EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000023871 (Gene tree)
Gene ID: 108417963
Gene Symbol: ppargc1b
Alias: fb55c08|perc1b|sb:cb520|si:bz1d10.4|wu:fb55c08
Full Name: peroxisome proliferator-activated receptor gamma coactivator 1-beta-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 45993 bases
Position: chrKV575300.1:2967266-3013258
Accession: 108417963
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000017522	RRM_1	PF00076.22	2e-06	1	1
ENSPNAP00000017516	RRM_1	PF00076.22	6e-06	1	1
ENSPNAP00000017548	RRM_1	PF00076.22	6.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000026343	-	2424	-	ENSPNAP00000017522	807 (aa)	-	-
ENSPNAT00000026379	-	2517	XM_017690078	ENSPNAP00000017548	838 (aa)	XP_017545567	UPI0008147D0F
ENSPNAT00000038568	-	2454	XM_017690079	ENSPNAP00000017516	817 (aa)	XP_017545568	UPI000814A901

Gene Model

Click here to download ENSPNAG00000023871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000023871	ppargc1b	78	43.750	ENSG00000155846	PPARGC1B	55	43.750	Homo_sapiens
ENSPNAG00000023871	ppargc1b	55	38.095	ENSAMEG00000010421	PPARGC1A	53	37.500	Ailuropoda_melanoleuca
ENSPNAG00000023871	ppargc1b	90	35.802	ENSAPLG00000009977	PPARGC1B	98	31.443	Anas_platyrhynchos
ENSPNAG00000023871	ppargc1b	52	43.411	ENSAPLG00000005303	PPARGC1A	56	41.481	Anas_platyrhynchos
ENSPNAG00000023871	ppargc1b	80	46.667	ENSACAG00000015737	PPARGC1B	85	34.545	Anolis_carolinensis
ENSPNAG00000023871	ppargc1b	52	44.961	ENSACAG00000000741	PPARGC1A	56	42.963	Anolis_carolinensis
ENSPNAG00000023871	ppargc1b	71	55.000	ENSANAG00000021830	PPARGC1B	54	55.000	Aotus_nancymaae
ENSPNAG00000023871	ppargc1b	100	85.409	ENSAMXG00000010665	ppargc1b	100	85.765	Astyanax_mexicanus
ENSPNAG00000023871	ppargc1b	91	37.611	ENSBTAG00000012943	PPARGC1B	59	43.172	Bos_taurus
ENSPNAG00000023871	ppargc1b	52	40.769	ENSBTAG00000017024	PPARGC1A	50	38.971	Bos_taurus
ENSPNAG00000023871	ppargc1b	70	55.000	ENSCJAG00000021113	PPARGC1B	51	55.000	Callithrix_jacchus
ENSPNAG00000023871	ppargc1b	53	41.045	ENSCAFG00020027242	PPARGC1A	51	40.441	Canis_lupus_dingo
ENSPNAG00000023871	ppargc1b	53	41.045	ENSCHIG00000015991	PPARGC1A	50	40.441	Capra_hircus
ENSPNAG00000023871	ppargc1b	82	43.750	ENSTSYG00000034354	PPARGC1B	52	40.404	Carlito_syrichta
ENSPNAG00000023871	ppargc1b	72	53.125	ENSCAPG00000008859	PPARGC1B	61	53.191	Cavia_aperea
ENSPNAG00000023871	ppargc1b	83	37.778	ENSCPOG00000001958	PPARGC1B	54	43.421	Cavia_porcellus
ENSPNAG00000023871	ppargc1b	71	55.000	ENSCCAG00000026909	PPARGC1B	60	55.000	Cebus_capucinus
ENSPNAG00000023871	ppargc1b	80	39.053	ENSCATG00000030402	PPARGC1B	51	55.833	Cercocebus_atys
ENSPNAG00000023871	ppargc1b	80	38.235	ENSCLAG00000015452	PPARGC1B	51	44.690	Chinchilla_lanigera
ENSPNAG00000023871	ppargc1b	78	39.053	ENSCSAG00000011792	PPARGC1B	59	40.686	Chlorocebus_sabaeus
ENSPNAG00000023871	ppargc1b	91	41.975	ENSCPBG00000007891	PPARGC1B	81	53.719	Chrysemys_picta_bellii
ENSPNAG00000023871	ppargc1b	80	38.462	ENSCANG00000037487	PPARGC1B	53	42.920	Colobus_angolensis_palliatus
ENSPNAG00000023871	ppargc1b	53	39.394	ENSDARG00000067829	ppargc1a	53	40.146	Danio_rerio
ENSPNAG00000023871	ppargc1b	92	96.296	ENSDARG00000101569	ppargc1b	100	96.296	Danio_rerio
