EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000023844 (Gene tree)
Gene ID: 108442882
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 7652 bases
Position: chrKV575791.1:142669-150320
Accession: 108442882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000017561	RRM_1	PF00076.22	1.7e-30	1	2
ENSPNAP00000017561	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000026381	-	969	XM_017723161	ENSPNAP00000017561	322 (aa)	XP_017578650	-

Gene Model

Click here to download ENSPNAG00000023844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000023844	srsf4	52	60.440	ENSPNAG00000021333	srsf5a	97	49.470
ENSPNAG00000023844	srsf4	52	44.199	ENSPNAG00000003588	srsf9	73	43.889
ENSPNAG00000023844	srsf4	52	63.068	ENSPNAG00000011262	srsf5b	82	61.983

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000023844	srsf4	53	83.616	ENSG00000116350	SRSF4	64	79.310	Homo_sapiens
ENSPNAG00000023844	srsf4	53	74.860	ENSAPOG00000023399	-	60	75.281	Acanthochromis_polyacanthus
ENSPNAG00000023844	srsf4	53	90.230	ENSACIG00000018649	srsf4	98	91.176	Amphilophus_citrinellus
ENSPNAG00000023844	srsf4	53	83.616	ENSANAG00000037134	SRSF4	61	72.222	Aotus_nancymaae
ENSPNAG00000023844	srsf4	53	72.527	ENSACLG00000021269	-	96	55.172	Astatotilapia_calliptera
ENSPNAG00000023844	srsf4	54	88.571	ENSACLG00000003395	srsf4	90	91.176	Astatotilapia_calliptera
ENSPNAG00000023844	srsf4	91	69.697	ENSAMXG00000034811	srsf4	96	88.235	Astyanax_mexicanus
ENSPNAG00000023844	srsf4	52	49.246	WBGene00004698	rsp-1	97	51.034	Caenorhabditis_elegans
ENSPNAG00000023844	srsf4	53	83.616	ENSCJAG00000047192	SRSF4	50	72.222	Callithrix_jacchus
ENSPNAG00000023844	srsf4	53	83.616	ENSCATG00000031440	SRSF4	53	71.212	Cercocebus_atys
ENSPNAG00000023844	srsf4	53	83.616	ENSCSAG00000001022	SRSF4	53	71.212	Chlorocebus_sabaeus
ENSPNAG00000023844	srsf4	52	59.563	ENSCING00000011362	-	65	57.368	Ciona_intestinalis
ENSPNAG00000023844	srsf4	53	57.216	ENSCING00000020631	-	79	61.257	Ciona_intestinalis
ENSPNAG00000023844	srsf4	52	54.974	ENSCING00000024718	-	56	56.545	Ciona_intestinalis
ENSPNAG00000023844	srsf4	53	60.606	ENSCING00000012370	-	99	51.274	Ciona_intestinalis
ENSPNAG00000023844	srsf4	52	65.537	ENSCSAVG00000002581	-	69	63.687	Ciona_savignyi
ENSPNAG00000023844	srsf4	53	83.616	ENSCANG00000028667	SRSF4	53	71.212	Colobus_angolensis_palliatus
ENSPNAG00000023844	srsf4	54	85.561	ENSCSEG00000010058	srsf4	72	91.176	Cynoglossus_semilaevis
ENSPNAG00000023844	srsf4	54	87.912	ENSDARG00000105293	srsf4	74	93.590	Danio_rerio
ENSPNAG00000023844	srsf4	52	62.295	FBgn0004587	B52	95	59.375	Drosophila_melanogaster
ENSPNAG00000023844	srsf4	53	59.777	ENSEBUG00000001681	srsf4	67	59.551	Eptatretus_burgeri
ENSPNAG00000023844	srsf4	54	77.320	ENSELUG00000017551	srsf4	93	76.154	Esox_lucius
ENSPNAG00000023844	srsf4	53	89.385	ENSFHEG00000007472	srsf4	86	96.250	Fundulus_heteroclitus
ENSPNAG00000023844	srsf4	53	92.090	ENSGMOG00000012906	srsf4	56	92.000	Gadus_morhua
ENSPNAG00000023844	srsf4	54	91.573	ENSGAFG00000018496	srsf4	92	59.272	Gambusia_affinis
ENSPNAG00000023844	srsf4	54	91.061	ENSGACG00000002389	srsf4	55	91.429	Gasterosteus_aculeatus
ENSPNAG00000023844	srsf4	53	83.616	ENSGGOG00000002444	SRSF4	53	71.591	Gorilla_gorilla
