EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000023151 (Gene tree)
Gene ID: 108441743
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 9078 bases
Position: chrKV575286.1:8040563-8049640
Accession: 108441743
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000034088	PRP4	PF08799.11	2e-13	1	1
ENSPNAP00000034088	Prp18	PF02840.15	3.4e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000025575	-	2336	XM_017721465	ENSPNAP00000034088	351 (aa)	XP_017576954	UPI000814B3EA

Gene Model

Click here to download ENSPNAG00000023151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023151's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000023151	prpf18	100	85.470	ENSG00000165630	PRPF18	100	85.470	Homo_sapiens
ENSPNAG00000023151	prpf18	100	89.459	ENSAPOG00000024177	prpf18	100	89.459	Acanthochromis_polyacanthus
ENSPNAG00000023151	prpf18	100	84.900	ENSAMEG00000013591	-	100	84.900	Ailuropoda_melanoleuca
ENSPNAG00000023151	prpf18	100	87.464	ENSACIG00000001186	prpf18	100	87.464	Amphilophus_citrinellus
ENSPNAG00000023151	prpf18	98	89.535	ENSAOCG00000006572	prpf18	94	89.504	Amphiprion_ocellaris
ENSPNAG00000023151	prpf18	100	89.744	ENSAPEG00000004564	prpf18	100	89.744	Amphiprion_percula
ENSPNAG00000023151	prpf18	100	87.179	ENSATEG00000000303	prpf18	100	87.179	Anabas_testudineus
ENSPNAG00000023151	prpf18	99	84.241	ENSAPLG00000003387	-	99	84.241	Anas_platyrhynchos
ENSPNAG00000023151	prpf18	100	84.330	ENSACAG00000000818	-	100	84.419	Anolis_carolinensis
ENSPNAG00000023151	prpf18	100	85.470	ENSANAG00000037445	-	100	85.470	Aotus_nancymaae
ENSPNAG00000023151	prpf18	100	87.464	ENSACLG00000026296	prpf18	100	87.464	Astatotilapia_calliptera
ENSPNAG00000023151	prpf18	100	94.302	ENSAMXG00000012848	prpf18	100	94.302	Astyanax_mexicanus
ENSPNAG00000023151	prpf18	100	84.615	ENSBTAG00000017244	PRPF18	100	84.615	Bos_taurus
ENSPNAG00000023151	prpf18	98	41.261	WBGene00009320	F32B6.3	97	41.261	Caenorhabditis_elegans
ENSPNAG00000023151	prpf18	100	85.470	ENSCJAG00000009432	-	100	85.470	Callithrix_jacchus
ENSPNAG00000023151	prpf18	100	84.900	ENSCAFG00000004735	-	100	84.900	Canis_familiaris
ENSPNAG00000023151	prpf18	100	84.900	ENSCAFG00020007712	-	100	84.900	Canis_lupus_dingo
ENSPNAG00000023151	prpf18	100	84.615	ENSCHIG00000000499	-	100	84.615	Capra_hircus
ENSPNAG00000023151	prpf18	100	84.615	ENSTSYG00000003517	-	100	84.615	Carlito_syrichta
ENSPNAG00000023151	prpf18	100	85.470	ENSCPOG00000021069	-	100	85.470	Cavia_porcellus
ENSPNAG00000023151	prpf18	100	85.470	ENSCCAG00000036822	-	100	85.470	Cebus_capucinus
ENSPNAG00000023151	prpf18	100	74.929	ENSCATG00000016633	-	100	74.929	Cercocebus_atys
ENSPNAG00000023151	prpf18	100	85.470	ENSCLAG00000011770	-	100	85.470	Chinchilla_lanigera
ENSPNAG00000023151	prpf18	100	85.470	ENSCSAG00000013109	-	100	85.470	Chlorocebus_sabaeus
