EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000023109 (Gene tree)
Gene ID: 108432849
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 90257 bases
Position: chrKV575410.1:667046-757302
Accession: 108432849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000034075	Fox-1_C	PF12414.8	3.9e-43	1	1
ENSPNAP00000034075	RRM_1	PF00076.22	3.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000025552	-	3302	XM_017706966	ENSPNAP00000034075	369 (aa)	XP_017562455	-

Gene Model

Click here to download ENSPNAG00000023109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000023109	rbfox1	89	56.798	ENSPNAG00000018173	rbfox3b	90	56.627
ENSPNAG00000023109	rbfox1	96	66.111	ENSPNAG00000002889	rbfox3a	85	70.238
ENSPNAG00000023109	rbfox1	81	57.716	ENSPNAG00000001620	rbfox1l	95	51.134
ENSPNAG00000023109	rbfox1	76	62.252	ENSPNAG00000014196	-	62	65.493
ENSPNAG00000023109	rbfox1	96	47.520	ENSPNAG00000000168	rbfox2	71	49.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000023109	rbfox1	100	87.838	ENSG00000078328	RBFOX1	95	87.838	Homo_sapiens
ENSPNAG00000023109	rbfox1	100	79.793	ENSAPOG00000003197	rbfox1	95	80.311	Acanthochromis_polyacanthus
ENSPNAG00000023109	rbfox1	61	81.250	ENSAMEG00000008605	RBFOX1	82	81.250	Ailuropoda_melanoleuca
ENSPNAG00000023109	rbfox1	65	73.234	ENSACIG00000005478	rbfox1	68	73.234	Amphilophus_citrinellus
ENSPNAG00000023109	rbfox1	73	73.776	ENSAOCG00000008283	rbfox1	91	74.476	Amphiprion_ocellaris
ENSPNAG00000023109	rbfox1	100	68.299	ENSAPEG00000010636	rbfox1	100	67.436	Amphiprion_percula
ENSPNAG00000023109	rbfox1	73	72.222	ENSATEG00000007513	rbfox1	91	72.917	Anabas_testudineus
ENSPNAG00000023109	rbfox1	100	82.323	ENSAPLG00000013263	RBFOX1	94	82.323	Anas_platyrhynchos
ENSPNAG00000023109	rbfox1	100	78.947	ENSACAG00000004013	RBFOX1	95	78.947	Anolis_carolinensis
ENSPNAG00000023109	rbfox1	100	87.838	ENSANAG00000029527	RBFOX1	93	87.838	Aotus_nancymaae
ENSPNAG00000023109	rbfox1	61	90.625	ENSAMXG00000002431	rbfox1	60	90.625	Astyanax_mexicanus
ENSPNAG00000023109	rbfox1	100	78.338	ENSBTAG00000007210	RBFOX1	95	78.338	Bos_taurus
ENSPNAG00000023109	rbfox1	100	85.445	ENSCJAG00000017351	RBFOX1	90	85.445	Callithrix_jacchus
ENSPNAG00000023109	rbfox1	100	79.597	ENSCAFG00000019082	RBFOX1	90	79.597	Canis_familiaris
ENSPNAG00000023109	rbfox1	67	76.000	ENSCAFG00020024881	RBFOX1	72	76.000	Canis_lupus_dingo
ENSPNAG00000023109	rbfox1	100	78.841	ENSCHIG00000023549	RBFOX1	95	78.841	Capra_hircus
ENSPNAG00000023109	rbfox1	100	86.992	ENSTSYG00000005334	RBFOX1	97	86.992	Carlito_syrichta
ENSPNAG00000023109	rbfox1	100	80.303	ENSCAPG00000017669	RBFOX1	97	80.303	Cavia_aperea
ENSPNAG00000023109	rbfox1	100	80.303	ENSCPOG00000011314	RBFOX1	96	80.303	Cavia_porcellus
ENSPNAG00000023109	rbfox1	100	87.838	ENSCCAG00000023031	RBFOX1	93	87.838	Cebus_capucinus
ENSPNAG00000023109	rbfox1	100	87.838	ENSCATG00000033816	RBFOX1	93	87.838	Cercocebus_atys
