EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPNAG00000023268 (Gene tree)
Gene ID: 108438374
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 260-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 10102 bases
Position: chrKV575554.1:357644-367745
Accession: 108438374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000017068	zf-C2H2	PF00096.26	3e-28	1	6
ENSPNAP00000017068	zf-C2H2	PF00096.26	3e-28	2	6
ENSPNAP00000017068	zf-C2H2	PF00096.26	3e-28	3	6
ENSPNAP00000017068	zf-C2H2	PF00096.26	3e-28	4	6
ENSPNAP00000017068	zf-C2H2	PF00096.26	3e-28	5	6
ENSPNAP00000017068	zf-C2H2	PF00096.26	3e-28	6	6
ENSPNAP00000017063	zf-C2H2	PF00096.26	4.4e-28	1	6
ENSPNAP00000017063	zf-C2H2	PF00096.26	4.4e-28	2	6
ENSPNAP00000017063	zf-C2H2	PF00096.26	4.4e-28	3	6
ENSPNAP00000017063	zf-C2H2	PF00096.26	4.4e-28	4	6
ENSPNAP00000017063	zf-C2H2	PF00096.26	4.4e-28	5	6
ENSPNAP00000017063	zf-C2H2	PF00096.26	4.4e-28	6	6
ENSPNAP00000017068	zf-met	PF12874.7	2.1e-08	1	3
ENSPNAP00000017068	zf-met	PF12874.7	2.1e-08	2	3
ENSPNAP00000017068	zf-met	PF12874.7	2.1e-08	3	3
ENSPNAP00000017063	zf-met	PF12874.7	3e-08	1	3
ENSPNAP00000017063	zf-met	PF12874.7	3e-08	2	3
ENSPNAP00000017063	zf-met	PF12874.7	3e-08	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000025730	-	5947	XM_017716150	ENSPNAP00000017063	633 (aa)	XP_017571639	UPI000814AEEC
ENSPNAT00000038381	-	6007	XM_017716153	ENSPNAP00000017068	609 (aa)	XP_017571642	UPI0008144217

Gene Model

Click here to download ENSPNAG00000023268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000023268	-	50	33.636	ENSPNAG00000007265	-	88	34.956
ENSPNAG00000023268	-	50	36.797	ENSPNAG00000028765	-	83	37.118
ENSPNAG00000023268	-	70	38.000	ENSPNAG00000003919	-	96	38.000
ENSPNAG00000023268	-	50	34.091	ENSPNAG00000004318	zbtb47a	75	34.091
ENSPNAG00000023268	-	60	34.156	ENSPNAG00000016034	zbtb41	58	34.156