ENSPNAG00000023151	prpf18	100	81.370	ENSCPBG00000003100	-	100	81.918	Chrysemys_picta_bellii
ENSPNAG00000023151	prpf18	99	54.598	ENSCING00000020481	-	97	53.143	Ciona_intestinalis
ENSPNAG00000023151	prpf18	99	54.023	ENSCSAVG00000010546	-	99	53.448	Ciona_savignyi
ENSPNAG00000023151	prpf18	100	85.755	ENSCANG00000034900	-	100	85.755	Colobus_angolensis_palliatus
ENSPNAG00000023151	prpf18	100	85.470	ENSCGRG00001023665	Prpf18	100	85.470	Cricetulus_griseus_chok1gshd
ENSPNAG00000023151	prpf18	100	85.470	ENSCGRG00000014690	Prpf18	100	85.470	Cricetulus_griseus_crigri
ENSPNAG00000023151	prpf18	100	86.040	ENSCSEG00000005536	prpf18	99	86.040	Cynoglossus_semilaevis
ENSPNAG00000023151	prpf18	100	87.179	ENSCVAG00000012401	prpf18	100	87.179	Cyprinodon_variegatus
ENSPNAG00000023151	prpf18	100	93.732	ENSDARG00000058306	prpf18	100	93.732	Danio_rerio
ENSPNAG00000023151	prpf18	100	84.900	ENSDNOG00000035607	-	100	84.900	Dasypus_novemcinctus
ENSPNAG00000023151	prpf18	100	84.615	ENSDORG00000000858	Prpf18	100	84.615	Dipodomys_ordii
ENSPNAG00000023151	prpf18	99	51.437	FBgn0027784	Prp18	98	51.437	Drosophila_melanogaster
ENSPNAG00000023151	prpf18	100	76.638	ENSETEG00000015060	-	100	76.638	Echinops_telfairi
ENSPNAG00000023151	prpf18	100	68.946	ENSEBUG00000016502	prpf18	99	68.091	Eptatretus_burgeri
ENSPNAG00000023151	prpf18	100	85.185	ENSEASG00005019373	-	100	85.185	Equus_asinus_asinus
ENSPNAG00000023151	prpf18	100	85.185	ENSECAG00000006997	PRPF18	100	85.185	Equus_caballus
ENSPNAG00000023151	prpf18	74	100.000	ENSEEUG00000001171	-	79	100.000	Erinaceus_europaeus
ENSPNAG00000023151	prpf18	100	88.068	ENSELUG00000022190	prpf18	100	88.068	Esox_lucius
ENSPNAG00000023151	prpf18	100	84.900	ENSFCAG00000004436	-	100	84.900	Felis_catus
ENSPNAG00000023151	prpf18	93	83.692	ENSFALG00000001912	-	97	83.692	Ficedula_albicollis
ENSPNAG00000023151	prpf18	99	57.714	ENSFDAG00000010713	-	97	57.714	Fukomys_damarensis
ENSPNAG00000023151	prpf18	94	86.930	ENSFDAG00000014026	-	100	86.930	Fukomys_damarensis
ENSPNAG00000023151	prpf18	78	91.575	ENSFHEG00000020125	prpf18	98	91.386	Fundulus_heteroclitus
ENSPNAG00000023151	prpf18	99	84.286	ENSGMOG00000012210	prpf18	99	84.286	Gadus_morhua
ENSPNAG00000023151	prpf18	100	85.470	ENSGALG00000043593	-	100	85.470	Gallus_gallus
ENSPNAG00000023151	prpf18	100	85.755	ENSGAFG00000006034	prpf18	100	85.755	Gambusia_affinis
ENSPNAG00000023151	prpf18	100	84.330	ENSGACG00000012232	prpf18	100	84.330	Gasterosteus_aculeatus
ENSPNAG00000023151	prpf18	100	84.615	ENSGAGG00000016878	-	100	84.615	Gopherus_agassizii
ENSPNAG00000023151	prpf18	93	84.308	ENSGGOG00000025188	-	96	84.308	Gorilla_gorilla
ENSPNAG00000023151	prpf18	100	88.889	ENSHBUG00000010264	prpf18	100	88.889	Haplochromis_burtoni
ENSPNAG00000023151	prpf18	100	84.900	ENSHGLG00000018534	PRPF18	100	84.900	Heterocephalus_glaber_female
