EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000023390 (Gene tree)
Gene ID: 108439988
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 19463 bases
Position: chrKV575623.1:379818-399280
Accession: 108439988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000034258	efThoc1	PF11957.8	4.8e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000025877	-	1987	XM_017718671	ENSPNAP00000034258	652 (aa)	XP_017574160	UPI0008147A98

Gene Model

Click here to download ENSPNAG00000023390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000023390	thoc1	99	74.615	ENSG00000079134	THOC1	99	83.158	Homo_sapiens
ENSPNAG00000023390	thoc1	99	74.615	ENSAMEG00000006645	THOC1	98	74.615	Ailuropoda_melanoleuca
ENSPNAG00000023390	thoc1	94	84.176	ENSACIG00000019392	thoc1	95	84.502	Amphilophus_citrinellus
ENSPNAG00000023390	thoc1	100	79.786	ENSAOCG00000008391	thoc1	100	80.092	Amphiprion_ocellaris
ENSPNAG00000023390	thoc1	100	84.098	ENSAPEG00000001093	thoc1	100	84.404	Amphiprion_percula
ENSPNAG00000023390	thoc1	99	83.308	ENSATEG00000004783	thoc1	99	83.614	Anabas_testudineus
ENSPNAG00000023390	thoc1	99	73.354	ENSAPLG00000016149	THOC1	98	73.507	Anas_platyrhynchos
ENSPNAG00000023390	thoc1	99	74.923	ENSACAG00000008307	THOC1	96	74.923	Anolis_carolinensis
ENSPNAG00000023390	thoc1	99	73.973	ENSANAG00000033200	THOC1	98	73.973	Aotus_nancymaae
ENSPNAG00000023390	thoc1	100	83.333	ENSACLG00000016836	thoc1	100	83.639	Astatotilapia_calliptera
ENSPNAG00000023390	thoc1	94	84.591	ENSAMXG00000014708	thoc1	97	84.591	Astyanax_mexicanus
ENSPNAG00000023390	thoc1	99	74.769	ENSBTAG00000019215	THOC1	98	74.769	Bos_taurus
ENSPNAG00000023390	thoc1	65	36.659	WBGene00020172	thoc-1	68	36.245	Caenorhabditis_elegans
ENSPNAG00000023390	thoc1	99	74.769	ENSCJAG00000020450	THOC1	98	74.769	Callithrix_jacchus
ENSPNAG00000023390	thoc1	99	74.462	ENSCAFG00000018324	THOC1	98	74.462	Canis_familiaris
ENSPNAG00000023390	thoc1	99	74.462	ENSCAFG00020017894	THOC1	98	74.462	Canis_lupus_dingo
ENSPNAG00000023390	thoc1	99	74.769	ENSCHIG00000015399	THOC1	99	74.768	Capra_hircus
ENSPNAG00000023390	thoc1	99	74.615	ENSTSYG00000010585	THOC1	98	74.615	Carlito_syrichta
ENSPNAG00000023390	thoc1	97	55.538	ENSCAPG00000016270	THOC1	97	55.538	Cavia_aperea
ENSPNAG00000023390	thoc1	99	73.538	ENSCPOG00000000959	THOC1	98	73.538	Cavia_porcellus
ENSPNAG00000023390	thoc1	99	74.769	ENSCCAG00000025766	THOC1	98	74.769	Cebus_capucinus
ENSPNAG00000023390	thoc1	99	72.615	ENSCATG00000028180	THOC1	96	78.841	Cercocebus_atys
ENSPNAG00000023390	thoc1	97	74.763	ENSCLAG00000009117	THOC1	99	74.763	Chinchilla_lanigera
ENSPNAG00000023390	thoc1	99	74.769	ENSCSAG00000017631	THOC1	98	74.769	Chlorocebus_sabaeus
ENSPNAG00000023390	thoc1	79	77.459	ENSCHOG00000010609	THOC1	78	77.459	Choloepus_hoffmanni
