EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000023644 (Gene tree)
Gene ID: 108424905
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 13628 bases
Position: chrKV575312.1:3741788-3755415
Accession: 108424905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000017381	zf-C2H2	PF00096.26	6.2e-35	1	6
ENSPNAP00000017381	zf-C2H2	PF00096.26	6.2e-35	2	6
ENSPNAP00000017381	zf-C2H2	PF00096.26	6.2e-35	3	6
ENSPNAP00000017381	zf-C2H2	PF00096.26	6.2e-35	4	6
ENSPNAP00000017381	zf-C2H2	PF00096.26	6.2e-35	5	6
ENSPNAP00000017381	zf-C2H2	PF00096.26	6.2e-35	6	6
ENSPNAP00000017381	zf-met	PF12874.7	1.5e-25	1	5
ENSPNAP00000017381	zf-met	PF12874.7	1.5e-25	2	5
ENSPNAP00000017381	zf-met	PF12874.7	1.5e-25	3	5
ENSPNAP00000017381	zf-met	PF12874.7	1.5e-25	4	5
ENSPNAP00000017381	zf-met	PF12874.7	1.5e-25	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000026144	-	6106	XM_017693222	ENSPNAP00000017381	1284 (aa)	XP_017548711	-

Gene Model

Click here to download ENSPNAG00000023644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023644's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000023644	sall1a	64	50.980	ENSPNAG00000017138	znf236	93	50.980
ENSPNAG00000023644	sall1a	86	63.462	ENSPNAG00000017141	sall3b	90	63.462
ENSPNAG00000023644	sall1a	59	44.068	ENSPNAG00000007237	-	81	44.068
ENSPNAG00000023644	sall1a	99	53.060	ENSPNAG00000007442	sall1b	99	52.972
ENSPNAG00000023644	sall1a	99	65.306	ENSPNAG00000028248	-	97	65.306
ENSPNAG00000023644	sall1a	84	76.471	ENSPNAG00000020929	sall4	90	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000023644	sall1a	99	67.166	ENSG00000103449	SALL1	100	66.781	Homo_sapiens
ENSPNAG00000023644	sall1a	100	79.924	ENSAPOG00000022764	sall1a	100	79.924	Acanthochromis_polyacanthus
ENSPNAG00000023644	sall1a	99	65.641	ENSAMEG00000006817	SALL1	100	66.467	Ailuropoda_melanoleuca
ENSPNAG00000023644	sall1a	100	79.513	ENSACIG00000004231	sall1a	100	79.132	Amphilophus_citrinellus
ENSPNAG00000023644	sall1a	100	80.076	ENSAOCG00000002800	sall1a	100	80.076	Amphiprion_ocellaris
ENSPNAG00000023644	sall1a	100	79.848	ENSAPEG00000010179	sall1a	100	79.848	Amphiprion_percula
ENSPNAG00000023644	sall1a	99	79.376	ENSATEG00000003006	sall1a	99	78.995	Anabas_testudineus
ENSPNAG00000023644	sall1a	100	68.318	ENSAPLG00000003356	SALL1	100	68.666	Anas_platyrhynchos
ENSPNAG00000023644	sall1a	99	67.244	ENSACAG00000014399	SALL1	97	67.169	Anolis_carolinensis
ENSPNAG00000023644	sall1a	99	67.316	ENSANAG00000027238	SALL1	99	67.491	Aotus_nancymaae
ENSPNAG00000023644	sall1a	100	78.827	ENSACLG00000017148	sall1a	100	78.370	Astatotilapia_calliptera
ENSPNAG00000023644	sall1a	99	51.484	ENSAMXG00000017702	sall1b	99	51.808	Astyanax_mexicanus
ENSPNAG00000023644	sall1a	100	92.366	ENSAMXG00000018599	sall1a	100	92.366	Astyanax_mexicanus
ENSPNAG00000023644	sall1a	99	65.967	ENSBTAG00000008544	SALL1	100	66.542	Bos_taurus
ENSPNAG00000023644	sall1a	99	67.466	ENSCJAG00000001740	SALL1	99	67.464	Callithrix_jacchus
