EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000022270 (Gene tree)
Gene ID: 108429505
Gene Symbol: rtca
Alias: cb158|rtcd1|sb:cb158|wu:fc62c03
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 6186 bases
Position: chrKV575360.1:578866-585051
Accession: 108429505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000016158	RTC	PF01137.21	2.2e-86	1	1
ENSPNAP00000016158	RTC_insert	PF05189.13	1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000038012	-	2486	XM_017701278	ENSPNAP00000016158	364 (aa)	XP_017556767	UPI000814A478

Gene Model

Click here to download ENSPNAG00000022270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000022270's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000022270	rtca	100	73.224	ENSG00000137996	RTCA	100	73.224	Homo_sapiens
ENSPNAG00000022270	rtca	100	80.769	ENSAPOG00000001345	rtca	99	80.769	Acanthochromis_polyacanthus
ENSPNAG00000022270	rtca	73	74.349	ENSAMEG00000008855	RTCA	100	74.349	Ailuropoda_melanoleuca
ENSPNAG00000022270	rtca	100	79.945	ENSACIG00000019643	rtca	100	79.945	Amphilophus_citrinellus
ENSPNAG00000022270	rtca	100	80.220	ENSAOCG00000014979	rtca	99	80.220	Amphiprion_ocellaris
ENSPNAG00000022270	rtca	100	79.945	ENSAPEG00000006945	rtca	99	79.945	Amphiprion_percula
ENSPNAG00000022270	rtca	96	80.802	ENSATEG00000006315	rtca	96	80.802	Anabas_testudineus
ENSPNAG00000022270	rtca	96	69.972	ENSAPLG00000015430	RTCA	100	69.972	Anas_platyrhynchos
ENSPNAG00000022270	rtca	100	73.224	ENSANAG00000025446	RTCA	100	73.224	Aotus_nancymaae
ENSPNAG00000022270	rtca	100	80.769	ENSACLG00000020770	rtca	99	80.769	Astatotilapia_calliptera
ENSPNAG00000022270	rtca	100	92.582	ENSAMXG00000043271	rtca	100	92.582	Astyanax_mexicanus
ENSPNAG00000022270	rtca	100	73.770	ENSBTAG00000006321	RTCA	100	73.770	Bos_taurus
ENSPNAG00000022270	rtca	100	73.224	ENSCJAG00000003398	RTCA	100	73.224	Callithrix_jacchus
ENSPNAG00000022270	rtca	100	72.951	ENSCAFG00000020010	RTCA	68	72.951	Canis_familiaris
ENSPNAG00000022270	rtca	100	72.951	ENSCAFG00020011528	RTCA	57	72.951	Canis_lupus_dingo
ENSPNAG00000022270	rtca	100	73.497	ENSCHIG00000018937	RTCA	100	73.497	Capra_hircus
ENSPNAG00000022270	rtca	100	71.858	ENSTSYG00000011305	RTCA	100	71.858	Carlito_syrichta
ENSPNAG00000022270	rtca	100	73.770	ENSCCAG00000021844	RTCA	99	74.775	Cebus_capucinus
ENSPNAG00000022270	rtca	100	70.185	ENSCATG00000019364	RTCA	100	72.816	Cercocebus_atys
ENSPNAG00000022270	rtca	87	74.051	ENSCLAG00000006125	RTCA	100	74.051	Chinchilla_lanigera
ENSPNAG00000022270	rtca	100	72.951	ENSCSAG00000001509	RTCA	100	72.951	Chlorocebus_sabaeus