ENSPNAG00000023390	thoc1	99	74.847	ENSCPBG00000027558	THOC1	99	75.000	Chrysemys_picta_bellii
ENSPNAG00000023390	thoc1	69	50.108	ENSCING00000007663	-	92	50.108	Ciona_intestinalis
ENSPNAG00000023390	thoc1	94	47.950	ENSCSAVG00000010649	-	99	47.950	Ciona_savignyi
ENSPNAG00000023390	thoc1	99	74.615	ENSCANG00000034265	THOC1	96	79.472	Colobus_angolensis_palliatus
ENSPNAG00000023390	thoc1	99	74.308	ENSCGRG00001016464	Thoc1	98	74.308	Cricetulus_griseus_chok1gshd
ENSPNAG00000023390	thoc1	98	74.765	ENSCGRG00000010269	-	99	75.079	Cricetulus_griseus_crigri
ENSPNAG00000023390	thoc1	90	61.158	ENSCGRG00000003390	-	97	61.158	Cricetulus_griseus_crigri
ENSPNAG00000023390	thoc1	99	81.155	ENSCSEG00000012486	thoc1	99	83.119	Cynoglossus_semilaevis
ENSPNAG00000023390	thoc1	100	81.804	ENSCVAG00000020600	thoc1	100	82.110	Cyprinodon_variegatus
ENSPNAG00000023390	thoc1	99	87.730	ENSDARG00000088246	thoc1	99	87.730	Danio_rerio
ENSPNAG00000023390	thoc1	99	74.462	ENSDNOG00000019217	THOC1	98	74.462	Dasypus_novemcinctus
ENSPNAG00000023390	thoc1	99	69.525	ENSDORG00000008060	Thoc1	98	70.978	Dipodomys_ordii
ENSPNAG00000023390	thoc1	79	41.805	FBgn0037382	Hpr1	73	41.805	Drosophila_melanogaster
ENSPNAG00000023390	thoc1	90	58.362	ENSETEG00000004165	THOC1	98	58.362	Echinops_telfairi
ENSPNAG00000023390	thoc1	92	64.214	ENSEBUG00000005998	thoc1	97	65.385	Eptatretus_burgeri
ENSPNAG00000023390	thoc1	99	74.308	ENSEASG00005002549	THOC1	94	74.308	Equus_asinus_asinus
ENSPNAG00000023390	thoc1	99	74.615	ENSECAG00000009267	THOC1	88	74.615	Equus_caballus
ENSPNAG00000023390	thoc1	79	60.284	ENSEEUG00000012214	-	81	60.284	Erinaceus_europaeus
ENSPNAG00000023390	thoc1	100	84.475	ENSELUG00000023277	thoc1	100	84.475	Esox_lucius
ENSPNAG00000023390	thoc1	99	74.615	ENSFCAG00000022454	THOC1	85	74.615	Felis_catus
ENSPNAG00000023390	thoc1	97	74.531	ENSFALG00000006205	THOC1	99	74.688	Ficedula_albicollis
ENSPNAG00000023390	thoc1	98	74.455	ENSFDAG00000006842	THOC1	99	74.455	Fukomys_damarensis
ENSPNAG00000023390	thoc1	100	82.722	ENSFHEG00000008841	thoc1	100	83.028	Fundulus_heteroclitus
ENSPNAG00000023390	thoc1	99	80.982	ENSGMOG00000011486	thoc1	99	81.288	Gadus_morhua
ENSPNAG00000023390	thoc1	99	74.233	ENSGALG00000014915	THOC1	99	73.636	Gallus_gallus
ENSPNAG00000023390	thoc1	99	81.776	ENSGAFG00000021464	thoc1	99	82.989	Gambusia_affinis
ENSPNAG00000023390	thoc1	100	82.110	ENSGACG00000017361	thoc1	100	82.569	Gasterosteus_aculeatus
ENSPNAG00000023390	thoc1	99	75.000	ENSGAGG00000021230	-	97	75.153	Gopherus_agassizii
ENSPNAG00000023390	thoc1	99	74.769	ENSGGOG00000003013	THOC1	98	74.769	Gorilla_gorilla
ENSPNAG00000023390	thoc1	100	83.639	ENSHBUG00000009096	thoc1	100	83.945	Haplochromis_burtoni
ENSPNAG00000023390	thoc1	70	68.020	ENSHGLG00000009264	-	98	71.351	Heterocephalus_glaber_female