ENSPNAG00000023871	ppargc1b	64	36.000	ENSDNOG00000005985	PPARGC1B	69	39.423	Dasypus_novemcinctus
ENSPNAG00000023871	ppargc1b	84	37.748	ENSDORG00000012605	Ppargc1b	51	53.333	Dipodomys_ordii
ENSPNAG00000023871	ppargc1b	86	44.186	ENSECAG00000019769	PPARGC1B	59	44.186	Equus_caballus
ENSPNAG00000023871	ppargc1b	52	41.538	ENSEEUG00000009219	PPARGC1A	50	40.441	Erinaceus_europaeus
ENSPNAG00000023871	ppargc1b	100	60.758	ENSELUG00000014929	ppargc1b	100	60.647	Esox_lucius
ENSPNAG00000023871	ppargc1b	89	37.576	ENSFALG00000008858	PPARGC1B	80	42.063	Ficedula_albicollis
ENSPNAG00000023871	ppargc1b	53	40.741	ENSFALG00000009211	PPARGC1A	59	40.441	Ficedula_albicollis
ENSPNAG00000023871	ppargc1b	70	44.828	ENSFDAG00000008719	PPARGC1B	59	43.966	Fukomys_damarensis
ENSPNAG00000023871	ppargc1b	55	39.744	ENSGAGG00000007043	PPARGC1A	62	38.272	Gopherus_agassizii
ENSPNAG00000023871	ppargc1b	82	55.952	ENSGAGG00000012870	PPARGC1B	84	53.333	Gopherus_agassizii
ENSPNAG00000023871	ppargc1b	66	55.172	ENSGGOG00000009505	PPARGC1B	54	43.750	Gorilla_gorilla
ENSPNAG00000023871	ppargc1b	53	41.791	ENSHGLG00000007022	PPARGC1A	50	41.176	Heterocephalus_glaber_female
ENSPNAG00000023871	ppargc1b	91	35.849	ENSHGLG00000005967	PPARGC1B	73	36.364	Heterocephalus_glaber_female
ENSPNAG00000023871	ppargc1b	75	54.098	ENSHGLG00100010588	PPARGC1B	51	54.167	Heterocephalus_glaber_male
ENSPNAG00000023871	ppargc1b	100	70.994	ENSIPUG00000001584	Ppargc1b	100	71.145	Ictalurus_punctatus
ENSPNAG00000023871	ppargc1b	77	42.969	ENSSTOG00000024758	PPARGC1B	68	42.969	Ictidomys_tridecemlineatus
ENSPNAG00000023871	ppargc1b	75	42.373	ENSJJAG00000018633	Ppargc1b	51	43.304	Jaculus_jaculus
ENSPNAG00000023871	ppargc1b	53	42.857	ENSLACG00000014054	PPARGC1A	59	41.481	Latimeria_chalumnae
ENSPNAG00000023871	ppargc1b	86	41.104	ENSLACG00000011232	PPARGC1B	73	41.104	Latimeria_chalumnae
ENSPNAG00000023871	ppargc1b	100	54.027	ENSLOCG00000012195	ppargc1b	100	53.229	Lepisosteus_oculatus
ENSPNAG00000023871	ppargc1b	54	41.935	ENSLOCG00000012350	ppargc1a	56	43.382	Lepisosteus_oculatus
ENSPNAG00000023871	ppargc1b	90	36.076	ENSLAFG00000012339	PPARGC1B	77	36.585	Loxodonta_africana
ENSPNAG00000023871	ppargc1b	80	39.053	ENSMFAG00000042269	PPARGC1B	51	55.833	Macaca_fascicularis
ENSPNAG00000023871	ppargc1b	53	41.791	ENSMMUG00000001844	PPARGC1A	51	41.176	Macaca_mulatta
ENSPNAG00000023871	ppargc1b	80	39.053	ENSMMUG00000004749	PPARGC1B	51	55.833	Macaca_mulatta
ENSPNAG00000023871	ppargc1b	80	38.462	ENSMNEG00000034121	PPARGC1B	51	55.833	Macaca_nemestrina
ENSPNAG00000023871	ppargc1b	78	39.053	ENSMLEG00000040973	PPARGC1B	58	40.686	Mandrillus_leucophaeus
ENSPNAG00000023871	ppargc1b	58	55.556	ENSMGAG00000003134	PPARGC1B	61	55.682	Meleagris_gallopavo
ENSPNAG00000023871	ppargc1b	79	41.304	ENSMAUG00000014191	Ppargc1b	68	39.024	Mesocricetus_auratus
ENSPNAG00000023871	ppargc1b	77	42.520	ENSMICG00000002702	PPARGC1B	55	42.478	Microcebus_murinus
ENSPNAG00000023871	ppargc1b	52	42.636	ENSMODG00000000549	PPARGC1A	56	40.741	Monodelphis_domestica
ENSPNAG00000023871	ppargc1b	79	41.176	ENSMODG00000009891	PPARGC1B	67	41.176	Monodelphis_domestica
ENSPNAG00000023871	ppargc1b	91	36.943	ENSNGAG00000016998	Ppargc1b	54	41.593	Nannospalax_galili
