EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000023526 (Gene tree)
Gene ID
108426598
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Minus strand
Length
16372 bases
Position
chrKV575329.1:2550031-2566402
Accession
108426598
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000017292RRM_1PF00076.221.8e-1711
ENSPNAP00000034316RRM_1PF00076.222.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000026008-1809XM_017696218ENSPNAP00000034316285 (aa)XP_017551707UPI00081434AE
ENSPNAT00000025998-1347XM_017696219ENSPNAP00000017292232 (aa)XP_017551708UPI0008147F83
Gene Model
Click here to download ENSPNAG00000023526's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023526's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000023526pabpn18863.285ENSPNAG00000021666pabpn1l8470.760
ENSPNAG00000023526pabpn15330.723ENSPNAG00000001813eif4h5932.824
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000023526pabpn18683.981ENSG00000100836PABPN19483.929Homo_sapiens
ENSPNAG00000023526pabpn19973.820ENSG00000258643BCL2L2-PABPN17073.820Homo_sapiens
ENSPNAG00000023526pabpn110097.845ENSAPOG00000016425pabpn110097.845Acanthochromis_polyacanthus
ENSPNAG00000023526pabpn18185.789ENSAMEG00000007048BCL2L2-PABPN110085.789Ailuropoda_melanoleuca
ENSPNAG00000023526pabpn19995.105ENSACIG00000021744pabpn110097.727Amphilophus_citrinellus
ENSPNAG00000023526pabpn110097.845ENSAOCG00000015805pabpn110097.845Amphiprion_ocellaris
ENSPNAG00000023526pabpn110097.845ENSAPEG00000009623pabpn110097.845Amphiprion_percula
ENSPNAG00000023526pabpn110098.276ENSATEG00000020531pabpn110098.276Anabas_testudineus
ENSPNAG00000023526pabpn18185.263ENSACAG00000006185-8172.500Anolis_carolinensis
ENSPNAG00000023526pabpn18485.354ENSANAG00000024513-8477.273Aotus_nancymaae
ENSPNAG00000023526pabpn19994.774ENSACLG00000016374pabpn110094.774Astatotilapia_calliptera
ENSPNAG00000023526pabpn110099.142ENSAMXG00000000452pabpn110099.435Astyanax_mexicanus
ENSPNAG00000023526pabpn18184.375ENSBTAG00000053753-7184.375Bos_taurus
ENSPNAG00000023526pabpn18485.354ENSBTAG00000006884PABPN18670.833Bos_taurus
ENSPNAG00000023526pabpn18478.061ENSBTAG00000050594-7484.409Bos_taurus
ENSPNAG00000023526pabpn16259.589WBGene00003904pabp-28655.249Caenorhabditis_elegans
ENSPNAG00000023526pabpn19977.253ENSCJAG00000007960-8477.682Callithrix_jacchus
ENSPNAG00000023526pabpn17182.143ENSCJAG00000004407-8482.143Callithrix_jacchus
ENSPNAG00000023526pabpn18683.981ENSCAFG00000011482PABPN18672.348Canis_familiaris
ENSPNAG00000023526pabpn18683.981ENSCAFG00020006651-8671.970Canis_lupus_dingo
ENSPNAG00000023526pabpn18683.981ENSCAFG00020007298-8671.970Canis_lupus_dingo
ENSPNAG00000023526pabpn18683.981ENSCHIG00000012184PABPN18671.970Capra_hircus
ENSPNAG00000023526pabpn19973.820ENSTSYG00000033996BCL2L2-PABPN19483.929Carlito_syrichta
ENSPNAG00000023526pabpn15983.453ENSCAPG00000009461-9983.453Cavia_aperea
ENSPNAG00000023526pabpn18683.495ENSCPOG00000025574PABPN16883.254Cavia_porcellus
ENSPNAG00000023526pabpn19977.253ENSCCAG00000033954BCL2L2-PABPN18477.682Cebus_capucinus
ENSPNAG00000023526pabpn19977.253ENSCATG00000038536BCL2L2-PABPN18477.682Cercocebus_atys
