EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000023179 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 5743 bases
Position: chrKV575341.1:2952132-2957874
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000034100	RRM_1	PF00076.22	9.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000025597	-	393	-	ENSPNAP00000034100	130 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000023179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000023179	-	58	45.570	ENSPNAG00000010438	srsf3b	64	43.396
ENSPNAG00000023179	-	58	45.570	ENSPNAG00000012262	srsf3a	80	42.453
ENSPNAG00000023179	-	92	57.143	ENSPNAG00000011262	srsf5b	81	60.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000023179	-	94	84.252	ENSG00000124193	SRSF6	59	95.000	Homo_sapiens
ENSPNAG00000023179	-	95	83.459	ENSAPOG00000016635	-	83	85.714	Acanthochromis_polyacanthus
ENSPNAG00000023179	-	94	86.179	ENSACIG00000020091	-	95	85.039	Amphilophus_citrinellus
ENSPNAG00000023179	-	60	94.872	ENSAOCG00000019438	-	98	71.074	Amphiprion_ocellaris
ENSPNAG00000023179	-	94	84.252	ENSANAG00000024080	SRSF6	59	95.000	Aotus_nancymaae
ENSPNAG00000023179	-	56	91.781	ENSACLG00000024373	-	89	89.412	Astatotilapia_calliptera
ENSPNAG00000023179	-	94	84.615	ENSAMXG00000042692	-	98	83.942	Astyanax_mexicanus
ENSPNAG00000023179	-	94	82.677	ENSBTAG00000008527	SRSF6	59	93.750	Bos_taurus
ENSPNAG00000023179	-	94	84.252	ENSCJAG00000048403	SRSF6	59	95.000	Callithrix_jacchus
ENSPNAG00000023179	-	94	82.677	ENSCAFG00000009289	SRSF6	59	93.750	Canis_familiaris
ENSPNAG00000023179	-	94	82.677	ENSCAFG00020013559	SRSF6	59	93.750	Canis_lupus_dingo
ENSPNAG00000023179	-	94	82.677	ENSCHIG00000015890	-	59	93.750	Capra_hircus
ENSPNAG00000023179	-	94	84.252	ENSCPOG00000011761	SRSF6	59	95.000	Cavia_porcellus
ENSPNAG00000023179	-	94	84.252	ENSCCAG00000026018	-	59	95.000	Cebus_capucinus
ENSPNAG00000023179	-	94	84.252	ENSCATG00000030794	SRSF6	59	95.000	Cercocebus_atys
ENSPNAG00000023179	-	94	84.252	ENSCLAG00000010247	SRSF6	59	95.000	Chinchilla_lanigera
ENSPNAG00000023179	-	94	82.677	ENSCGRG00001022339	Srsf6	60	91.358	Cricetulus_griseus_chok1gshd
ENSPNAG00000023179	-	95	85.484	ENSCSEG00000019778	SRSF6	92	87.200	Cynoglossus_semilaevis
ENSPNAG00000023179	-	99	85.385	ENSCVAG00000001863	SRSF6	100	86.923	Cyprinodon_variegatus
ENSPNAG00000023179	-	94	82.443	ENSDARG00000016783	srsf6b	89	91.765	Danio_rerio
ENSPNAG00000023179	-	94	84.252	ENSDORG00000028378	Srsf6	59	95.000	Dipodomys_ordii
ENSPNAG00000023179	-	94	84.375	ENSELUG00000013506	SRSF6	73	91.463	Esox_lucius
ENSPNAG00000023179	-	95	85.075	ENSELUG00000024182	SRSF6	90	85.366	Esox_lucius
ENSPNAG00000023179	-	94	83.206	ENSGALG00000000990	SRSF6	60	93.827	Gallus_gallus
ENSPNAG00000023179	-	91	80.159	ENSGAFG00000019088	-	72	83.200	Gambusia_affinis
ENSPNAG00000023179	-	94	84.252	ENSGGOG00000009808	SRSF6	59	95.000	Gorilla_gorilla
ENSPNAG00000023179	-	94	84.252	ENSHGLG00000007348	SRSF6	59	95.000	Heterocephalus_glaber_female