ENSPNAG00000023109	rbfox1	100	80.605	ENSCLAG00000012761	RBFOX1	95	80.605	Chinchilla_lanigera
ENSPNAG00000023109	rbfox1	84	77.876	ENSCSAG00000008739	RBFOX1	85	77.876	Chlorocebus_sabaeus
ENSPNAG00000023109	rbfox1	73	90.769	ENSCHOG00000012843	RBFOX1	60	90.769	Choloepus_hoffmanni
ENSPNAG00000023109	rbfox1	100	88.618	ENSCPBG00000026626	RBFOX1	95	80.353	Chrysemys_picta_bellii
ENSPNAG00000023109	rbfox1	100	87.838	ENSCANG00000033125	RBFOX1	93	87.838	Colobus_angolensis_palliatus
ENSPNAG00000023109	rbfox1	100	81.061	ENSCGRG00001013729	Rbfox1	95	81.061	Cricetulus_griseus_chok1gshd
ENSPNAG00000023109	rbfox1	100	81.061	ENSCGRG00000003272	Rbfox1	95	81.061	Cricetulus_griseus_crigri
ENSPNAG00000023109	rbfox1	100	74.293	ENSCSEG00000008840	rbfox1	100	73.522	Cynoglossus_semilaevis
ENSPNAG00000023109	rbfox1	100	87.838	ENSDARG00000014746	rbfox1	95	88.108	Danio_rerio
ENSPNAG00000023109	rbfox1	100	81.313	ENSDNOG00000043612	RBFOX1	91	81.313	Dasypus_novemcinctus
ENSPNAG00000023109	rbfox1	100	77.444	ENSDORG00000010024	Rbfox1	94	78.697	Dipodomys_ordii
ENSPNAG00000023109	rbfox1	100	67.254	ENSETEG00000003771	RBFOX1	90	67.254	Echinops_telfairi
ENSPNAG00000023109	rbfox1	100	81.061	ENSEASG00005011599	RBFOX1	95	79.093	Equus_asinus_asinus
ENSPNAG00000023109	rbfox1	100	79.947	ENSECAG00000012667	RBFOX1	88	78.646	Equus_caballus
ENSPNAG00000023109	rbfox1	77	75.701	ENSELUG00000013096	rbfox1	92	75.234	Esox_lucius
ENSPNAG00000023109	rbfox1	100	87.534	ENSFCAG00000025322	RBFOX1	86	87.534	Felis_catus
ENSPNAG00000023109	rbfox1	82	80.000	ENSFALG00000004027	RBFOX1	93	80.000	Ficedula_albicollis
ENSPNAG00000023109	rbfox1	100	80.808	ENSFDAG00000007388	RBFOX1	95	80.808	Fukomys_damarensis
ENSPNAG00000023109	rbfox1	100	79.597	ENSGALG00000034325	RBFOX1	90	79.597	Gallus_gallus
ENSPNAG00000023109	rbfox1	100	86.216	ENSGAGG00000023681	RBFOX1	100	82.071	Gopherus_agassizii
ENSPNAG00000023109	rbfox1	100	87.838	ENSGGOG00000016871	-	93	87.838	Gorilla_gorilla
ENSPNAG00000023109	rbfox1	100	80.556	ENSHGLG00000016944	RBFOX1	95	80.556	Heterocephalus_glaber_female
ENSPNAG00000023109	rbfox1	100	80.556	ENSHGLG00100003272	RBFOX1	95	80.556	Heterocephalus_glaber_male
ENSPNAG00000023109	rbfox1	89	73.746	ENSHCOG00000016419	rbfox1	91	74.194	Hippocampus_comes
ENSPNAG00000023109	rbfox1	100	91.599	ENSIPUG00000015215	rbfox1	100	91.599	Ictalurus_punctatus
ENSPNAG00000023109	rbfox1	100	80.556	ENSSTOG00000000322	RBFOX1	96	80.556	Ictidomys_tridecemlineatus
ENSPNAG00000023109	rbfox1	100	79.293	ENSJJAG00000002575	Rbfox1	95	79.293	Jaculus_jaculus
ENSPNAG00000023109	rbfox1	97	76.471	ENSLBEG00000014659	rbfox1	93	77.688	Labrus_bergylta
ENSPNAG00000023109	rbfox1	100	82.206	ENSLOCG00000006675	rbfox1	95	82.206	Lepisosteus_oculatus
ENSPNAG00000023109	rbfox1	76	85.714	ENSLAFG00000011480	RBFOX1	100	85.714	Loxodonta_africana
ENSPNAG00000023109	rbfox1	100	87.568	ENSMFAG00000036447	RBFOX1	93	87.568	Macaca_fascicularis