ENSPNAG00000023526pabpn16583.444ENSCLAG00000012423PABPN15683.444Chinchilla_lanigera
ENSPNAG00000023526pabpn18682.524ENSCSAG00000016036PABPN18670.833Chlorocebus_sabaeus
ENSPNAG00000023526pabpn18974.286ENSCHOG00000004798BCL2L2-PABPN19272.273Choloepus_hoffmanni
ENSPNAG00000023526pabpn17184.524ENSCPBG00000026060-9484.524Chrysemys_picta_bellii
ENSPNAG00000023526pabpn19064.455ENSCING00000012468-8961.137Ciona_intestinalis
ENSPNAG00000023526pabpn17666.292ENSCSAVG00000002001-9361.078Ciona_savignyi
ENSPNAG00000023526pabpn18572.222ENSCANG00000030980-8764.706Colobus_angolensis_palliatus
ENSPNAG00000023526pabpn19973.820ENSCANG00000009750BCL2L2-PABPN19483.929Colobus_angolensis_palliatus
ENSPNAG00000023526pabpn18683.495ENSCGRG00001019696Pabpn19483.333Cricetulus_griseus_chok1gshd
ENSPNAG00000023526pabpn16392.517ENSCGRG00000011102Pabpn19192.517Cricetulus_griseus_crigri
ENSPNAG00000023526pabpn110097.414ENSCSEG00000008774pabpn110097.414Cynoglossus_semilaevis
ENSPNAG00000023526pabpn110092.735ENSCVAG00000003152pabpn110094.017Cyprinodon_variegatus
ENSPNAG00000023526pabpn110098.276ENSDARG00000045373pabpn110099.078Danio_rerio
ENSPNAG00000023526pabpn18154.011ENSDARG00000087996pabpn1l9153.333Danio_rerio
ENSPNAG00000023526pabpn18683.981ENSDNOG00000023682PABPN18671.970Dasypus_novemcinctus
ENSPNAG00000023526pabpn15684.211ENSDORG00000023928-8583.607Dipodomys_ordii
ENSPNAG00000023526pabpn18683.010ENSDORG00000028966-8670.833Dipodomys_ordii
ENSPNAG00000023526pabpn110057.983FBgn0005648Pabp29758.333Drosophila_melanogaster
ENSPNAG00000023526pabpn19973.276ENSEBUG00000002322pabpn19973.276Eptatretus_burgeri
ENSPNAG00000023526pabpn18683.981ENSEASG00005011716PABPN18671.970Equus_asinus_asinus
ENSPNAG00000023526pabpn18583.333ENSECAG00000011652PABPN18571.542Equus_caballus
ENSPNAG00000023526pabpn18681.553ENSEEUG00000012973-6979.803Erinaceus_europaeus
ENSPNAG00000023526pabpn110095.781ENSELUG00000022654pabpn110095.781Esox_lucius
ENSPNAG00000023526pabpn18683.981ENSFCAG00000031922PABPN18671.970Felis_catus
ENSPNAG00000023526pabpn17183.333ENSFDAG00000018381BCL2L2-PABPN19483.333Fukomys_damarensis
ENSPNAG00000023526pabpn110094.828ENSFHEG00000007215pabpn110094.828Fundulus_heteroclitus
ENSPNAG00000023526pabpn19597.285ENSGMOG00000003922pabpn110094.386Gadus_morhua
ENSPNAG00000023526pabpn18382.828ENSGALG00000052930-6182.938Gallus_gallus
ENSPNAG00000023526pabpn110097.009ENSGAFG00000017099pabpn110097.009Gambusia_affinis
ENSPNAG00000023526pabpn19995.070ENSGACG00000002167pabpn110095.070Gasterosteus_aculeatus
ENSPNAG00000023526pabpn19977.253ENSGGOG00000022683-8477.682Gorilla_gorilla
ENSPNAG00000023526pabpn18970.673ENSGGOG00000039675-9166.667Gorilla_gorilla
ENSPNAG00000023526pabpn19467.521ENSGGOG00000025919-9870.470Gorilla_gorilla
ENSPNAG00000023526pabpn110098.276ENSHBUG00000019523pabpn110098.276Haplochromis_burtoni
ENSPNAG00000023526pabpn17164.671ENSHGLG00000009842-9364.671Heterocephalus_glaber_female
ENSPNAG00000023526pabpn18683.495ENSHGLG00000002927-9292.517Heterocephalus_glaber_female
ENSPNAG00000023526pabpn18771.014ENSHGLG00000018588-7075.532Heterocephalus_glaber_female
ENSPNAG00000023526pabpn17171.257ENSHGLG00100018935-9474.419Heterocephalus_glaber_male