ENSPNAG00000023390	thoc1	99	74.000	ENSHGLG00000003712	-	98	74.000	Heterocephalus_glaber_female
ENSPNAG00000023390	thoc1	77	60.106	ENSHGLG00100002225	-	98	60.106	Heterocephalus_glaber_male
ENSPNAG00000023390	thoc1	99	74.000	ENSHGLG00100003570	THOC1	98	74.000	Heterocephalus_glaber_male
ENSPNAG00000023390	thoc1	99	76.087	ENSIPUG00000005306	thoc1	100	76.087	Ictalurus_punctatus
ENSPNAG00000023390	thoc1	99	74.154	ENSSTOG00000006484	THOC1	98	74.154	Ictidomys_tridecemlineatus
ENSPNAG00000023390	thoc1	52	74.636	ENSJJAG00000014893	-	96	74.636	Jaculus_jaculus
ENSPNAG00000023390	thoc1	100	82.110	ENSKMAG00000003904	thoc1	100	82.416	Kryptolebias_marmoratus
ENSPNAG00000023390	thoc1	99	82.389	ENSLBEG00000020372	thoc1	98	82.695	Labrus_bergylta
ENSPNAG00000023390	thoc1	99	73.886	ENSLACG00000014869	THOC1	99	73.886	Latimeria_chalumnae
ENSPNAG00000023390	thoc1	100	81.707	ENSLOCG00000002097	thoc1	99	81.707	Lepisosteus_oculatus
ENSPNAG00000023390	thoc1	99	74.615	ENSLAFG00000009585	THOC1	98	74.615	Loxodonta_africana
ENSPNAG00000023390	thoc1	99	74.769	ENSMFAG00000041520	THOC1	98	74.769	Macaca_fascicularis
ENSPNAG00000023390	thoc1	99	74.769	ENSMMUG00000004662	THOC1	98	74.769	Macaca_mulatta
ENSPNAG00000023390	thoc1	99	74.769	ENSMNEG00000040177	THOC1	98	74.769	Macaca_nemestrina
ENSPNAG00000023390	thoc1	99	74.769	ENSMLEG00000034201	THOC1	98	74.769	Mandrillus_leucophaeus
ENSPNAG00000023390	thoc1	96	83.227	ENSMAMG00000016747	thoc1	100	83.546	Mastacembelus_armatus
ENSPNAG00000023390	thoc1	100	83.333	ENSMZEG00005024609	thoc1	100	83.639	Maylandia_zebra
ENSPNAG00000023390	thoc1	97	74.295	ENSMGAG00000009811	THOC1	99	74.451	Meleagris_gallopavo
ENSPNAG00000023390	thoc1	99	74.154	ENSMAUG00000010272	Thoc1	98	74.154	Mesocricetus_auratus
ENSPNAG00000023390	thoc1	99	74.923	ENSMICG00000027200	THOC1	98	74.923	Microcebus_murinus
ENSPNAG00000023390	thoc1	99	73.077	ENSMOCG00000014536	-	85	73.077	Microtus_ochrogaster
ENSPNAG00000023390	thoc1	99	64.308	ENSMOCG00000014924	-	95	64.308	Microtus_ochrogaster
ENSPNAG00000023390	thoc1	93	82.651	ENSMMOG00000011772	thoc1	100	83.987	Mola_mola
ENSPNAG00000023390	thoc1	99	73.708	ENSMODG00000021482	THOC1	98	73.860	Monodelphis_domestica
ENSPNAG00000023390	thoc1	99	83.920	ENSMALG00000021872	thoc1	99	84.227	Monopterus_albus
ENSPNAG00000023390	thoc1	99	73.538	MGP_CAROLIEiJ_G0021989	Thoc1	98	73.538	Mus_caroli
ENSPNAG00000023390	thoc1	99	73.538	ENSMUSG00000024287	Thoc1	98	73.538	Mus_musculus
ENSPNAG00000023390	thoc1	99	73.538	MGP_PahariEiJ_G0018726	Thoc1	98	73.538	Mus_pahari
ENSPNAG00000023390	thoc1	99	73.538	MGP_SPRETEiJ_G0022905	Thoc1	98	73.538	Mus_spretus
ENSPNAG00000023390	thoc1	99	74.615	ENSMPUG00000005448	THOC1	98	74.615	Mustela_putorius_furo