ENSPNAG00000023644	sall1a	99	65.993	ENSCAFG00000009755	SALL1	100	66.766	Canis_familiaris
ENSPNAG00000023644	sall1a	99	65.993	ENSCAFG00020002842	SALL1	100	66.766	Canis_lupus_dingo
ENSPNAG00000023644	sall1a	100	66.043	ENSCHIG00000026074	SALL1	100	66.442	Capra_hircus
ENSPNAG00000023644	sall1a	99	67.862	ENSTSYG00000029464	SALL1	99	67.862	Carlito_syrichta
ENSPNAG00000023644	sall1a	98	66.590	ENSCPOG00000006564	SALL1	99	67.328	Cavia_porcellus
ENSPNAG00000023644	sall1a	99	65.370	ENSCCAG00000001639	SALL1	99	65.543	Cebus_capucinus
ENSPNAG00000023644	sall1a	99	67.391	ENSCATG00000004982	SALL1	99	67.640	Cercocebus_atys
ENSPNAG00000023644	sall1a	99	66.467	ENSCLAG00000006380	SALL1	99	67.040	Chinchilla_lanigera
ENSPNAG00000023644	sall1a	99	66.942	ENSCSAG00000005319	SALL1	100	66.891	Chlorocebus_sabaeus
ENSPNAG00000023644	sall1a	63	65.882	ENSCHOG00000000800	-	69	65.882	Choloepus_hoffmanni
ENSPNAG00000023644	sall1a	100	68.666	ENSCPBG00000015924	SALL1	100	68.839	Chrysemys_picta_bellii
ENSPNAG00000023644	sall1a	99	67.466	ENSCANG00000036664	SALL1	100	67.232	Colobus_angolensis_palliatus
ENSPNAG00000023644	sall1a	99	65.273	ENSCGRG00001023314	-	100	66.071	Cricetulus_griseus_chok1gshd
ENSPNAG00000023644	sall1a	98	65.347	ENSCGRG00000009496	Sall1	100	66.161	Cricetulus_griseus_crigri
ENSPNAG00000023644	sall1a	99	77.052	ENSCSEG00000009349	sall1a	99	78.056	Cynoglossus_semilaevis
ENSPNAG00000023644	sall1a	90	77.009	ENSCVAG00000020513	sall1a	99	76.581	Cyprinodon_variegatus
ENSPNAG00000023644	sall1a	100	83.359	ENSDARG00000074319	sall1a	100	83.359	Danio_rerio
ENSPNAG00000023644	sall1a	99	46.657	ENSDARG00000075891	sall1b	99	45.680	Danio_rerio
ENSPNAG00000023644	sall1a	99	65.750	ENSDNOG00000016413	SALL1	99	66.642	Dasypus_novemcinctus
ENSPNAG00000023644	sall1a	98	66.210	ENSETEG00000015150	SALL1	99	66.920	Echinops_telfairi
ENSPNAG00000023644	sall1a	62	44.104	ENSEBUG00000008798	SALL1	94	36.801	Eptatretus_burgeri
ENSPNAG00000023644	sall1a	66	59.184	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSPNAG00000023644	sall1a	99	65.921	ENSEASG00005014602	SALL1	100	67.041	Equus_asinus_asinus
ENSPNAG00000023644	sall1a	90	63.928	ENSECAG00000011334	SALL1	99	64.711	Equus_caballus
ENSPNAG00000023644	sall1a	98	66.438	ENSEEUG00000002014	SALL1	100	66.844	Erinaceus_europaeus
ENSPNAG00000023644	sall1a	100	75.771	ENSELUG00000006159	sall1a	100	75.842	Esox_lucius
ENSPNAG00000023644	sall1a	100	52.919	ENSELUG00000017774	-	100	53.150	Esox_lucius
ENSPNAG00000023644	sall1a	99	65.269	ENSFCAG00000024654	SALL1	100	66.417	Felis_catus
ENSPNAG00000023644	sall1a	100	68.318	ENSFALG00000000074	SALL1	100	68.468	Ficedula_albicollis
ENSPNAG00000023644	sall1a	73	62.500	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSPNAG00000023644	sall1a	100	78.479	ENSFHEG00000012579	sall1a	100	78.023	Fundulus_heteroclitus
ENSPNAG00000023644	sall1a	86	42.379	ENSGMOG00000013383	-	99	40.149	Gadus_morhua