ENSPNAG00000023526pabpn18771.014ENSHGLG00100015565-8766.376Heterocephalus_glaber_male
ENSPNAG00000023526pabpn19472.851ENSHGLG00100006673-9292.517Heterocephalus_glaber_male
ENSPNAG00000023526pabpn110097.414ENSHCOG00000004655pabpn110097.414Hippocampus_comes
ENSPNAG00000023526pabpn110098.707ENSIPUG00000008085PABPN110098.707Ictalurus_punctatus
ENSPNAG00000023526pabpn110090.948ENSIPUG00000000180-9990.948Ictalurus_punctatus
ENSPNAG00000023526pabpn17183.929ENSSTOG00000029847BCL2L2-PABPN19483.929Ictidomys_tridecemlineatus
ENSPNAG00000023526pabpn17183.929ENSJJAG00000023507Gm205219483.929Jaculus_jaculus
ENSPNAG00000023526pabpn110096.567ENSKMAG00000018748pabpn110096.567Kryptolebias_marmoratus
ENSPNAG00000023526pabpn110098.276ENSLBEG00000027266pabpn110098.276Labrus_bergylta
ENSPNAG00000023526pabpn17588.764ENSLACG00000000646pabpn18585.052Latimeria_chalumnae
ENSPNAG00000023526pabpn110093.357ENSLOCG00000000796pabpn110093.706Lepisosteus_oculatus
ENSPNAG00000023526pabpn19066.822ENSLOCG00000004694pabpn1l9966.822Lepisosteus_oculatus
ENSPNAG00000023526pabpn16584.211ENSLAFG00000031227-10084.211Loxodonta_africana
ENSPNAG00000023526pabpn19973.820ENSMFAG00000032183BCL2L2-PABPN19483.929Macaca_fascicularis
ENSPNAG00000023526pabpn16176.056ENSMFAG00000031355-9976.056Macaca_fascicularis
ENSPNAG00000023526pabpn18669.268ENSMMUG00000048382-8959.630Macaca_mulatta
ENSPNAG00000023526pabpn19973.820ENSMMUG00000014747BCL2L2-PABPN110083.673Macaca_mulatta
ENSPNAG00000023526pabpn17970.053ENSMNEG00000035750-9976.056Macaca_nemestrina
ENSPNAG00000023526pabpn19977.253ENSMNEG00000045065BCL2L2-PABPN18477.682Macaca_nemestrina
ENSPNAG00000023526pabpn19973.820ENSMLEG00000043862BCL2L2-PABPN19483.929Mandrillus_leucophaeus
ENSPNAG00000023526pabpn17267.066ENSMLEG00000034623-9973.944Mandrillus_leucophaeus
ENSPNAG00000023526pabpn19996.943ENSMAMG00000007979pabpn110095.423Mastacembelus_armatus
ENSPNAG00000023526pabpn19996.831ENSMZEG00005011904pabpn110096.831Maylandia_zebra
ENSPNAG00000023526pabpn19973.820ENSMAUG00000007383Gm205218771.756Mesocricetus_auratus
ENSPNAG00000023526pabpn19977.682ENSMICG00000010002BCL2L2-PABPN18478.390Microcebus_murinus
ENSPNAG00000023526pabpn19973.391ENSMOCG00000018557Gm205219092.517Microtus_ochrogaster
ENSPNAG00000023526pabpn110098.707ENSMMOG00000005405pabpn110098.707Mola_mola
ENSPNAG00000023526pabpn18580.693ENSMODG00000004535-8271.032Monodelphis_domestica
ENSPNAG00000023526pabpn19998.253ENSMALG00000019612pabpn110095.775Monopterus_albus
ENSPNAG00000023526pabpn19972.961MGP_CAROLIEiJ_G0019276Gm205217072.961Mus_caroli
ENSPNAG00000023526pabpn18682.524MGP_CAROLIEiJ_G0019277Pabpn19091.837Mus_caroli
ENSPNAG00000023526pabpn19973.391ENSMUSG00000092232Gm205217073.391Mus_musculus
ENSPNAG00000023526pabpn18683.010ENSMUSG00000022194Pabpn19091.837Mus_musculus
ENSPNAG00000023526pabpn19973.391MGP_PahariEiJ_G0030294Gm205217073.391Mus_pahari
ENSPNAG00000023526pabpn18683.010MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSPNAG00000023526pabpn18683.010MGP_SPRETEiJ_G0020166Pabpn19091.837Mus_spretus
ENSPNAG00000023526pabpn19973.391MGP_SPRETEiJ_G0020165Gm205217073.391Mus_spretus