ENSPNAG00000023151	prpf18	94	86.626	ENSHGLG00100012161	-	98	86.626	Heterocephalus_glaber_male
ENSPNAG00000023151	prpf18	100	88.604	ENSHCOG00000015987	prpf18	100	88.604	Hippocampus_comes
ENSPNAG00000023151	prpf18	100	86.969	ENSIPUG00000007432	prpf18	100	87.819	Ictalurus_punctatus
ENSPNAG00000023151	prpf18	100	84.046	ENSSTOG00000008735	-	100	84.046	Ictidomys_tridecemlineatus
ENSPNAG00000023151	prpf18	100	63.352	ENSJJAG00000015191	-	100	63.352	Jaculus_jaculus
ENSPNAG00000023151	prpf18	100	85.470	ENSJJAG00000024041	-	100	85.470	Jaculus_jaculus
ENSPNAG00000023151	prpf18	100	87.749	ENSKMAG00000012124	prpf18	100	87.749	Kryptolebias_marmoratus
ENSPNAG00000023151	prpf18	100	81.766	ENSLBEG00000028466	prpf18	100	81.766	Labrus_bergylta
ENSPNAG00000023151	prpf18	100	86.325	ENSLACG00000009885	prpf18	100	86.325	Latimeria_chalumnae
ENSPNAG00000023151	prpf18	100	90.028	ENSLOCG00000016736	prpf18	100	90.028	Lepisosteus_oculatus
ENSPNAG00000023151	prpf18	100	85.470	ENSLAFG00000007753	-	100	85.470	Loxodonta_africana
ENSPNAG00000023151	prpf18	100	85.470	ENSMFAG00000000540	-	100	85.470	Macaca_fascicularis
ENSPNAG00000023151	prpf18	100	85.470	ENSMMUG00000015071	PRPF18	93	94.702	Macaca_mulatta
ENSPNAG00000023151	prpf18	100	85.470	ENSMNEG00000024679	-	100	85.470	Macaca_nemestrina
ENSPNAG00000023151	prpf18	100	70.655	ENSMLEG00000031715	-	100	70.655	Mandrillus_leucophaeus
ENSPNAG00000023151	prpf18	100	89.174	ENSMAMG00000006610	prpf18	100	89.174	Mastacembelus_armatus
ENSPNAG00000023151	prpf18	100	88.889	ENSMZEG00005019392	prpf18	100	88.889	Maylandia_zebra
ENSPNAG00000023151	prpf18	100	85.185	ENSMGAG00000005023	-	100	85.185	Meleagris_gallopavo
ENSPNAG00000023151	prpf18	100	85.185	ENSMICG00000006572	-	100	85.185	Microcebus_murinus
ENSPNAG00000023151	prpf18	100	85.470	ENSMOCG00000021468	Prpf18	100	85.470	Microtus_ochrogaster
ENSPNAG00000023151	prpf18	100	86.040	ENSMMOG00000013012	prpf18	100	86.040	Mola_mola
ENSPNAG00000023151	prpf18	100	76.638	ENSMODG00000024043	-	100	76.638	Monodelphis_domestica
ENSPNAG00000023151	prpf18	96	81.657	ENSMODG00000016902	-	92	81.657	Monodelphis_domestica
ENSPNAG00000023151	prpf18	100	80.627	ENSMALG00000005486	prpf18	100	80.912	Monopterus_albus
ENSPNAG00000023151	prpf18	100	85.470	MGP_CAROLIEiJ_G0023143	Prpf18	100	95.890	Mus_caroli
ENSPNAG00000023151	prpf18	100	85.755	ENSMUSG00000039449	Prpf18	100	95.890	Mus_musculus
ENSPNAG00000023151	prpf18	100	85.755	MGP_PahariEiJ_G0019203	Prpf18	100	95.890	Mus_pahari
ENSPNAG00000023151	prpf18	100	85.470	MGP_SPRETEiJ_G0024061	Prpf18	100	95.890	Mus_spretus
ENSPNAG00000023151	prpf18	100	84.615	ENSMPUG00000000938	-	100	84.615	Mustela_putorius_furo
ENSPNAG00000023151	prpf18	100	85.185	ENSMLUG00000009200	-	100	85.185	Myotis_lucifugus
ENSPNAG00000023151	prpf18	66	83.621	ENSNGAG00000023550	-	83	83.621	Nannospalax_galili
