EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000023854 (Gene tree)
Gene ID: 108437262
Gene Symbol: larp6b
Alias: im:7142825|wu:fa55b04|zgc:162969
Full Name: la-related protein 6-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 2981 bases
Position: chrKV575515.1:1040891-1043871
Accession: 108437262
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000017580	La	PF05383.17	3.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000026421	-	2559	XM_017714247	ENSPNAP00000017580	480 (aa)	XP_017569736	UPI000814400A

Gene Model

Click here to download ENSPNAG00000023854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000023854	larp6b	88	39.450	ENSPNAG00000017966	larp6a	69	40.359
ENSPNAG00000023854	larp6b	89	34.821	ENSPNAG00000008072	-	92	37.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000023854	larp6b	65	47.556	ENSAPOG00000003568	-	82	47.556	Acanthochromis_polyacanthus
ENSPNAG00000023854	larp6b	51	42.742	ENSACIG00000008349	-	58	42.742	Amphilophus_citrinellus
ENSPNAG00000023854	larp6b	84	38.424	ENSAOCG00000004646	larp6b	88	38.424	Amphiprion_ocellaris
ENSPNAG00000023854	larp6b	88	38.118	ENSAPEG00000022748	-	90	38.118	Amphiprion_percula
ENSPNAG00000023854	larp6b	85	38.049	ENSATEG00000021222	-	88	38.049	Anabas_testudineus
ENSPNAG00000023854	larp6b	86	37.260	ENSACLG00000009988	larp6b	89	37.349	Astatotilapia_calliptera
ENSPNAG00000023854	larp6b	99	81.837	ENSAMXG00000018956	larp6b	99	81.837	Astyanax_mexicanus
ENSPNAG00000023854	larp6b	88	33.409	ENSCING00000008613	-	85	33.258	Ciona_intestinalis
ENSPNAG00000023854	larp6b	51	38.153	ENSCSAVG00000011718	-	84	38.153	Ciona_savignyi
ENSPNAG00000023854	larp6b	99	72.059	ENSDARG00000003968	larp6b	100	77.612	Danio_rerio
ENSPNAG00000023854	larp6b	99	64.033	ENSELUG00000021677	larp6b	99	64.033	Esox_lucius
ENSPNAG00000023854	larp6b	84	35.802	ENSGAFG00000020138	-	83	35.802	Gambusia_affinis
ENSPNAG00000023854	larp6b	86	37.019	ENSHBUG00000012344	larp6b	88	37.108	Haplochromis_burtoni
ENSPNAG00000023854	larp6b	99	73.319	ENSIPUG00000007609	larp6b	100	74.580	Ictalurus_punctatus
ENSPNAG00000023854	larp6b	83	38.557	ENSLBEG00000016460	-	93	38.557	Labrus_bergylta
ENSPNAG00000023854	larp6b	85	38.592	ENSMAMG00000005509	-	86	38.592	Mastacembelus_armatus
ENSPNAG00000023854	larp6b	86	37.260	ENSMZEG00005024390	larp6b	89	37.349	Maylandia_zebra
ENSPNAG00000023854	larp6b	84	35.872	ENSNBRG00000012748	larp6b	87	35.872	Neolamprologus_brichardi
ENSPNAG00000023854	larp6b	99	57.113	ENSPKIG00000025605	larp6b	97	57.320	Paramormyrops_kingsleyae
ENSPNAG00000023854	larp6b	84	34.577	ENSPLAG00000005133	-	91	34.577	Poecilia_latipinna
ENSPNAG00000023854	larp6b	84	35.075	ENSPMEG00000019947	-	92	35.075	Poecilia_mexicana
ENSPNAG00000023854	larp6b	84	35.149	ENSPREG00000011853	-	82	35.149	Poecilia_reticulata
ENSPNAG00000023854	larp6b	84	36.919	ENSPNYG00000007025	larp6b	83	37.010	Pundamilia_nyererei
ENSPNAG00000023854	larp6b	56	44.444	ENSSDUG00000009842	-	79	43.682	Seriola_dumerili
ENSPNAG00000023854	larp6b	85	39.416	ENSSLDG00000017081	-	80	39.416	Seriola_lalandi_dorsalis
ENSPNAG00000023854	larp6b	84	39.120	ENSSPAG00000014320	-	85	39.853	Stegastes_partitus
ENSPNAG00000023854	larp6b	84	35.980	ENSXCOG00000018917	-	87	35.980	Xiphophorus_couchianus
ENSPNAG00000023854	larp6b	84	35.821	ENSXMAG00000025734	-	88	35.821	Xiphophorus_maculatus