ENSPNAG00000023179	-	94	84.252	ENSSTOG00000010866	SRSF6	59	95.000	Ictidomys_tridecemlineatus
ENSPNAG00000023179	-	94	84.252	ENSMFAG00000036925	SRSF6	59	95.000	Macaca_fascicularis
ENSPNAG00000023179	-	94	84.252	ENSMMUG00000006742	SRSF6	59	95.000	Macaca_mulatta
ENSPNAG00000023179	-	94	84.252	ENSMNEG00000027392	-	59	95.000	Macaca_nemestrina
ENSPNAG00000023179	-	64	90.361	ENSMAMG00000023477	-	89	90.361	Mastacembelus_armatus
ENSPNAG00000023179	-	62	91.358	ENSMAUG00000019086	-	60	91.358	Mesocricetus_auratus
ENSPNAG00000023179	-	94	84.252	ENSMICG00000008537	SRSF6	59	95.000	Microcebus_murinus
ENSPNAG00000023179	-	60	93.590	ENSMMOG00000015241	-	79	91.667	Mola_mola
ENSPNAG00000023179	-	94	82.677	MGP_CAROLIEiJ_G0024606	Srsf6	60	91.358	Mus_caroli
ENSPNAG00000023179	-	94	82.677	ENSMUSG00000016921	Srsf6	60	91.358	Mus_musculus
ENSPNAG00000023179	-	94	82.677	MGP_PahariEiJ_G0026050	Srsf6	60	91.358	Mus_pahari
ENSPNAG00000023179	-	94	82.677	MGP_SPRETEiJ_G0025528	Srsf6	60	91.358	Mus_spretus
ENSPNAG00000023179	-	94	84.252	ENSNGAG00000017560	Srsf6	59	95.000	Nannospalax_galili
ENSPNAG00000023179	-	94	84.252	ENSNLEG00000006524	SRSF6	59	95.000	Nomascus_leucogenys
ENSPNAG00000023179	-	62	95.000	ENSODEG00000016510	-	59	95.000	Octodon_degus
ENSPNAG00000023179	-	92	86.667	ENSORLG00020017506	srsf6a	74	87.705	Oryzias_latipes_hni
ENSPNAG00000023179	-	94	84.252	ENSPTRG00000044686	-	59	95.000	Pan_troglodytes
ENSPNAG00000023179	-	94	84.252	ENSPANG00000035224	SRSF6	59	95.000	Papio_anubis
ENSPNAG00000023179	-	97	89.764	ENSPKIG00000015603	-	91	91.339	Paramormyrops_kingsleyae
ENSPNAG00000023179	-	94	90.984	ENSPKIG00000018463	-	81	95.122	Paramormyrops_kingsleyae
ENSPNAG00000023179	-	92	74.167	ENSPKIG00000015703	-	83	72.072	Paramormyrops_kingsleyae
ENSPNAG00000023179	-	94	82.812	ENSPCIG00000003820	SRSF6	59	95.000	Phascolarctos_cinereus
ENSPNAG00000023179	-	94	82.308	ENSPLAG00000009243	srsf6a	80	83.465	Poecilia_latipinna
ENSPNAG00000023179	-	95	82.576	ENSPREG00000001040	srsf6a	89	84.848	Poecilia_reticulata
ENSPNAG00000023179	-	94	84.252	ENSPCOG00000026364	SRSF6	59	95.000	Propithecus_coquereli
ENSPNAG00000023179	-	94	90.164	ENSRBIG00000041414	SRSF6	62	95.000	Rhinopithecus_bieti
ENSPNAG00000023179	-	94	84.252	ENSRROG00000029989	SRSF6	59	95.000	Rhinopithecus_roxellana
ENSPNAG00000023179	-	94	84.252	ENSSBOG00000033708	-	59	95.000	Saimiri_boliviensis_boliviensis
ENSPNAG00000023179	-	62	93.750	ENSSMAG00000014861	-	96	66.154	Scophthalmus_maximus
ENSPNAG00000023179	-	64	90.361	ENSSDUG00000011036	-	90	90.361	Seriola_dumerili
ENSPNAG00000023179	-	64	90.361	ENSSLDG00000014858	-	90	90.361	Seriola_lalandi_dorsalis
ENSPNAG00000023179	-	94	86.400	ENSSPUG00000004967	SRSF6	60	93.827	Sphenodon_punctatus
ENSPNAG00000023179	-	64	89.157	ENSSPAG00000021913	-	86	89.157	Stegastes_partitus
ENSPNAG00000023179	-	62	93.750	ENSTRUG00000021397	-	87	93.750	Takifugu_rubripes
ENSPNAG00000023179	-	94	82.677	ENSUAMG00000003559	SRSF6	59	93.750	Ursus_americanus
ENSPNAG00000023179	-	62	61.250	ENSVVUG00000019276	-	57	61.250	Vulpes_vulpes