ENSPNAG00000022270	rtca	100	72.404	ENSCHOG00000005211	RTCA	100	72.404	Choloepus_hoffmanni
ENSPNAG00000022270	rtca	100	69.863	ENSCPBG00000026658	RTCA	100	69.863	Chrysemys_picta_bellii
ENSPNAG00000022270	rtca	99	54.945	ENSCING00000007875	-	99	54.945	Ciona_intestinalis
ENSPNAG00000022270	rtca	99	53.846	ENSCSAVG00000007269	-	99	53.846	Ciona_savignyi
ENSPNAG00000022270	rtca	100	72.678	ENSCANG00000040106	RTCA	100	72.678	Colobus_angolensis_palliatus
ENSPNAG00000022270	rtca	73	73.234	ENSCGRG00001013163	Rtca	85	73.234	Cricetulus_griseus_chok1gshd
ENSPNAG00000022270	rtca	99	76.309	ENSCSEG00000000530	rtca	98	76.309	Cynoglossus_semilaevis
ENSPNAG00000022270	rtca	100	65.385	ENSCVAG00000021809	rtca	100	65.385	Cyprinodon_variegatus
ENSPNAG00000022270	rtca	100	91.758	ENSDARG00000002215	rtca	100	91.758	Danio_rerio
ENSPNAG00000022270	rtca	100	72.131	ENSDNOG00000000456	RTCA	100	72.131	Dasypus_novemcinctus
ENSPNAG00000022270	rtca	100	71.585	ENSDORG00000005448	Rtca	100	71.585	Dipodomys_ordii
ENSPNAG00000022270	rtca	99	39.889	FBgn0025630	Rtca	99	39.889	Drosophila_melanogaster
ENSPNAG00000022270	rtca	95	53.736	ENSEBUG00000008556	rtca	96	53.736	Eptatretus_burgeri
ENSPNAG00000022270	rtca	100	72.951	ENSEASG00005015926	RTCA	100	72.951	Equus_asinus_asinus
ENSPNAG00000022270	rtca	100	72.951	ENSECAG00000019831	RTCA	100	72.951	Equus_caballus
ENSPNAG00000022270	rtca	91	65.896	ENSEEUG00000001165	RTCA	100	65.896	Erinaceus_europaeus
ENSPNAG00000022270	rtca	99	80.939	ENSELUG00000003741	rtca	99	80.939	Esox_lucius
ENSPNAG00000022270	rtca	100	73.224	ENSFCAG00000024460	RTCA	100	73.224	Felis_catus
ENSPNAG00000022270	rtca	91	71.471	ENSFALG00000002443	RTCA	90	71.471	Ficedula_albicollis
ENSPNAG00000022270	rtca	100	71.858	ENSFDAG00000012070	-	100	71.858	Fukomys_damarensis
ENSPNAG00000022270	rtca	98	57.735	ENSFDAG00000016084	-	100	57.735	Fukomys_damarensis
ENSPNAG00000022270	rtca	54	84.694	ENSFHEG00000002868	rtca	93	77.982	Fundulus_heteroclitus
ENSPNAG00000022270	rtca	100	80.495	ENSGMOG00000013264	rtca	100	80.495	Gadus_morhua
ENSPNAG00000022270	rtca	100	69.041	ENSGALG00000005277	RTCA	100	69.041	Gallus_gallus
ENSPNAG00000022270	rtca	100	77.473	ENSGAFG00000011853	rtca	99	77.473	Gambusia_affinis
ENSPNAG00000022270	rtca	100	76.923	ENSGACG00000013497	rtca	100	76.923	Gasterosteus_aculeatus
ENSPNAG00000022270	rtca	80	69.625	ENSGAGG00000023306	RTCA	100	69.625	Gopherus_agassizii
ENSPNAG00000022270	rtca	100	72.131	ENSGGOG00000044018	-	100	72.131	Gorilla_gorilla
ENSPNAG00000022270	rtca	100	72.678	ENSGGOG00000009546	-	100	72.816	Gorilla_gorilla
ENSPNAG00000022270	rtca	100	80.769	ENSHBUG00000002114	rtca	99	80.769	Haplochromis_burtoni
