAG00000022241	srsf1a	73	89.503	ENSETEG00000005349	-	62	90.055	Echinops_telfairi
ENSPNAG00000022241	srsf1a	98	90.947	ENSEASG00005002922	-	92	93.162	Equus_asinus_asinus
ENSPNAG00000022241	srsf1a	78	90.206	ENSECAG00000016654	SRSF1	94	93.162	Equus_caballus
ENSPNAG00000022241	srsf1a	73	90.608	ENSEEUG00000009255	-	62	91.160	Erinaceus_europaeus
ENSPNAG00000022241	srsf1a	79	93.846	ENSELUG00000021646	srsf1a	78	93.333	Esox_lucius
ENSPNAG00000022241	srsf1a	98	90.947	ENSFCAG00000002250	-	92	93.162	Felis_catus
ENSPNAG00000022241	srsf1a	77	96.992	ENSFALG00000005062	-	92	77.778	Ficedula_albicollis
ENSPNAG00000022241	srsf1a	98	90.947	ENSFDAG00000010646	-	94	93.162	Fukomys_damarensis
ENSPNAG00000022241	srsf1a	78	91.099	ENSFHEG00000003174	srsf1a	95	84.052	Fundulus_heteroclitus
ENSPNAG00000022241	srsf1a	92	87.111	ENSGMOG00000014787	-	96	84.348	Gadus_morhua
ENSPNAG00000022241	srsf1a	78	91.753	ENSGALG00000005525	SRSF1	94	94.444	Gallus_gallus
ENSPNAG00000022241	srsf1a	78	87.435	ENSGACG00000020621	srsf1b	78	86.911	Gasterosteus_aculeatus
ENSPNAG00000022241	srsf1a	98	92.181	ENSGAGG00000022965	-	92	94.444	Gopherus_agassizii
ENSPNAG00000022241	srsf1a	98	90.947	ENSGGOG00000004386	SRSF1	95	95.652	Gorilla_gorilla
ENSPNAG00000022241	srsf1a	78	91.053	ENSHBUG00000016788	srsf1a	95	83.983	Haplochromis_burtoni
ENSPNAG00000022241	srsf1a	66	89.634	ENSHGLG00000000669	-	95	93.137	Heterocephalus_glaber_female
ENSPNAG00000022241	srsf1a	66	89.634	ENSHGLG00000000600	-	95	93.137	Heterocephalus_glaber_female
ENSPNAG00000022241	srsf1a	98	90.947	ENSHGLG00100016906	-	94	93.162	Heterocephalus_glaber_male
ENSPNAG00000022241	srsf1a	79	82.500	ENSHCOG00000018918	srsf1a	78	85.000	Hippocampus_comes
ENSPNAG00000022241	srsf1a	79	94.330	ENSIPUG00000008750	srsf1b	95	92.735	Ictalurus_punctatus
ENSPNAG00000022241	srsf1a	99	94.800	ENSIPUG00000017039	srsf1a	99	94.800	Ictalurus_punctatus
ENSPNAG00000022241	srsf1a	98	90.947	ENSSTOG00000000243	-	94	93.162	Ictidomys_tridecemlineatus
ENSPNAG00000022241	srsf1a	98	90.947	ENSJJAG00000000102	-	94	93.162	Jaculus_jaculus
ENSPNAG00000022241	srsf1a	50	86.992	ENSJJAG00000014464	-	93	88.710	Jaculus_jaculus
ENSPNAG00000022241	srsf1a	78	90.625	ENSKMAG00000019232	srsf1a	95	83.691	Kryptolebias_marmoratus
ENSPNAG00000022241	srsf1a	78	92.147	ENSLBEG00000020864	-	95	84.914	Labrus_bergylta
ENSPNAG00000022241	srsf1a	78	83.249	ENSLBEG00000015294	-	94	81.435	Labrus_bergylta
ENSPNAG00000022241	srsf1a	79	91.753	ENSLACG00000014160	srsf1a	88	92.275	Latimeria_chalumnae
ENSPNAG00000022241	srsf1a	78	93.264	ENSLOCG00000005994	srsf1a	94	93.991	Lepisosteus_oculatus