ENSPNAG00000023109	rbfox1	100	87.568	ENSMMUG00000003458	RBFOX1	93	87.568	Macaca_mulatta
ENSPNAG00000023109	rbfox1	100	79.397	ENSMNEG00000032034	RBFOX1	90	79.397	Macaca_nemestrina
ENSPNAG00000023109	rbfox1	100	87.838	ENSMLEG00000015382	RBFOX1	93	87.838	Mandrillus_leucophaeus
ENSPNAG00000023109	rbfox1	100	77.604	ENSMAMG00000003142	rbfox1	100	77.344	Mastacembelus_armatus
ENSPNAG00000023109	rbfox1	71	77.778	ENSMGAG00000008606	RBFOX1	91	77.385	Meleagris_gallopavo
ENSPNAG00000023109	rbfox1	100	47.917	ENSMAUG00000020570	Rbfox1	94	47.396	Mesocricetus_auratus
ENSPNAG00000023109	rbfox1	100	87.838	ENSMICG00000034286	RBFOX1	93	87.838	Microcebus_murinus
ENSPNAG00000023109	rbfox1	100	81.061	ENSMOCG00000020932	Rbfox1	98	81.061	Microtus_ochrogaster
ENSPNAG00000023109	rbfox1	89	76.133	ENSMMOG00000009716	rbfox1	86	75.227	Mola_mola
ENSPNAG00000023109	rbfox1	84	78.994	ENSMODG00000005826	RBFOX1	90	78.994	Monodelphis_domestica
ENSPNAG00000023109	rbfox1	100	80.000	ENSMALG00000003337	rbfox1	94	78.364	Monopterus_albus
ENSPNAG00000023109	rbfox1	100	81.313	MGP_CAROLIEiJ_G0020427	Rbfox1	95	81.313	Mus_caroli
ENSPNAG00000023109	rbfox1	100	82.275	ENSMUSG00000008658	Rbfox1	99	87.879	Mus_musculus
ENSPNAG00000023109	rbfox1	100	81.313	MGP_PahariEiJ_G0016135	Rbfox1	95	81.313	Mus_pahari
ENSPNAG00000023109	rbfox1	100	80.808	MGP_SPRETEiJ_G0021321	Rbfox1	95	80.808	Mus_spretus
ENSPNAG00000023109	rbfox1	84	77.515	ENSMPUG00000014822	RBFOX1	81	77.515	Mustela_putorius_furo
ENSPNAG00000023109	rbfox1	76	85.993	ENSMLUG00000015896	RBFOX1	100	85.993	Myotis_lucifugus
ENSPNAG00000023109	rbfox1	100	81.061	ENSNGAG00000023276	Rbfox1	97	81.061	Nannospalax_galili
ENSPNAG00000023109	rbfox1	100	61.179	ENSNBRG00000011084	rbfox1	91	60.837	Neolamprologus_brichardi
ENSPNAG00000023109	rbfox1	100	87.568	ENSNLEG00000010017	-	93	87.568	Nomascus_leucogenys
ENSPNAG00000023109	rbfox1	78	93.846	ENSMEUG00000012525	RBFOX1	65	93.846	Notamacropus_eugenii
ENSPNAG00000023109	rbfox1	88	82.143	ENSOPRG00000006199	-	73	82.143	Ochotona_princeps
ENSPNAG00000023109	rbfox1	100	79.798	ENSODEG00000013166	RBFOX1	95	79.798	Octodon_degus
ENSPNAG00000023109	rbfox1	84	78.994	ENSOANG00000002379	RBFOX1	85	78.994	Ornithorhynchus_anatinus
ENSPNAG00000023109	rbfox1	61	81.696	ENSOCUG00000001205	-	91	81.696	Oryctolagus_cuniculus
ENSPNAG00000023109	rbfox1	100	81.360	ENSOGAG00000025535	RBFOX1	95	81.360	Otolemur_garnettii
ENSPNAG00000023109	rbfox1	61	70.089	ENSOARG00000005135	RBFOX1	79	70.089	Ovis_aries
ENSPNAG00000023109	rbfox1	100	87.838	ENSPPAG00000036238	-	97	87.838	Pan_paniscus
ENSPNAG00000023109	rbfox1	100	87.534	ENSPPRG00000006546	RBFOX1	93	87.534	Panthera_pardus
ENSPNAG00000023109	rbfox1	100	74.801	ENSPTIG00000021154	RBFOX1	96	74.400	Panthera_tigris_altaica
ENSPNAG00000023109	rbfox1	100	87.838	ENSPTRG00000007744	RBFOX1	93	87.838	Pan_troglodytes
ENSPNAG00000023109	rbfox1	100	87.838	ENSPANG00000026500	RBFOX1	93	87.838	Papio_anubis