ENSPNAG00000023151	prpf18	100	85.470	ENSNGAG00000012500	-	100	85.470	Nannospalax_galili
ENSPNAG00000023151	prpf18	100	87.464	ENSNBRG00000001778	prpf18	100	87.464	Neolamprologus_brichardi
ENSPNAG00000023151	prpf18	100	85.470	ENSNLEG00000012186	-	100	85.470	Nomascus_leucogenys
ENSPNAG00000023151	prpf18	74	74.517	ENSMEUG00000005032	-	75	74.517	Notamacropus_eugenii
ENSPNAG00000023151	prpf18	78	64.964	ENSOPRG00000002153	-	100	64.964	Ochotona_princeps
ENSPNAG00000023151	prpf18	100	84.615	ENSODEG00000003770	-	100	84.615	Octodon_degus
ENSPNAG00000023151	prpf18	98	86.919	ENSONIG00000014854	prpf18	96	86.919	Oreochromis_niloticus
ENSPNAG00000023151	prpf18	100	85.185	ENSOANG00000015404	-	100	85.185	Ornithorhynchus_anatinus
ENSPNAG00000023151	prpf18	100	85.185	ENSOCUG00000027756	-	96	86.012	Oryctolagus_cuniculus
ENSPNAG00000023151	prpf18	100	88.319	ENSORLG00000010293	prpf18	100	88.319	Oryzias_latipes
ENSPNAG00000023151	prpf18	100	88.319	ENSORLG00020001530	prpf18	100	88.319	Oryzias_latipes_hni
ENSPNAG00000023151	prpf18	100	88.034	ENSORLG00015013705	prpf18	100	88.034	Oryzias_latipes_hsok
ENSPNAG00000023151	prpf18	100	87.749	ENSOMEG00000009167	prpf18	100	87.749	Oryzias_melastigma
ENSPNAG00000023151	prpf18	100	84.900	ENSOGAG00000007294	-	100	84.900	Otolemur_garnettii
ENSPNAG00000023151	prpf18	100	84.615	ENSOARG00000006243	-	100	84.615	Ovis_aries
ENSPNAG00000023151	prpf18	100	85.470	ENSPPAG00000041959	-	100	85.470	Pan_paniscus
ENSPNAG00000023151	prpf18	100	84.900	ENSPPRG00000000107	-	100	84.900	Panthera_pardus
ENSPNAG00000023151	prpf18	100	84.900	ENSPTIG00000021094	-	100	84.900	Panthera_tigris_altaica
ENSPNAG00000023151	prpf18	100	85.470	ENSPTRG00000002306	PRPF18	100	85.470	Pan_troglodytes
ENSPNAG00000023151	prpf18	100	85.185	ENSPANG00000023346	-	100	85.185	Papio_anubis
ENSPNAG00000023151	prpf18	100	87.464	ENSPKIG00000014128	prpf18	96	87.464	Paramormyrops_kingsleyae
ENSPNAG00000023151	prpf18	100	84.615	ENSPSIG00000016064	-	100	84.615	Pelodiscus_sinensis
ENSPNAG00000023151	prpf18	100	80.912	ENSPMGG00000016486	prpf18	100	80.912	Periophthalmus_magnuspinnatus
ENSPNAG00000023151	prpf18	100	85.185	ENSPEMG00000013704	Prpf18	100	85.185	Peromyscus_maniculatus_bairdii
ENSPNAG00000023151	prpf18	100	73.504	ENSPMAG00000000204	prpf18	100	73.504	Petromyzon_marinus
ENSPNAG00000023151	prpf18	93	84.308	ENSPCIG00000012963	-	99	84.308	Phascolarctos_cinereus
ENSPNAG00000023151	prpf18	100	86.325	ENSPFOG00000017611	prpf18	100	86.325	Poecilia_formosa
ENSPNAG00000023151	prpf18	100	84.900	ENSPLAG00000000369	prpf18	100	84.900	Poecilia_latipinna
ENSPNAG00000023151	prpf18	100	86.610	ENSPMEG00000005183	prpf18	100	86.610	Poecilia_mexicana
ENSPNAG00000023151	prpf18	100	86.040	ENSPREG00000015232	prpf18	100	86.040	Poecilia_reticulata
ENSPNAG00000023151	prpf18	100	85.185	ENSPPYG00000002101	PRPF18	100	85.185	Pongo_abelii