ENSPNAG00000023390	thoc1	90	68.855	ENSMLUG00000027965	-	99	68.855	Myotis_lucifugus
ENSPNAG00000023390	thoc1	99	73.886	ENSMLUG00000004090	-	98	73.886	Myotis_lucifugus
ENSPNAG00000023390	thoc1	61	67.085	ENSMLUG00000024912	-	100	67.085	Myotis_lucifugus
ENSPNAG00000023390	thoc1	97	59.370	ENSNGAG00000008061	-	97	59.370	Nannospalax_galili
ENSPNAG00000023390	thoc1	99	74.154	ENSNGAG00000001401	-	98	74.154	Nannospalax_galili
ENSPNAG00000023390	thoc1	98	83.046	ENSNBRG00000005991	thoc1	97	83.359	Neolamprologus_brichardi
ENSPNAG00000023390	thoc1	99	74.769	ENSNLEG00000006835	THOC1	98	74.769	Nomascus_leucogenys
ENSPNAG00000023390	thoc1	80	78.139	ENSMEUG00000009756	THOC1	90	78.139	Notamacropus_eugenii
ENSPNAG00000023390	thoc1	99	60.462	ENSOPRG00000001108	THOC1	98	60.462	Ochotona_princeps
ENSPNAG00000023390	thoc1	99	68.769	ENSODEG00000006623	THOC1	98	68.769	Octodon_degus
ENSPNAG00000023390	thoc1	100	83.639	ENSONIG00000009440	thoc1	99	83.792	Oreochromis_niloticus
ENSPNAG00000023390	thoc1	99	74.615	ENSOCUG00000011601	THOC1	98	74.615	Oryctolagus_cuniculus
ENSPNAG00000023390	thoc1	99	83.308	ENSORLG00000017629	thoc1	100	83.486	Oryzias_latipes
ENSPNAG00000023390	thoc1	99	83.155	ENSORLG00020007567	thoc1	100	83.333	Oryzias_latipes_hni
ENSPNAG00000023390	thoc1	99	83.308	ENSORLG00015007356	thoc1	100	83.486	Oryzias_latipes_hsok
ENSPNAG00000023390	thoc1	99	82.389	ENSOMEG00000008200	thoc1	100	83.180	Oryzias_melastigma
ENSPNAG00000023390	thoc1	99	71.692	ENSOGAG00000000470	THOC1	98	71.692	Otolemur_garnettii
ENSPNAG00000023390	thoc1	98	75.353	ENSOARG00000009238	THOC1	96	75.353	Ovis_aries
ENSPNAG00000023390	thoc1	99	74.769	ENSPPAG00000031812	THOC1	98	74.769	Pan_paniscus
ENSPNAG00000023390	thoc1	99	74.000	ENSPPRG00000023794	THOC1	96	78.551	Panthera_pardus
ENSPNAG00000023390	thoc1	99	74.000	ENSPTIG00000007469	THOC1	96	78.551	Panthera_tigris_altaica
ENSPNAG00000023390	thoc1	99	73.820	ENSPTRG00000009816	THOC1	98	73.820	Pan_troglodytes
ENSPNAG00000023390	thoc1	99	73.853	ENSPANG00000008665	THOC1	98	73.853	Papio_anubis
ENSPNAG00000023390	thoc1	100	83.511	ENSPKIG00000005906	thoc1	100	84.580	Paramormyrops_kingsleyae
ENSPNAG00000023390	thoc1	81	78.598	ENSPSIG00000007691	THOC1	97	78.788	Pelodiscus_sinensis
ENSPNAG00000023390	thoc1	95	79.393	ENSPMGG00000008279	thoc1	96	79.712	Periophthalmus_magnuspinnatus
ENSPNAG00000023390	thoc1	99	73.846	ENSPEMG00000021789	Thoc1	98	73.846	Peromyscus_maniculatus_bairdii
ENSPNAG00000023390	thoc1	74	74.694	ENSPCIG00000026942	THOC1	97	74.898	Phascolarctos_cinereus
ENSPNAG00000023390	thoc1	99	81.776	ENSPFOG00000011673	thoc1	99	82.083	Poecilia_formosa
ENSPNAG00000023390	thoc1	99	82.083	ENSPLAG00000019648	thoc1	99	82.389	Poecilia_latipinna
ENSPNAG00000023390	thoc1	99	81.930	ENSPMEG00000007083	thoc1	99	82.236	Poecilia_mexicana