ENSPNAG00000023871	ppargc1b	67	55.172	ENSNLEG00000010193	PPARGC1B	54	50.833	Nomascus_leucogenys
ENSPNAG00000023871	ppargc1b	78	39.645	ENSOPRG00000010017	PPARGC1B	53	38.462	Ochotona_princeps
ENSPNAG00000023871	ppargc1b	80	37.931	ENSODEG00000004901	PPARGC1B	52	40.807	Octodon_degus
ENSPNAG00000023871	ppargc1b	89	34.810	ENSOANG00000009368	PPARGC1B	81	52.273	Ornithorhynchus_anatinus
ENSPNAG00000023871	ppargc1b	58	39.444	ENSOANG00000006680	PPARGC1A	60	40.123	Ornithorhynchus_anatinus
ENSPNAG00000023871	ppargc1b	73	44.531	ENSOCUG00000013833	PPARGC1B	53	44.531	Oryctolagus_cuniculus
ENSPNAG00000023871	ppargc1b	52	41.538	ENSOCUG00000014668	PPARGC1A	56	39.706	Oryctolagus_cuniculus
ENSPNAG00000023871	ppargc1b	82	44.615	ENSOARG00000005658	PPARGC1B	51	37.500	Ovis_aries
ENSPNAG00000023871	ppargc1b	76	43.750	ENSPPAG00000035226	PPARGC1B	54	42.188	Pan_paniscus
ENSPNAG00000023871	ppargc1b	78	43.750	ENSPTRG00000017403	PPARGC1B	55	43.750	Pan_troglodytes
ENSPNAG00000023871	ppargc1b	80	38.462	ENSPANG00000009512	PPARGC1B	51	55.833	Papio_anubis
ENSPNAG00000023871	ppargc1b	91	37.975	ENSPSIG00000008358	PPARGC1B	78	45.575	Pelodiscus_sinensis
ENSPNAG00000023871	ppargc1b	52	42.636	ENSPSIG00000011790	PPARGC1A	56	40.741	Pelodiscus_sinensis
ENSPNAG00000023871	ppargc1b	52	40.602	ENSPCIG00000015835	PPARGC1A	56	38.571	Phascolarctos_cinereus
ENSPNAG00000023871	ppargc1b	73	36.875	ENSPCIG00000020102	PPARGC1B	80	37.267	Phascolarctos_cinereus
ENSPNAG00000023871	ppargc1b	78	43.750	ENSPPYG00000015938	PPARGC1B	55	43.750	Pongo_abelii
ENSPNAG00000023871	ppargc1b	66	55.319	ENSPCOG00000024059	PPARGC1B	55	43.750	Propithecus_coquereli
ENSPNAG00000023871	ppargc1b	86	44.882	ENSPVAG00000001308	PPARGC1B	78	41.379	Pteropus_vampyrus
ENSPNAG00000023871	ppargc1b	80	39.053	ENSRBIG00000036724	PPARGC1B	54	55.833	Rhinopithecus_bieti
ENSPNAG00000023871	ppargc1b	78	39.053	ENSRROG00000029594	PPARGC1B	51	56.322	Rhinopithecus_roxellana
ENSPNAG00000023871	ppargc1b	54	41.045	ENSSBOG00000006423	PPARGC1A	51	40.441	Saimiri_boliviensis_boliviensis
ENSPNAG00000023871	ppargc1b	76	54.167	ENSSBOG00000028738	PPARGC1B	65	54.167	Saimiri_boliviensis_boliviensis
ENSPNAG00000023871	ppargc1b	93	36.076	ENSSHAG00000016400	PPARGC1B	86	36.478	Sarcophilus_harrisii
ENSPNAG00000023871	ppargc1b	52	41.860	ENSSHAG00000010033	PPARGC1A	54	40.000	Sarcophilus_harrisii
ENSPNAG00000023871	ppargc1b	89	61.957	ENSSFOG00015003048	ppargc1b	91	70.588	Scleropages_formosus
ENSPNAG00000023871	ppargc1b	98	33.678	ENSSPUG00000019271	PPARGC1B	90	45.596	Sphenodon_punctatus
ENSPNAG00000023871	ppargc1b	52	42.308	ENSSSCG00000029275	PPARGC1A	50	40.441	Sus_scrofa
ENSPNAG00000023871	ppargc1b	77	43.750	ENSSSCG00000014437	PPARGC1B	50	43.750	Sus_scrofa
ENSPNAG00000023871	ppargc1b	89	41.772	ENSTGUG00000000232	PPARGC1B	84	41.718	Taeniopygia_guttata
ENSPNAG00000023871	ppargc1b	52	41.860	ENSTGUG00000009487	PPARGC1A	56	40.000	Taeniopygia_guttata
ENSPNAG00000023871	ppargc1b	84	45.238	ENSTTRG00000008430	PPARGC1B	50	45.238	Tursiops_truncatus
ENSPNAG00000023871	ppargc1b	52	43.077	ENSTTRG00000005327	PPARGC1A	50	41.176	Tursiops_truncatus
ENSPNAG00000023871	ppargc1b	52	42.308	ENSUMAG00000003557	PPARGC1A	50	41.176	Ursus_maritimus
ENSPNAG00000023871	ppargc1b	75	44.348	ENSXETG00000012711	ppargc1b	80	39.669	Xenopus_tropicalis