ENSPNAG00000022270	rtca	100	72.131	ENSHGLG00000002617	RTCA	100	72.131	Heterocephalus_glaber_female
ENSPNAG00000022270	rtca	100	72.131	ENSHGLG00100006056	RTCA	100	72.131	Heterocephalus_glaber_male
ENSPNAG00000022270	rtca	100	69.231	ENSHCOG00000020628	rtca	89	69.231	Hippocampus_comes
ENSPNAG00000022270	rtca	100	92.582	ENSIPUG00000024803	rtca	100	92.582	Ictalurus_punctatus
ENSPNAG00000022270	rtca	100	63.115	ENSSTOG00000033099	-	100	63.115	Ictidomys_tridecemlineatus
ENSPNAG00000022270	rtca	100	67.486	ENSSTOG00000013528	-	100	67.486	Ictidomys_tridecemlineatus
ENSPNAG00000022270	rtca	100	51.781	ENSJJAG00000016178	Rtca	100	51.781	Jaculus_jaculus
ENSPNAG00000022270	rtca	100	79.945	ENSKMAG00000006651	rtca	99	79.945	Kryptolebias_marmoratus
ENSPNAG00000022270	rtca	88	78.683	ENSLBEG00000002448	-	99	78.683	Labrus_bergylta
ENSPNAG00000022270	rtca	98	80.168	ENSLBEG00000028971	rtca	99	80.168	Labrus_bergylta
ENSPNAG00000022270	rtca	100	69.041	ENSLACG00000013666	RTCA	100	69.041	Latimeria_chalumnae
ENSPNAG00000022270	rtca	100	79.452	ENSLOCG00000000093	rtca	99	79.452	Lepisosteus_oculatus
ENSPNAG00000022270	rtca	100	71.038	ENSLAFG00000001473	RTCA	100	71.038	Loxodonta_africana
ENSPNAG00000022270	rtca	100	72.951	ENSMFAG00000034132	RTCA	100	72.951	Macaca_fascicularis
ENSPNAG00000022270	rtca	100	72.951	ENSMMUG00000019105	RTCA	100	72.951	Macaca_mulatta
ENSPNAG00000022270	rtca	84	73.139	ENSMNEG00000037163	RTCA	100	73.139	Macaca_nemestrina
ENSPNAG00000022270	rtca	100	60.383	ENSMLEG00000042151	RTCA	100	60.383	Mandrillus_leucophaeus
ENSPNAG00000022270	rtca	100	81.868	ENSMAMG00000016536	rtca	100	81.868	Mastacembelus_armatus
ENSPNAG00000022270	rtca	100	80.769	ENSMZEG00005017945	rtca	99	80.769	Maylandia_zebra
ENSPNAG00000022270	rtca	87	71.069	ENSMGAG00000006892	RTCA	99	71.069	Meleagris_gallopavo
ENSPNAG00000022270	rtca	100	71.585	ENSMAUG00000008488	Rtca	100	71.585	Mesocricetus_auratus
ENSPNAG00000022270	rtca	84	74.434	ENSMICG00000008643	RTCA	100	74.434	Microcebus_murinus
ENSPNAG00000022270	rtca	100	71.858	ENSMOCG00000016660	Rtca	100	71.858	Microtus_ochrogaster
ENSPNAG00000022270	rtca	84	80.456	ENSMMOG00000007750	rtca	100	80.456	Mola_mola
ENSPNAG00000022270	rtca	100	72.404	ENSMODG00000003557	RTCA	100	72.404	Monodelphis_domestica
ENSPNAG00000022270	rtca	100	80.495	ENSMALG00000020844	rtca	100	80.495	Monopterus_albus
ENSPNAG00000022270	rtca	100	70.765	MGP_CAROLIEiJ_G0025565	Rtca	100	73.239	Mus_caroli
ENSPNAG00000022270	rtca	100	70.219	ENSMUSG00000000339	Rtca	100	73.239	Mus_musculus
ENSPNAG00000022270	rtca	100	70.765	MGP_PahariEiJ_G0027011	Rtca	100	73.239	Mus_pahari