ENSPNAG00000022241	srsf1a	78	90.206	ENSLAFG00000025743	SRSF1	94	93.162	Loxodonta_africana
ENSPNAG00000022241	srsf1a	98	90.947	ENSMFAG00000040003	-	95	95.652	Macaca_fascicularis
ENSPNAG00000022241	srsf1a	99	88.115	ENSMMUG00000003260	-	93	88.601	Macaca_mulatta
ENSPNAG00000022241	srsf1a	98	90.947	ENSMMUG00000004725	SRSF1	95	95.652	Macaca_mulatta
ENSPNAG00000022241	srsf1a	98	90.947	ENSMNEG00000027680	-	95	95.652	Macaca_nemestrina
ENSPNAG00000022241	srsf1a	99	87.705	ENSMNEG00000015983	-	92	88.889	Macaca_nemestrina
ENSPNAG00000022241	srsf1a	78	90.206	ENSMLEG00000040509	SRSF1	94	93.162	Mandrillus_leucophaeus
ENSPNAG00000022241	srsf1a	98	90.000	ENSMLEG00000015243	-	92	90.043	Mandrillus_leucophaeus
ENSPNAG00000022241	srsf1a	78	94.301	ENSMAMG00000019691	-	95	89.270	Mastacembelus_armatus
ENSPNAG00000022241	srsf1a	78	91.099	ENSMAMG00000018454	-	95	84.052	Mastacembelus_armatus
ENSPNAG00000022241	srsf1a	78	91.623	ENSMAMG00000019687	-	94	87.446	Mastacembelus_armatus
ENSPNAG00000022241	srsf1a	98	90.947	ENSMAUG00000021845	Srsf1	94	93.162	Mesocricetus_auratus
ENSPNAG00000022241	srsf1a	98	90.947	ENSMICG00000013639	-	95	95.652	Microcebus_murinus
ENSPNAG00000022241	srsf1a	98	90.947	ENSMOCG00000001996	Srsf1	94	93.162	Microtus_ochrogaster
ENSPNAG00000022241	srsf1a	78	92.147	ENSMMOG00000014354	srsf1a	83	91.623	Mola_mola
ENSPNAG00000022241	srsf1a	73	91.758	ENSMODG00000014781	-	62	92.857	Monodelphis_domestica
ENSPNAG00000022241	srsf1a	81	79.293	ENSMALG00000007763	-	78	83.246	Monopterus_albus
ENSPNAG00000022241	srsf1a	78	90.576	ENSMALG00000017129	-	75	91.099	Monopterus_albus
ENSPNAG00000022241	srsf1a	98	90.947	MGP_CAROLIEiJ_G0016943	Srsf1	94	93.162	Mus_caroli
ENSPNAG00000022241	srsf1a	98	90.947	ENSMUSG00000018379	Srsf1	94	93.162	Mus_musculus
ENSPNAG00000022241	srsf1a	98	90.947	MGP_PahariEiJ_G0018074	Srsf1	94	93.162	Mus_pahari
ENSPNAG00000022241	srsf1a	98	90.947	MGP_SPRETEiJ_G0017790	Srsf1	94	93.162	Mus_spretus
ENSPNAG00000022241	srsf1a	78	90.206	ENSMPUG00000015369	SRSF1	94	93.162	Mustela_putorius_furo
ENSPNAG00000022241	srsf1a	78	90.206	ENSMLUG00000011040	SRSF1	94	93.162	Myotis_lucifugus
ENSPNAG00000022241	srsf1a	81	88.832	ENSMLUG00000023995	-	94	87.879	Myotis_lucifugus
ENSPNAG00000022241	srsf1a	78	90.206	ENSNGAG00000011395	Srsf1	94	93.162	Nannospalax_galili
ENSPNAG00000022241	srsf1a	99	79.098	ENSNBRG00000008041	srsf1b	78	82.723	Neolamprologus_brichardi
ENSPNAG00000022241	srsf1a	98	90.947	ENSNLEG00000008088	-	95	95.652	Nomascus_leucogenys
ENSPNAG00000022241	srsf1a	53	87.121	ENSOPRG00000001234	-	94	91.860	Ochotona_princeps
ENSPNAG00000022241	srsf1a	98	90.947	ENSODEG00000011481	-	94	93.162	Octodon_degus