ENSPNAG00000023526pabpn16683.974ENSMPUG00000006775-9283.974Mustela_putorius_furo
ENSPNAG00000023526pabpn18482.828ENSMLUG00000028677-8574.576Myotis_lucifugus
ENSPNAG00000023526pabpn18184.737ENSMLUG00000003800-10084.737Myotis_lucifugus
ENSPNAG00000023526pabpn18880.952ENSMLUG00000012452-8272.222Myotis_lucifugus
ENSPNAG00000023526pabpn19974.249ENSNGAG00000019529Gm205217074.249Nannospalax_galili
ENSPNAG00000023526pabpn19996.479ENSNBRG00000023955pabpn110097.727Neolamprologus_brichardi
ENSPNAG00000023526pabpn18670.244ENSNLEG00000030598-7771.579Nomascus_leucogenys
ENSPNAG00000023526pabpn19973.820ENSNLEG00000015007-7483.732Nomascus_leucogenys
ENSPNAG00000023526pabpn16461.486ENSNLEG00000035292-9961.486Nomascus_leucogenys
ENSPNAG00000023526pabpn19973.391ENSODEG00000002083BCL2L2-PABPN16883.254Octodon_degus
ENSPNAG00000023526pabpn18674.877ENSODEG00000003739-8863.424Octodon_degus
ENSPNAG00000023526pabpn17673.743ENSODEG00000011555-8972.619Octodon_degus
ENSPNAG00000023526pabpn19996.479ENSONIG00000008112pabpn110096.479Oreochromis_niloticus
ENSPNAG00000023526pabpn16385.714ENSOANG00000009218-10085.714Ornithorhynchus_anatinus
ENSPNAG00000023526pabpn18683.495ENSOCUG00000016174PABPN19571.756Oryctolagus_cuniculus
ENSPNAG00000023526pabpn19997.380ENSORLG00000027900pabpn110095.423Oryzias_latipes
ENSPNAG00000023526pabpn19997.380ENSORLG00020004681pabpn110092.808Oryzias_latipes_hni
ENSPNAG00000023526pabpn110097.845ENSORLG00015000018pabpn110097.845Oryzias_latipes_hsok
ENSPNAG00000023526pabpn19995.423ENSOMEG00000016618pabpn110095.423Oryzias_melastigma
ENSPNAG00000023526pabpn18683.981ENSOGAG00000008710PABPN18671.970Otolemur_garnettii
ENSPNAG00000023526pabpn19973.820ENSOARG00000019336BCL2L2-PABPN16473.820Ovis_aries
ENSPNAG00000023526pabpn19973.820ENSPPAG00000028984BCL2L2-PABPN19283.974Pan_paniscus
ENSPNAG00000023526pabpn17168.675ENSPPAG00000039421-9368.675Pan_paniscus
ENSPNAG00000023526pabpn18683.981ENSPPRG00000010567PABPN18671.970Panthera_pardus
ENSPNAG00000023526pabpn17183.929ENSPTIG00000001063BCL2L2-PABPN19483.929Panthera_tigris_altaica
ENSPNAG00000023526pabpn19977.253ENSPTRG00000006167BCL2L28477.682Pan_troglodytes
ENSPNAG00000023526pabpn110064.103ENSPTRG00000047273-9361.508Pan_troglodytes
ENSPNAG00000023526pabpn19977.253ENSPANG00000021100BCL2L2-PABPN18477.682Papio_anubis
ENSPNAG00000023526pabpn18470.707ENSPANG00000023326-9976.761Papio_anubis
ENSPNAG00000023526pabpn19996.507ENSPKIG00000008144-10096.127Paramormyrops_kingsleyae
ENSPNAG00000023526pabpn110092.704ENSPKIG00000018052pabpn110095.708Paramormyrops_kingsleyae
ENSPNAG00000023526pabpn17170.122ENSPKIG00000008340pabpn1l8667.598Paramormyrops_kingsleyae
ENSPNAG00000023526pabpn15876.866ENSPSIG00000011959-9576.866Pelodiscus_sinensis
ENSPNAG00000023526pabpn19597.273ENSPMGG00000022027pabpn110090.877Periophthalmus_magnuspinnatus
ENSPNAG00000023526pabpn19973.820ENSPEMG00000008332Gm205218992.517Peromyscus_maniculatus_bairdii
ENSPNAG00000023526pabpn17976.882ENSPMAG00000006212pabpn19966.260Petromyzon_marinus
ENSPNAG00000023526pabpn18681.463ENSPCIG00000027751-8671.591Phascolarctos_cinereus
ENSPNAG00000023526pabpn110095.726ENSPFOG00000010351pabpn19995.726Poecilia_formosa