ENSPNAG00000022270	rtca	100	71.038	MGP_SPRETEiJ_G0026515	Rtca	100	73.944	Mus_spretus
ENSPNAG00000022270	rtca	100	73.224	ENSMPUG00000012119	RTCA	100	73.224	Mustela_putorius_furo
ENSPNAG00000022270	rtca	100	70.027	ENSMLUG00000009922	RTCA	100	70.027	Myotis_lucifugus
ENSPNAG00000022270	rtca	100	71.038	ENSNGAG00000011540	Rtca	99	71.038	Nannospalax_galili
ENSPNAG00000022270	rtca	100	80.769	ENSNBRG00000003062	rtca	99	80.769	Neolamprologus_brichardi
ENSPNAG00000022270	rtca	100	72.678	ENSNLEG00000031426	RTCA	100	72.678	Nomascus_leucogenys
ENSPNAG00000022270	rtca	73	70.260	ENSOPRG00000012092	RTCA	71	70.260	Ochotona_princeps
ENSPNAG00000022270	rtca	95	71.839	ENSODEG00000006990	RTCA	96	72.080	Octodon_degus
ENSPNAG00000022270	rtca	100	80.220	ENSONIG00000007753	rtca	99	80.220	Oreochromis_niloticus
ENSPNAG00000022270	rtca	87	71.609	ENSOANG00000012055	RTCA	98	71.609	Ornithorhynchus_anatinus
ENSPNAG00000022270	rtca	100	72.404	ENSOCUG00000014247	RTCA	100	72.404	Oryctolagus_cuniculus
ENSPNAG00000022270	rtca	100	79.670	ENSORLG00000013605	rtca	100	79.670	Oryzias_latipes
ENSPNAG00000022270	rtca	100	79.670	ENSORLG00020001904	rtca	100	79.670	Oryzias_latipes_hni
ENSPNAG00000022270	rtca	100	79.670	ENSORLG00015021064	rtca	100	79.670	Oryzias_latipes_hsok
ENSPNAG00000022270	rtca	100	78.846	ENSOMEG00000000756	rtca	100	78.846	Oryzias_melastigma
ENSPNAG00000022270	rtca	100	66.120	ENSOGAG00000005627	RTCA	100	66.120	Otolemur_garnettii
ENSPNAG00000022270	rtca	87	74.214	ENSOARG00000018122	RTCA	100	74.214	Ovis_aries
ENSPNAG00000022270	rtca	100	70.712	ENSPPAG00000035119	RTCA	100	73.463	Pan_paniscus
ENSPNAG00000022270	rtca	100	73.497	ENSPPRG00000000350	RTCA	100	73.497	Panthera_pardus
ENSPNAG00000022270	rtca	100	72.951	ENSPTIG00000012816	RTCA	100	72.951	Panthera_tigris_altaica
ENSPNAG00000022270	rtca	100	70.185	ENSPTRG00000001004	RTCA	100	72.816	Pan_troglodytes
ENSPNAG00000022270	rtca	100	72.678	ENSPANG00000000346	RTCA	100	72.678	Papio_anubis
ENSPNAG00000022270	rtca	100	86.538	ENSPKIG00000001653	rtca	100	86.538	Paramormyrops_kingsleyae
ENSPNAG00000022270	rtca	100	70.411	ENSPSIG00000011408	RTCA	100	70.411	Pelodiscus_sinensis
ENSPNAG00000022270	rtca	100	71.038	ENSPEMG00000018582	Rtca	100	71.038	Peromyscus_maniculatus_bairdii
ENSPNAG00000022270	rtca	98	56.389	ENSPMAG00000009110	rtca	98	56.389	Petromyzon_marinus
ENSPNAG00000022270	rtca	100	72.951	ENSPCIG00000007684	RTCA	100	72.951	Phascolarctos_cinereus
ENSPNAG00000022270	rtca	100	78.082	ENSPFOG00000004824	rtca	100	78.082	Poecilia_formosa
ENSPNAG00000022270	rtca	100	78.571	ENSPLAG00000011753	rtca	99	78.571	Poecilia_latipinna
ENSPNAG00000022270	rtca	100	78.571	ENSPMEG00000020469	rtca	99	78.571	Poecilia_mexicana