ENSPNAG00000023844	srsf4	53	72.527	ENSHBUG00000011326	-	97	55.143	Haplochromis_burtoni
ENSPNAG00000023844	srsf4	75	93.939	ENSHCOG00000012540	srsf4	67	87.293	Hippocampus_comes
ENSPNAG00000023844	srsf4	54	89.560	ENSKMAG00000013631	srsf4	80	78.431	Kryptolebias_marmoratus
ENSPNAG00000023844	srsf4	53	71.823	ENSLOCG00000001442	-	96	52.528	Lepisosteus_oculatus
ENSPNAG00000023844	srsf4	53	83.616	ENSMFAG00000041784	SRSF4	53	71.212	Macaca_fascicularis
ENSPNAG00000023844	srsf4	53	83.616	ENSMNEG00000034931	SRSF4	53	71.212	Macaca_nemestrina
ENSPNAG00000023844	srsf4	53	83.616	ENSMLEG00000031619	SRSF4	53	71.212	Mandrillus_leucophaeus
ENSPNAG00000023844	srsf4	53	92.442	ENSMAMG00000004888	srsf4	67	93.023	Mastacembelus_armatus
ENSPNAG00000023844	srsf4	54	88.571	ENSMZEG00005026275	srsf4	72	89.655	Maylandia_zebra
ENSPNAG00000023844	srsf4	57	89.855	ENSMMOG00000013653	srsf4	98	64.407	Mola_mola
ENSPNAG00000023844	srsf4	53	84.181	ENSMODG00000011052	SRSF4	54	84.000	Monodelphis_domestica
ENSPNAG00000023844	srsf4	62	89.855	ENSMALG00000013392	srsf4	65	94.152	Monopterus_albus
ENSPNAG00000023844	srsf4	53	71.023	ENSNLEG00000030787	-	61	71.264	Nomascus_leucogenys
ENSPNAG00000023844	srsf4	53	83.616	ENSNLEG00000009916	SRSF4	53	71.212	Nomascus_leucogenys
ENSPNAG00000023844	srsf4	54	88.333	ENSORLG00020016052	srsf4	98	64.087	Oryzias_latipes_hni
ENSPNAG00000023844	srsf4	54	88.333	ENSORLG00015007566	srsf4	69	92.000	Oryzias_latipes_hsok
ENSPNAG00000023844	srsf4	54	88.333	ENSOMEG00000005541	srsf4	50	92.000	Oryzias_melastigma
ENSPNAG00000023844	srsf4	53	83.616	ENSPPAG00000028357	SRSF4	53	71.591	Pan_paniscus
ENSPNAG00000023844	srsf4	53	83.616	ENSPTRG00000000445	SRSF4	53	71.591	Pan_troglodytes
ENSPNAG00000023844	srsf4	53	83.616	ENSPANG00000021937	SRSF4	53	71.212	Papio_anubis
ENSPNAG00000023844	srsf4	54	81.443	ENSPMGG00000013436	srsf4	95	83.465	Periophthalmus_magnuspinnatus
ENSPNAG00000023844	srsf4	53	63.536	ENSPMAG00000009397	srsf4	67	63.536	Petromyzon_marinus
ENSPNAG00000023844	srsf4	54	91.573	ENSPLAG00000008812	srsf4	76	64.730	Poecilia_latipinna
ENSPNAG00000023844	srsf4	53	89.503	ENSPMEG00000023638	srsf4	52	89.385	Poecilia_mexicana
ENSPNAG00000023844	srsf4	53	83.616	ENSPCAG00000009879	SRSF4	62	65.909	Procavia_capensis
ENSPNAG00000023844	srsf4	54	86.813	ENSPNYG00000003796	srsf4	91	76.254	Pundamilia_nyererei
ENSPNAG00000023844	srsf4	53	83.616	ENSRBIG00000035789	SRSF4	53	71.212	Rhinopithecus_bieti
ENSPNAG00000023844	srsf4	53	83.616	ENSRROG00000029463	SRSF4	53	71.212	Rhinopithecus_roxellana
ENSPNAG00000023844	srsf4	53	83.616	ENSSBOG00000027098	SRSF4	50	72.222	Saimiri_boliviensis_boliviensis
ENSPNAG00000023844	srsf4	53	94.737	ENSSFOG00015020292	srsf4	82	91.892	Scleropages_formosus
ENSPNAG00000023844	srsf4	54	90.000	ENSSDUG00000007387	srsf4	91	69.536	Seriola_dumerili
ENSPNAG00000023844	srsf4	54	78.857	ENSSLDG00000009745	srsf4	60	78.947	Seriola_lalandi_dorsalis
ENSPNAG00000023844	srsf4	62	89.855	ENSSPAG00000014538	srsf4	83	92.373	Stegastes_partitus
ENSPNAG00000023844	srsf4	84	67.474	ENSTRUG00000011891	srsf4	61	84.127	Takifugu_rubripes
ENSPNAG00000023844	srsf4	53	70.213	ENSXCOG00000003212	-	54	71.505	Xiphophorus_couchianus
ENSPNAG00000023844	srsf4	54	89.071	ENSXCOG00000018826	srsf4	89	86.441	Xiphophorus_couchianus