ENSPNAG00000023526pabpn19996.104ENSPLAG00000022696pabpn110095.455Poecilia_latipinna
ENSPNAG00000023526pabpn110095.726ENSPMEG00000020856pabpn110095.726Poecilia_mexicana
ENSPNAG00000023526pabpn110096.154ENSPREG00000011278pabpn110096.154Poecilia_reticulata
ENSPNAG00000023526pabpn18184.021ENSPPYG00000005663PABPN18971.429Pongo_abelii
ENSPNAG00000023526pabpn17970.312ENSPCAG00000005902PABPN18460.800Procavia_capensis
ENSPNAG00000023526pabpn19977.682ENSPCOG00000028047BCL2L2-PABPN18478.390Propithecus_coquereli
ENSPNAG00000023526pabpn18882.297ENSPVAG00000005270PABPN18670.722Pteropus_vampyrus
ENSPNAG00000023526pabpn110098.276ENSPNYG00000013182pabpn110098.276Pundamilia_nyererei
ENSPNAG00000023526pabpn18683.495ENSRNOG00000042195Pabpn18571.756Rattus_norvegicus
ENSPNAG00000023526pabpn19473.303ENSRBIG00000040762BCL2L2-PABPN16873.303Rhinopithecus_bieti
ENSPNAG00000023526pabpn18972.642ENSRBIG00000039547-8266.964Rhinopithecus_bieti
ENSPNAG00000023526pabpn18872.727ENSRBIG00000042811-9568.722Rhinopithecus_bieti
ENSPNAG00000023526pabpn18869.194ENSRROG00000036409-7065.939Rhinopithecus_roxellana
ENSPNAG00000023526pabpn19473.303ENSRROG00000045535BCL2L2-PABPN19483.929Rhinopithecus_roxellana
ENSPNAG00000023526pabpn18873.430ENSRROG00000040409-8267.411Rhinopithecus_roxellana
ENSPNAG00000023526pabpn19969.919ENSSBOG00000026930BCL2L2-PABPN19283.974Saimiri_boliviensis_boliviensis
ENSPNAG00000023526pabpn18183.069ENSSHAG00000014841-8785.263Sarcophilus_harrisii
ENSPNAG00000023526pabpn19963.445ENSSHAG00000007707-9963.445Sarcophilus_harrisii
ENSPNAG00000023526pabpn110097.845ENSSFOG00015014718pabpn110097.845Scleropages_formosus
ENSPNAG00000023526pabpn110091.416ENSSFOG00015012565pabpn110091.416Scleropages_formosus
ENSPNAG00000023526pabpn16174.648ENSSFOG00015015833pabpn1l8466.667Scleropages_formosus
ENSPNAG00000023526pabpn110097.845ENSSMAG00000020157pabpn110097.845Scophthalmus_maximus
ENSPNAG00000023526pabpn19997.817ENSSDUG00000020582pabpn110096.127Seriola_dumerili
ENSPNAG00000023526pabpn110098.276ENSSLDG00000007118pabpn110098.276Seriola_lalandi_dorsalis
ENSPNAG00000023526pabpn17184.524ENSSPUG00000018308-9484.524Sphenodon_punctatus
ENSPNAG00000023526pabpn110097.425ENSSPAG00000021658pabpn110097.425Stegastes_partitus
ENSPNAG00000023526pabpn19263.594ENSSSCG00000034805-7959.716Sus_scrofa
ENSPNAG00000023526pabpn19973.820ENSSSCG00000002023PABPN18671.970Sus_scrofa
ENSPNAG00000023526pabpn110096.552ENSTRUG00000023664pabpn110096.552Takifugu_rubripes
ENSPNAG00000023526pabpn19292.093ENSTNIG00000005369pabpn19396.517Tetraodon_nigroviridis
ENSPNAG00000023526pabpn18683.981ENSUAMG00000024460PABPN16883.732Ursus_americanus
ENSPNAG00000023526pabpn19973.820ENSUMAG00000014288BCL2L2-PABPN17073.820Ursus_maritimus
ENSPNAG00000023526pabpn19973.820ENSVVUG00000019912BCL2L2-PABPN17684.536Vulpes_vulpes
ENSPNAG00000023526pabpn18485.714ENSXETG00000014597pabpn17382.407Xenopus_tropicalis
ENSPNAG00000023526pabpn17386.628ENSXCOG00000005158pabpn19886.628Xiphophorus_couchianus
ENSPNAG00000023526pabpn110096.581ENSXMAG00000006196pabpn110096.581Xiphophorus_maculatus

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