ENSPNAG00000022270	rtca	100	77.198	ENSPREG00000001365	rtca	99	77.198	Poecilia_reticulata
ENSPNAG00000022270	rtca	100	72.678	ENSPPYG00000001115	RTCA	100	72.678	Pongo_abelii
ENSPNAG00000022270	rtca	100	69.126	ENSPCAG00000005076	RTCA	100	69.126	Procavia_capensis
ENSPNAG00000022270	rtca	100	73.770	ENSPCOG00000005603	RTCA	100	73.770	Propithecus_coquereli
ENSPNAG00000022270	rtca	100	68.602	ENSPVAG00000009478	RTCA	100	68.602	Pteropus_vampyrus
ENSPNAG00000022270	rtca	100	80.769	ENSPNYG00000004722	rtca	99	80.769	Pundamilia_nyererei
ENSPNAG00000022270	rtca	100	70.765	ENSRNOG00000014575	Rtca	100	70.765	Rattus_norvegicus
ENSPNAG00000022270	rtca	100	70.185	ENSRBIG00000041180	RTCA	100	72.816	Rhinopithecus_bieti
ENSPNAG00000022270	rtca	100	72.678	ENSRROG00000024929	RTCA	100	72.678	Rhinopithecus_roxellana
ENSPNAG00000022270	rtca	100	72.678	ENSSBOG00000028626	RTCA	100	72.678	Saimiri_boliviensis_boliviensis
ENSPNAG00000022270	rtca	100	73.497	ENSSHAG00000001758	RTCA	100	73.497	Sarcophilus_harrisii
ENSPNAG00000022270	rtca	98	79.050	ENSSMAG00000014680	rtca	97	79.050	Scophthalmus_maximus
ENSPNAG00000022270	rtca	98	82.402	ENSSDUG00000015585	rtca	98	81.768	Seriola_dumerili
ENSPNAG00000022270	rtca	96	82.808	ENSSLDG00000018985	rtca	95	82.808	Seriola_lalandi_dorsalis
ENSPNAG00000022270	rtca	87	68.139	ENSSARG00000013993	RTCA	100	68.139	Sorex_araneus
ENSPNAG00000022270	rtca	100	79.121	ENSSPAG00000011938	rtca	99	79.121	Stegastes_partitus
ENSPNAG00000022270	rtca	100	72.404	ENSSSCG00000006865	RTCA	100	72.404	Sus_scrofa
ENSPNAG00000022270	rtca	100	70.959	ENSTGUG00000005154	RTCA	100	70.959	Taeniopygia_guttata
ENSPNAG00000022270	rtca	100	79.945	ENSTRUG00000008799	rtca	100	79.945	Takifugu_rubripes
ENSPNAG00000022270	rtca	100	78.846	ENSTNIG00000004725	rtca	100	78.846	Tetraodon_nigroviridis
ENSPNAG00000022270	rtca	57	59.615	ENSTBEG00000000943	RTCA	59	59.615	Tupaia_belangeri
ENSPNAG00000022270	rtca	100	70.712	ENSTTRG00000015327	RTCA	100	70.712	Tursiops_truncatus
ENSPNAG00000022270	rtca	95	71.264	ENSUAMG00000017265	RTCA	98	71.264	Ursus_americanus
ENSPNAG00000022270	rtca	100	72.404	ENSUMAG00000007881	RTCA	100	72.404	Ursus_maritimus
ENSPNAG00000022270	rtca	87	65.300	ENSVPAG00000001039	RTCA	84	65.300	Vicugna_pacos
ENSPNAG00000022270	rtca	100	72.951	ENSVVUG00000022041	RTCA	68	72.951	Vulpes_vulpes
ENSPNAG00000022270	rtca	99	58.516	ENSXETG00000031661	RTCA	99	58.516	Xenopus_tropicalis
ENSPNAG00000022270	rtca	100	67.033	ENSXCOG00000008002	rtca	100	67.033	Xiphophorus_couchianus
ENSPNAG00000022270	rtca	100	77.747	ENSXMAG00000005482	rtca	99	77.747	Xiphophorus_maculatus