ENSPNAG00000023644	sall1a	100	76.212	ENSGMOG00000006103	sall1a	100	76.061	Gadus_morhua
ENSPNAG00000023644	sall1a	100	68.642	ENSGALG00000039238	SALL1	100	68.717	Gallus_gallus
ENSPNAG00000023644	sall1a	100	78.512	ENSGAFG00000009964	sall1a	100	78.056	Gambusia_affinis
ENSPNAG00000023644	sall1a	99	77.930	ENSGACG00000016702	sall1a	99	77.626	Gasterosteus_aculeatus
ENSPNAG00000023644	sall1a	100	68.441	ENSGAGG00000013979	SALL1	100	68.764	Gopherus_agassizii
ENSPNAG00000023644	sall1a	99	67.391	ENSGGOG00000000663	SALL1	99	67.391	Gorilla_gorilla
ENSPNAG00000023644	sall1a	100	78.903	ENSHBUG00000022005	sall1a	100	78.446	Haplochromis_burtoni
ENSPNAG00000023644	sall1a	99	66.766	ENSHGLG00000004288	-	100	67.437	Heterocephalus_glaber_female
ENSPNAG00000023644	sall1a	99	66.766	ENSHGLG00100017496	SALL1	100	67.437	Heterocephalus_glaber_male
ENSPNAG00000023644	sall1a	100	75.189	ENSHCOG00000000974	sall1a	100	74.887	Hippocampus_comes
ENSPNAG00000023644	sall1a	99	48.411	ENSIPUG00000022928	sall1b	99	48.865	Ictalurus_punctatus
ENSPNAG00000023644	sall1a	100	89.084	ENSIPUG00000016265	SALL1	100	89.084	Ictalurus_punctatus
ENSPNAG00000023644	sall1a	99	66.319	ENSSTOG00000020885	SALL1	100	66.543	Ictidomys_tridecemlineatus
ENSPNAG00000023644	sall1a	100	78.707	ENSKMAG00000016681	sall1a	100	78.327	Kryptolebias_marmoratus
ENSPNAG00000023644	sall1a	98	77.216	ENSLBEG00000012207	sall1a	96	76.827	Labrus_bergylta
ENSPNAG00000023644	sall1a	100	67.092	ENSLACG00000003556	SALL1	100	67.393	Latimeria_chalumnae
ENSPNAG00000023644	sall1a	91	37.971	ENSLACG00000014018	-	93	38.177	Latimeria_chalumnae
ENSPNAG00000023644	sall1a	100	76.679	ENSLOCG00000007283	sall1b	100	76.581	Lepisosteus_oculatus
ENSPNAG00000023644	sall1a	98	67.096	ENSLAFG00000015251	SALL1	99	67.069	Loxodonta_africana
ENSPNAG00000023644	sall1a	99	67.466	ENSMFAG00000003298	SALL1	100	67.440	Macaca_fascicularis
ENSPNAG00000023644	sall1a	92	67.098	ENSMMUG00000017200	SALL1	100	67.070	Macaca_mulatta
ENSPNAG00000023644	sall1a	92	67.098	ENSMNEG00000034770	SALL1	100	67.044	Macaca_nemestrina
ENSPNAG00000023644	sall1a	99	67.541	ENSMLEG00000036406	SALL1	100	67.232	Mandrillus_leucophaeus
ENSPNAG00000023644	sall1a	99	79.696	ENSMAMG00000004164	sall1a	99	79.316	Mastacembelus_armatus
ENSPNAG00000023644	sall1a	100	78.827	ENSMZEG00005006479	sall1a	100	78.370	Maylandia_zebra
ENSPNAG00000023644	sall1a	98	68.654	ENSMGAG00000004704	SALL1	100	68.731	Meleagris_gallopavo
ENSPNAG00000023644	sall1a	99	64.653	ENSMAUG00000019093	Sall1	100	65.182	Mesocricetus_auratus
ENSPNAG00000023644	sall1a	100	67.091	ENSMICG00000036486	SALL1	100	67.240	Microcebus_murinus
ENSPNAG00000023644	sall1a	99	78.555	ENSMMOG00000016400	sall1a	99	78.175	Mola_mola
ENSPNAG00000023644	sall1a	99	67.468	ENSMODG00000013114	SALL1	99	67.790	Monodelphis_domestica
ENSPNAG00000023644	sall1a	99	78.218	ENSMALG00000013400	sall1a	99	78.691	Monopterus_albus
ENSPNAG00000023644	sall1a	99	65.370	MGP_CAROLIEiJ_G0031362	Sall1	100	65.801	Mus_caroli