ENSPNAG00000022241	srsf1a	95	90.129	ENSONIG00000004860	-	79	94.301	Oreochromis_niloticus
ENSPNAG00000022241	srsf1a	78	91.053	ENSONIG00000013160	-	94	83.983	Oreochromis_niloticus
ENSPNAG00000022241	srsf1a	99	70.204	ENSOCUG00000010894	-	75	73.936	Oryctolagus_cuniculus
ENSPNAG00000022241	srsf1a	78	91.099	ENSORLG00000004580	srsf1a	95	84.052	Oryzias_latipes
ENSPNAG00000022241	srsf1a	78	91.099	ENSORLG00020009456	srsf1a	95	84.052	Oryzias_latipes_hni
ENSPNAG00000022241	srsf1a	78	91.099	ENSORLG00015014384	srsf1a	83	91.099	Oryzias_latipes_hsok
ENSPNAG00000022241	srsf1a	71	89.655	ENSOMEG00000004106	srsf1a	71	89.655	Oryzias_melastigma
ENSPNAG00000022241	srsf1a	83	90.732	ENSOGAG00000025950	-	94	93.162	Otolemur_garnettii
ENSPNAG00000022241	srsf1a	78	89.529	ENSOARG00000008323	SRSF1	94	91.342	Ovis_aries
ENSPNAG00000022241	srsf1a	98	90.947	ENSPPAG00000043403	-	95	95.652	Pan_paniscus
ENSPNAG00000022241	srsf1a	98	90.947	ENSPPRG00000004238	-	94	93.162	Panthera_pardus
ENSPNAG00000022241	srsf1a	98	90.947	ENSPTRG00000049077	SRSF1	95	95.652	Pan_troglodytes
ENSPNAG00000022241	srsf1a	98	90.947	ENSPANG00000022305	-	95	95.652	Papio_anubis
ENSPNAG00000022241	srsf1a	99	73.663	ENSPANG00000030275	-	93	72.222	Papio_anubis
ENSPNAG00000022241	srsf1a	79	92.784	ENSPKIG00000007204	srsf1a	96	93.590	Paramormyrops_kingsleyae
ENSPNAG00000022241	srsf1a	78	93.782	ENSPKIG00000012857	srsf1b	94	92.275	Paramormyrops_kingsleyae
ENSPNAG00000022241	srsf1a	78	84.184	ENSPSIG00000009000	-	94	88.136	Pelodiscus_sinensis
ENSPNAG00000022241	srsf1a	78	89.474	ENSPMGG00000013112	-	95	81.590	Periophthalmus_magnuspinnatus
ENSPNAG00000022241	srsf1a	95	88.362	ENSPMGG00000005467	-	95	88.739	Periophthalmus_magnuspinnatus
ENSPNAG00000022241	srsf1a	98	90.947	ENSPEMG00000021416	Srsf1	94	93.162	Peromyscus_maniculatus_bairdii
ENSPNAG00000022241	srsf1a	78	90.256	ENSPCIG00000006076	-	94	93.191	Phascolarctos_cinereus
ENSPNAG00000022241	srsf1a	80	88.000	ENSPFOG00000018325	-	84	84.388	Poecilia_formosa
ENSPNAG00000022241	srsf1a	80	88.000	ENSPLAG00000008416	srsf1b	95	84.388	Poecilia_latipinna
ENSPNAG00000022241	srsf1a	80	88.000	ENSPMEG00000002388	-	95	84.388	Poecilia_mexicana
ENSPNAG00000022241	srsf1a	78	91.099	ENSPREG00000009667	srsf1a	95	84.052	Poecilia_reticulata
ENSPNAG00000022241	srsf1a	98	90.947	ENSPPYG00000008240	SRSF1	94	93.162	Pongo_abelii
ENSPNAG00000022241	srsf1a	78	90.206	ENSPCAG00000005199	SRSF1	94	93.162	Procavia_capensis
ENSPNAG00000022241	srsf1a	98	90.947	ENSPCOG00000023654	-	95	95.652	Propithecus_coquereli
ENSPNAG00000022241	srsf1a	79	73.869	ENSPCOG00000025736	-	93	73.980	Propithecus_coquereli
