EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000023094 (Gene tree)
Gene ID: 108412756
Gene Symbol: si:dkey-93h22.8
Alias: fc32h05|fi41c08|im:7140483|wu:fc32h05|wu:fi41c08
Full Name: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 11217 bases
Position: chrKV576303.1:5525-16741
Accession: 108412756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000034058	RRM_1	PF00076.22	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000025513	-	4498	XM_017684920	ENSPNAP00000034058	1106 (aa)	XP_017540409	-

Gene Model

Click here to download ENSPNAG00000023094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000023094	si:dkey-93h22.8	52	68.702	ENSAPOG00000001094	si:dkey-93h22.8	83	63.057	Acanthochromis_polyacanthus
ENSPNAG00000023094	si:dkey-93h22.8	52	69.697	ENSAOCG00000008140	si:dkey-93h22.8	72	63.694	Amphiprion_ocellaris
ENSPNAG00000023094	si:dkey-93h22.8	52	69.697	ENSAPEG00000014568	si:dkey-93h22.8	72	63.694	Amphiprion_percula
ENSPNAG00000023094	si:dkey-93h22.8	61	63.158	ENSACLG00000019359	-	57	63.158	Astatotilapia_calliptera
ENSPNAG00000023094	si:dkey-93h22.8	52	31.716	ENSACLG00000007927	pprc1	58	33.603	Astatotilapia_calliptera
ENSPNAG00000023094	si:dkey-93h22.8	71	64.640	ENSAMXG00000020783	si:dkey-93h22.8	78	64.303	Astyanax_mexicanus
ENSPNAG00000023094	si:dkey-93h22.8	57	70.370	ENSAMXG00000042630	pprc1	62	72.308	Astyanax_mexicanus
ENSPNAG00000023094	si:dkey-93h22.8	96	40.161	ENSDARG00000098666	si:dkey-93h22.8	91	72.000	Danio_rerio
ENSPNAG00000023094	si:dkey-93h22.8	67	62.025	ENSDARG00000090337	pprc1	64	62.025	Danio_rerio
ENSPNAG00000023094	si:dkey-93h22.8	52	31.599	ENSHBUG00000001258	pprc1	58	33.468	Haplochromis_burtoni
ENSPNAG00000023094	si:dkey-93h22.8	51	71.852	ENSIPUG00000007999	pprc1	52	71.852	Ictalurus_punctatus
ENSPNAG00000023094	si:dkey-93h22.8	78	67.424	ENSLBEG00000024075	-	85	55.114	Labrus_bergylta
ENSPNAG00000023094	si:dkey-93h22.8	52	31.716	ENSMZEG00005002989	pprc1	50	33.603	Maylandia_zebra
ENSPNAG00000023094	si:dkey-93h22.8	58	62.987	ENSMZEG00005008228	-	56	63.158	Maylandia_zebra
ENSPNAG00000023094	si:dkey-93h22.8	55	63.125	ENSMALG00000005052	-	54	63.125	Monopterus_albus
ENSPNAG00000023094	si:dkey-93h22.8	52	30.970	ENSONIG00000009509	pprc1	57	35.638	Oreochromis_niloticus
ENSPNAG00000023094	si:dkey-93h22.8	53	36.404	ENSORLG00000008410	pprc1	52	37.681	Oryzias_latipes
ENSPNAG00000023094	si:dkey-93h22.8	57	58.974	ENSORLG00000012355	si:dkey-93h22.8	65	58.125	Oryzias_latipes
ENSPNAG00000023094	si:dkey-93h22.8	78	58.974	ENSORLG00020004449	si:dkey-93h22.8	65	58.750	Oryzias_latipes_hni
ENSPNAG00000023094	si:dkey-93h22.8	61	59.006	ENSORLG00015002960	si:dkey-93h22.8	67	58.750	Oryzias_latipes_hsok
ENSPNAG00000023094	si:dkey-93h22.8	75	59.355	ENSOMEG00000012140	si:dkey-93h22.8	64	59.355	Oryzias_melastigma
ENSPNAG00000023094	si:dkey-93h22.8	50	71.212	ENSSMAG00000005915	si:dkey-93h22.8	56	64.331	Scophthalmus_maximus
ENSPNAG00000023094	si:dkey-93h22.8	55	63.924	ENSSDUG00000001268	si:dkey-93h22.8	55	63.924	Seriola_dumerili
ENSPNAG00000023094	si:dkey-93h22.8	55	63.924	ENSSLDG00000012010	si:dkey-93h22.8	56	63.924	Seriola_lalandi_dorsalis