ENSPNAG00000023644	sall1a	99	65.370	ENSMUSG00000031665	Sall1	100	65.752	Mus_musculus
ENSPNAG00000023644	sall1a	99	65.022	MGP_PahariEiJ_G0022961	Sall1	100	65.499	Mus_pahari
ENSPNAG00000023644	sall1a	99	65.445	MGP_SPRETEiJ_G0032480	Sall1	100	65.827	Mus_spretus
ENSPNAG00000023644	sall1a	98	65.753	ENSMPUG00000003265	SALL1	96	66.187	Mustela_putorius_furo
ENSPNAG00000023644	sall1a	98	63.961	ENSMLUG00000015541	SALL1	100	65.250	Myotis_lucifugus
ENSPNAG00000023644	sall1a	100	78.979	ENSNBRG00000009307	sall1a	100	78.522	Neolamprologus_brichardi
ENSPNAG00000023644	sall1a	93	78.238	ENSNLEG00000001008	SALL1	99	78.238	Nomascus_leucogenys
ENSPNAG00000023644	sall1a	99	67.769	ENSMEUG00000012206	SALL1	99	67.817	Notamacropus_eugenii
ENSPNAG00000023644	sall1a	89	73.009	ENSOPRG00000005645	SALL1	72	73.894	Ochotona_princeps
ENSPNAG00000023644	sall1a	99	66.792	ENSODEG00000003685	SALL1	100	67.341	Octodon_degus
ENSPNAG00000023644	sall1a	100	79.284	ENSONIG00000002831	sall1a	100	78.827	Oreochromis_niloticus
ENSPNAG00000023644	sall1a	90	66.304	ENSOANG00000013399	SALL1	96	78.423	Ornithorhynchus_anatinus
ENSPNAG00000023644	sall1a	100	78.023	ENSORLG00000013827	sall1a	100	78.188	Oryzias_latipes
ENSPNAG00000023644	sall1a	100	78.099	ENSORLG00020020570	sall1a	100	77.795	Oryzias_latipes_hni
ENSPNAG00000023644	sall1a	100	77.947	ENSORLG00015018830	sall1a	100	78.104	Oryzias_latipes_hsok
ENSPNAG00000023644	sall1a	100	77.871	ENSOMEG00000016043	sall1a	100	77.490	Oryzias_melastigma
ENSPNAG00000023644	sall1a	99	67.440	ENSOGAG00000027316	SALL1	100	67.390	Otolemur_garnettii
ENSPNAG00000023644	sall1a	100	62.378	ENSOARG00000017583	SALL1	100	62.752	Ovis_aries
ENSPNAG00000023644	sall1a	99	48.946	ENSPPAG00000035136	-	99	49.849	Pan_paniscus
ENSPNAG00000023644	sall1a	98	67.661	ENSPPAG00000035657	SALL1	99	67.661	Pan_paniscus
ENSPNAG00000023644	sall1a	99	65.195	ENSPPRG00000023283	SALL1	100	66.343	Panthera_pardus
ENSPNAG00000023644	sall1a	81	66.882	ENSPTIG00000013539	-	94	63.462	Panthera_tigris_altaica
ENSPNAG00000023644	sall1a	99	67.590	ENSPTRG00000008108	SALL1	99	67.713	Pan_troglodytes
ENSPNAG00000023644	sall1a	97	49.767	ENSPTRG00000045256	-	98	50.938	Pan_troglodytes
ENSPNAG00000023644	sall1a	99	67.466	ENSPANG00000024176	SALL1	100	67.515	Papio_anubis
ENSPNAG00000023644	sall1a	100	71.160	ENSPKIG00000022251	sall1a	100	71.310	Paramormyrops_kingsleyae
ENSPNAG00000023644	sall1a	100	70.152	ENSPKIG00000005383	-	100	70.348	Paramormyrops_kingsleyae
ENSPNAG00000023644	sall1a	100	68.567	ENSPSIG00000008582	SALL1	100	68.666	Pelodiscus_sinensis
ENSPNAG00000023644	sall1a	99	74.474	ENSPMGG00000021788	sall1a	99	74.024	Periophthalmus_magnuspinnatus
ENSPNAG00000023644	sall1a	52	56.503	ENSPMAG00000008148	sall1b	97	47.506	Petromyzon_marinus
ENSPNAG00000023644	sall1a	99	67.618	ENSPCIG00000017840	SALL1	99	67.667	Phascolarctos_cinereus
ENSPNAG00000023644	sall1a	98	78.533	ENSPFOG00000015799	sall1a	96	78.069	Poecilia_formosa