ENSPNAG00000023151	prpf18	100	67.806	ENSPCAG00000010833	-	100	67.806	Procavia_capensis
ENSPNAG00000023151	prpf18	100	79.772	ENSPCOG00000013057	-	100	79.772	Propithecus_coquereli
ENSPNAG00000023151	prpf18	100	52.422	ENSPVAG00000002947	-	100	52.422	Pteropus_vampyrus
ENSPNAG00000023151	prpf18	100	89.174	ENSPNYG00000003554	prpf18	100	89.174	Pundamilia_nyererei
ENSPNAG00000023151	prpf18	100	85.185	ENSRNOG00000018396	Prpf18	100	85.185	Rattus_norvegicus
ENSPNAG00000023151	prpf18	100	85.470	ENSRBIG00000028028	-	100	85.470	Rhinopithecus_bieti
ENSPNAG00000023151	prpf18	100	85.755	ENSRROG00000040695	-	100	85.755	Rhinopithecus_roxellana
ENSPNAG00000023151	prpf18	100	85.470	ENSSBOG00000034482	-	100	85.470	Saimiri_boliviensis_boliviensis
ENSPNAG00000023151	prpf18	100	85.185	ENSSHAG00000016463	-	100	85.185	Sarcophilus_harrisii
ENSPNAG00000023151	prpf18	100	70.940	ENSSHAG00000009669	-	100	70.940	Sarcophilus_harrisii
ENSPNAG00000023151	prpf18	98	87.536	ENSSFOG00015022118	prpf18	100	79.775	Scleropages_formosus
ENSPNAG00000023151	prpf18	66	50.215	ENSSFOG00015021154	-	89	50.215	Scleropages_formosus
ENSPNAG00000023151	prpf18	100	86.325	ENSSMAG00000005308	prpf18	100	86.325	Scophthalmus_maximus
ENSPNAG00000023151	prpf18	100	90.028	ENSSDUG00000015428	prpf18	100	90.028	Seriola_dumerili
ENSPNAG00000023151	prpf18	100	90.028	ENSSLDG00000023989	prpf18	100	90.028	Seriola_lalandi_dorsalis
ENSPNAG00000023151	prpf18	100	57.835	ENSSARG00000005307	-	100	57.835	Sorex_araneus
ENSPNAG00000023151	prpf18	100	84.615	ENSSPUG00000002619	-	100	84.615	Sphenodon_punctatus
ENSPNAG00000023151	prpf18	100	88.604	ENSSPAG00000019502	prpf18	100	88.604	Stegastes_partitus
ENSPNAG00000023151	prpf18	100	84.900	ENSSSCG00000026354	-	100	84.900	Sus_scrofa
ENSPNAG00000023151	prpf18	100	84.615	ENSTGUG00000002286	-	100	84.615	Taeniopygia_guttata
ENSPNAG00000023151	prpf18	100	84.330	ENSTRUG00000011278	prpf18	100	84.330	Takifugu_rubripes
ENSPNAG00000023151	prpf18	100	85.755	ENSTNIG00000000911	prpf18	100	85.755	Tetraodon_nigroviridis
ENSPNAG00000023151	prpf18	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSPNAG00000023151	prpf18	100	85.470	ENSTTRG00000011117	PRPF18	100	85.470	Tursiops_truncatus
ENSPNAG00000023151	prpf18	91	87.500	ENSUAMG00000001815	-	93	87.500	Ursus_americanus
ENSPNAG00000023151	prpf18	100	80.057	ENSUMAG00000012329	-	100	80.057	Ursus_maritimus
ENSPNAG00000023151	prpf18	100	79.487	ENSVPAG00000011486	-	100	79.487	Vicugna_pacos
ENSPNAG00000023151	prpf18	100	84.900	ENSVVUG00000005453	-	100	84.900	Vulpes_vulpes
ENSPNAG00000023151	prpf18	100	77.493	ENSXETG00000024057	prpf18	100	77.493	Xenopus_tropicalis
ENSPNAG00000023151	prpf18	100	84.703	ENSXCOG00000020414	prpf18	100	84.703	Xiphophorus_couchianus
ENSPNAG00000023151	prpf18	100	86.610	ENSXMAG00000004713	prpf18	91	86.610	Xiphophorus_maculatus