ENSPNAG00000023109	rbfox1	73	85.978	ENSPKIG00000019353	rbfox1	82	85.978	Paramormyrops_kingsleyae
ENSPNAG00000023109	rbfox1	100	86.523	ENSPKIG00000009667	-	95	85.556	Paramormyrops_kingsleyae
ENSPNAG00000023109	rbfox1	100	82.323	ENSPSIG00000006523	RBFOX1	94	82.323	Pelodiscus_sinensis
ENSPNAG00000023109	rbfox1	100	81.313	ENSPEMG00000017607	Rbfox1	95	81.313	Peromyscus_maniculatus_bairdii
ENSPNAG00000023109	rbfox1	71	82.414	ENSPCIG00000026887	RBFOX1	100	82.414	Phascolarctos_cinereus
ENSPNAG00000023109	rbfox1	84	77.876	ENSPPYG00000007079	-	81	77.876	Pongo_abelii
ENSPNAG00000023109	rbfox1	89	70.028	ENSPCAG00000002630	RBFOX1	89	70.028	Procavia_capensis
ENSPNAG00000023109	rbfox1	100	87.838	ENSPCOG00000025687	RBFOX1	93	87.838	Propithecus_coquereli
ENSPNAG00000023109	rbfox1	100	75.063	ENSPVAG00000013467	RBFOX1	90	75.063	Pteropus_vampyrus
ENSPNAG00000023109	rbfox1	100	81.061	ENSRNOG00000002827	Rbfox1	90	81.061	Rattus_norvegicus
ENSPNAG00000023109	rbfox1	100	87.838	ENSRBIG00000044478	RBFOX1	97	87.838	Rhinopithecus_bieti
ENSPNAG00000023109	rbfox1	100	87.838	ENSRROG00000044411	RBFOX1	93	87.838	Rhinopithecus_roxellana
ENSPNAG00000023109	rbfox1	100	87.297	ENSSBOG00000033726	RBFOX1	93	87.297	Saimiri_boliviensis_boliviensis
ENSPNAG00000023109	rbfox1	100	82.576	ENSSHAG00000009257	RBFOX1	95	82.576	Sarcophilus_harrisii
ENSPNAG00000023109	rbfox1	89	74.474	ENSSFOG00015009955	-	80	74.474	Scleropages_formosus
ENSPNAG00000023109	rbfox1	100	73.171	ENSSFOG00015023675	rbfox1	94	72.900	Scleropages_formosus
ENSPNAG00000023109	rbfox1	100	79.740	ENSSMAG00000015505	rbfox1	89	79.481	Scophthalmus_maximus
ENSPNAG00000023109	rbfox1	100	77.151	ENSSDUG00000016413	rbfox1	95	76.882	Seriola_dumerili
ENSPNAG00000023109	rbfox1	89	74.398	ENSSLDG00000009353	rbfox1	91	74.593	Seriola_lalandi_dorsalis
ENSPNAG00000023109	rbfox1	89	83.333	ENSSPUG00000009732	RBFOX1	87	83.333	Sphenodon_punctatus
ENSPNAG00000023109	rbfox1	100	78.756	ENSSPAG00000009723	rbfox1	97	79.275	Stegastes_partitus
ENSPNAG00000023109	rbfox1	96	79.896	ENSSSCG00000007917	RBFOX1	88	79.896	Sus_scrofa
ENSPNAG00000023109	rbfox1	100	82.323	ENSTGUG00000004562	RBFOX1	97	82.323	Taeniopygia_guttata
ENSPNAG00000023109	rbfox1	100	79.948	ENSTRUG00000020940	rbfox1	96	79.948	Takifugu_rubripes
ENSPNAG00000023109	rbfox1	65	65.157	ENSTNIG00000002567	rbfox1	100	67.247	Tetraodon_nigroviridis
ENSPNAG00000023109	rbfox1	64	94.815	ENSTBEG00000009169	-	56	94.815	Tupaia_belangeri
ENSPNAG00000023109	rbfox1	100	78.338	ENSTTRG00000005700	RBFOX1	90	78.338	Tursiops_truncatus
ENSPNAG00000023109	rbfox1	100	76.984	ENSUAMG00000024633	RBFOX1	100	77.778	Ursus_americanus
ENSPNAG00000023109	rbfox1	100	72.296	ENSUMAG00000003579	RBFOX1	95	72.727	Ursus_maritimus
ENSPNAG00000023109	rbfox1	76	83.117	ENSVPAG00000001284	RBFOX1	74	83.117	Vicugna_pacos
ENSPNAG00000023109	rbfox1	100	87.805	ENSVVUG00000017311	RBFOX1	86	87.805	Vulpes_vulpes