ENSPNAG00000023644	sall1a	100	78.740	ENSPLAG00000022539	sall1a	100	78.284	Poecilia_latipinna
ENSPNAG00000023644	sall1a	100	78.967	ENSPMEG00000020894	sall1a	100	78.512	Poecilia_mexicana
ENSPNAG00000023644	sall1a	100	78.804	ENSPREG00000006802	sall1a	100	78.350	Poecilia_reticulata
ENSPNAG00000023644	sall1a	90	66.106	ENSPPYG00000007345	SALL1	96	66.050	Pongo_abelii
ENSPNAG00000023644	sall1a	84	69.136	ENSPCAG00000008162	SALL1	93	69.136	Procavia_capensis
ENSPNAG00000023644	sall1a	99	66.667	ENSPCOG00000028192	SALL1	100	67.537	Propithecus_coquereli
ENSPNAG00000023644	sall1a	66	67.667	ENSPVAG00000015374	SALL1	100	67.853	Pteropus_vampyrus
ENSPNAG00000023644	sall1a	100	78.903	ENSPNYG00000010865	sall1a	100	78.446	Pundamilia_nyererei
ENSPNAG00000023644	sall1a	99	65.644	ENSRNOG00000013907	Sall1	100	65.695	Rattus_norvegicus
ENSPNAG00000023644	sall1a	92	67.340	ENSRBIG00000015707	SALL1	100	67.286	Rhinopithecus_bieti
ENSPNAG00000023644	sall1a	98	67.942	ENSRROG00000035777	SALL1	100	67.393	Rhinopithecus_roxellana
ENSPNAG00000023644	sall1a	99	67.391	ENSSBOG00000032186	SALL1	99	67.416	Saimiri_boliviensis_boliviensis
ENSPNAG00000023644	sall1a	99	67.543	ENSSHAG00000009477	SALL1	99	67.643	Sarcophilus_harrisii
ENSPNAG00000023644	sall1a	98	71.055	ENSSFOG00015001590	sall1a	99	71.132	Scleropages_formosus
ENSPNAG00000023644	sall1a	100	71.439	ENSSFOG00015020020	sall1a	100	71.741	Scleropages_formosus
ENSPNAG00000023644	sall1a	99	79.376	ENSSMAG00000009160	sall1a	99	78.919	Scophthalmus_maximus
ENSPNAG00000023644	sall1a	99	80.137	ENSSDUG00000006507	sall1a	99	79.985	Seriola_dumerili
ENSPNAG00000023644	sall1a	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSPNAG00000023644	sall1a	99	80.137	ENSSLDG00000017721	sall1a	99	80.061	Seriola_lalandi_dorsalis
ENSPNAG00000023644	sall1a	98	65.983	ENSSARG00000000661	SALL1	100	66.844	Sorex_araneus
ENSPNAG00000023644	sall1a	100	67.868	ENSSPUG00000000156	SALL1	100	68.216	Sphenodon_punctatus
ENSPNAG00000023644	sall1a	100	80.015	ENSSPAG00000021615	sall1a	100	80.015	Stegastes_partitus
ENSPNAG00000023644	sall1a	99	65.894	ENSSSCG00000002836	SALL1	100	66.518	Sus_scrofa
ENSPNAG00000023644	sall1a	100	68.468	ENSTGUG00000007514	SALL1	100	68.619	Taeniopygia_guttata
ENSPNAG00000023644	sall1a	91	76.063	ENSTRUG00000008950	sall1a	100	75.646	Takifugu_rubripes
ENSPNAG00000023644	sall1a	92	76.266	ENSTNIG00000004257	sall1a	100	75.851	Tetraodon_nigroviridis
ENSPNAG00000023644	sall1a	61	74.658	ENSTBEG00000002119	-	51	78.231	Tupaia_belangeri
ENSPNAG00000023644	sall1a	90	65.152	ENSUAMG00000023379	-	92	65.630	Ursus_americanus
ENSPNAG00000023644	sall1a	90	65.017	ENSVVUG00000019383	-	99	65.141	Vulpes_vulpes
ENSPNAG00000023644	sall1a	97	35.106	ENSXETG00000017176	sall2	98	34.554	Xenopus_tropicalis
ENSPNAG00000023644	sall1a	100	63.716	ENSXETG00000018417	sall1	100	63.716	Xenopus_tropicalis
ENSPNAG00000023644	sall1a	100	78.664	ENSXMAG00000016273	sall1a	100	78.208	Xiphophorus_maculatus