ENSPNAG00000022241	srsf1a	54	97.143	ENSPVAG00000000519	-	69	96.774	Pteropus_vampyrus
ENSPNAG00000022241	srsf1a	78	90.206	ENSRNOG00000050323	Srsf1	94	93.162	Rattus_norvegicus
ENSPNAG00000022241	srsf1a	98	90.947	ENSRBIG00000034445	-	95	95.652	Rhinopithecus_bieti
ENSPNAG00000022241	srsf1a	98	90.947	ENSRROG00000041506	-	95	95.652	Rhinopithecus_roxellana
ENSPNAG00000022241	srsf1a	98	90.947	ENSSBOG00000025377	-	95	95.652	Saimiri_boliviensis_boliviensis
ENSPNAG00000022241	srsf1a	78	90.256	ENSSHAG00000002552	-	94	93.191	Sarcophilus_harrisii
ENSPNAG00000022241	srsf1a	78	95.833	ENSSFOG00015004800	srsf1a	94	95.690	Scleropages_formosus
ENSPNAG00000022241	srsf1a	93	86.498	ENSSMAG00000009719	-	95	85.892	Scophthalmus_maximus
ENSPNAG00000022241	srsf1a	78	91.623	ENSSMAG00000007018	-	95	84.483	Scophthalmus_maximus
ENSPNAG00000022241	srsf1a	78	92.147	ENSSDUG00000011303	-	95	84.914	Seriola_dumerili
ENSPNAG00000022241	srsf1a	98	76.016	ENSSDUG00000003929	-	82	83.756	Seriola_dumerili
ENSPNAG00000022241	srsf1a	78	81.152	ENSSLDG00000016868	-	93	77.155	Seriola_lalandi_dorsalis
ENSPNAG00000022241	srsf1a	94	75.431	ENSSLDG00000016895	-	77	86.339	Seriola_lalandi_dorsalis
ENSPNAG00000022241	srsf1a	78	92.147	ENSSLDG00000010543	-	95	84.914	Seriola_lalandi_dorsalis
ENSPNAG00000022241	srsf1a	73	90.608	ENSSARG00000010949	-	62	91.160	Sorex_araneus
ENSPNAG00000022241	srsf1a	98	92.181	ENSSPUG00000000804	-	94	92.513	Sphenodon_punctatus
ENSPNAG00000022241	srsf1a	79	85.646	ENSSPAG00000014152	-	95	82.731	Stegastes_partitus
ENSPNAG00000022241	srsf1a	78	90.104	ENSSPAG00000022562	-	95	83.691	Stegastes_partitus
ENSPNAG00000022241	srsf1a	98	90.947	ENSSSCG00000017626	-	94	93.162	Sus_scrofa
ENSPNAG00000022241	srsf1a	53	89.474	ENSTGUG00000008416	-	94	93.642	Taeniopygia_guttata
ENSPNAG00000022241	srsf1a	78	90.576	ENSTRUG00000003691	srsf1a	95	83.621	Takifugu_rubripes
ENSPNAG00000022241	srsf1a	78	90.576	ENSTNIG00000016223	srsf1a	94	83.621	Tetraodon_nigroviridis
ENSPNAG00000022241	srsf1a	73	88.398	ENSTBEG00000015378	-	62	91.160	Tupaia_belangeri
ENSPNAG00000022241	srsf1a	53	87.121	ENSTTRG00000007310	SRSF1	94	91.860	Tursiops_truncatus
ENSPNAG00000022241	srsf1a	78	90.206	ENSUAMG00000009858	SRSF1	94	93.162	Ursus_americanus
ENSPNAG00000022241	srsf1a	98	90.947	ENSUMAG00000000455	-	92	93.162	Ursus_maritimus
ENSPNAG00000022241	srsf1a	78	89.691	ENSVPAG00000010094	SRSF1	94	92.735	Vicugna_pacos
ENSPNAG00000022241	srsf1a	98	90.947	ENSVVUG00000011882	-	92	93.162	Vulpes_vulpes
ENSPNAG00000022241	srsf1a	78	93.717	ENSXETG00000008954	srsf1	95	86.561	Xenopus_tropicalis
ENSPNAG00000022241	srsf1a	78	91.099	ENSXMAG00000011766	srsf1a	95	84.052	Xiphophorus_maculatus