ENSPNAG00000023390	thoc1	99	81.623	ENSPREG00000006719	thoc1	100	81.804	Poecilia_reticulata
ENSPNAG00000023390	thoc1	74	78.144	ENSPPYG00000009049	-	98	78.144	Pongo_abelii
ENSPNAG00000023390	thoc1	91	75.311	ENSPCAG00000005320	THOC1	91	75.311	Procavia_capensis
ENSPNAG00000023390	thoc1	99	74.154	ENSPCOG00000009234	THOC1	98	74.154	Propithecus_coquereli
ENSPNAG00000023390	thoc1	99	72.923	ENSPVAG00000004007	THOC1	98	72.923	Pteropus_vampyrus
ENSPNAG00000023390	thoc1	100	83.639	ENSPNYG00000019152	thoc1	100	83.945	Pundamilia_nyererei
ENSPNAG00000023390	thoc1	81	60.956	ENSRNOG00000015332	Thoc1	95	60.956	Rattus_norvegicus
ENSPNAG00000023390	thoc1	99	74.000	ENSRBIG00000033738	THOC1	99	77.043	Rhinopithecus_bieti
ENSPNAG00000023390	thoc1	99	74.769	ENSRROG00000044988	THOC1	96	79.472	Rhinopithecus_roxellana
ENSPNAG00000023390	thoc1	99	74.462	ENSSBOG00000016556	THOC1	98	74.462	Saimiri_boliviensis_boliviensis
ENSPNAG00000023390	thoc1	99	74.808	ENSSHAG00000014829	THOC1	98	74.962	Sarcophilus_harrisii
ENSPNAG00000023390	thoc1	100	85.321	ENSSFOG00015021527	thoc1	100	85.321	Scleropages_formosus
ENSPNAG00000023390	thoc1	100	80.518	ENSSMAG00000018465	thoc1	99	80.822	Scophthalmus_maximus
ENSPNAG00000023390	thoc1	99	84.227	ENSSDUG00000016810	thoc1	99	84.533	Seriola_dumerili
ENSPNAG00000023390	thoc1	99	83.920	ENSSLDG00000015555	thoc1	99	84.227	Seriola_lalandi_dorsalis
ENSPNAG00000023390	thoc1	87	73.256	ENSSARG00000006910	THOC1	86	73.256	Sorex_araneus
ENSPNAG00000023390	thoc1	98	74.299	ENSSPUG00000007238	THOC1	98	74.114	Sphenodon_punctatus
ENSPNAG00000023390	thoc1	99	80.611	ENSSPAG00000018847	thoc1	99	80.916	Stegastes_partitus
ENSPNAG00000023390	thoc1	99	74.615	ENSSSCG00000025653	THOC1	93	74.615	Sus_scrofa
ENSPNAG00000023390	thoc1	99	74.540	ENSTGUG00000010204	THOC1	99	74.693	Taeniopygia_guttata
ENSPNAG00000023390	thoc1	99	81.930	ENSTRUG00000013518	thoc1	99	82.236	Takifugu_rubripes
ENSPNAG00000023390	thoc1	99	81.623	ENSTNIG00000008473	thoc1	99	81.930	Tetraodon_nigroviridis
ENSPNAG00000023390	thoc1	99	67.385	ENSTBEG00000016920	THOC1	98	67.385	Tupaia_belangeri
ENSPNAG00000023390	thoc1	99	68.308	ENSTTRG00000016664	THOC1	98	68.308	Tursiops_truncatus
ENSPNAG00000023390	thoc1	99	74.615	ENSUAMG00000002527	THOC1	98	75.039	Ursus_americanus
ENSPNAG00000023390	thoc1	99	74.615	ENSUMAG00000019693	THOC1	98	74.615	Ursus_maritimus
ENSPNAG00000023390	thoc1	67	67.692	ENSVPAG00000003726	-	66	67.692	Vicugna_pacos
ENSPNAG00000023390	thoc1	99	74.462	ENSVVUG00000004384	THOC1	98	74.462	Vulpes_vulpes
ENSPNAG00000023390	thoc1	99	71.385	ENSXETG00000003155	thoc1	97	71.385	Xenopus_tropicalis
ENSPNAG00000023390	thoc1	98	75.232	ENSXCOG00000016085	thoc1	94	75.425	Xiphophorus_couchianus
ENSPNAG00000023390	thoc1	99	81.470	ENSXMAG00000002353	thoc1	100	81.651	Xiphophorus_maculatus