EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000023875 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H and coiled-coil domain-containing protein 1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 7837 bases
Position: chrKV575645.1:211425-219261
Accession: 108440567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000017590	R3H	PF01424.22	6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000038605	-	1020	XM_017719492	ENSPNAP00000017590	340 (aa)	XP_017574981	-

Gene Model

Click here to download ENSPNAG00000023875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000023875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000023875	r3hcc1	66	54.545	ENSG00000104679	R3HCC1	91	53.846	Homo_sapiens
ENSPNAG00000023875	r3hcc1	97	44.103	ENSAPOG00000003616	r3hcc1	88	44.059	Acanthochromis_polyacanthus
ENSPNAG00000023875	r3hcc1	74	45.775	ENSAMEG00000002963	R3HCC1	59	45.775	Ailuropoda_melanoleuca
ENSPNAG00000023875	r3hcc1	99	40.233	ENSACIG00000017144	r3hcc1	82	54.545	Amphilophus_citrinellus
ENSPNAG00000023875	r3hcc1	98	45.250	ENSAOCG00000003945	r3hcc1	96	47.716	Amphiprion_ocellaris
ENSPNAG00000023875	r3hcc1	98	44.862	ENSAPEG00000003613	r3hcc1	96	47.208	Amphiprion_percula
ENSPNAG00000023875	r3hcc1	94	46.907	ENSATEG00000023860	r3hcc1	95	46.907	Anabas_testudineus
ENSPNAG00000023875	r3hcc1	74	48.276	ENSACAG00000016627	R3HCC1	64	48.276	Anolis_carolinensis
ENSPNAG00000023875	r3hcc1	99	34.133	ENSANAG00000036169	R3HCC1	67	43.750	Aotus_nancymaae
ENSPNAG00000023875	r3hcc1	99	32.794	ENSBTAG00000025830	R3HCC1	62	44.056	Bos_taurus
ENSPNAG00000023875	r3hcc1	75	42.657	ENSCJAG00000020118	R3HCC1	55	42.254	Callithrix_jacchus
ENSPNAG00000023875	r3hcc1	74	43.972	ENSCAFG00000009210	R3HCC1	90	34.058	Canis_familiaris
ENSPNAG00000023875	r3hcc1	59	46.429	ENSCAFG00020012870	R3HCC1	84	33.241	Canis_lupus_dingo
ENSPNAG00000023875	r3hcc1	71	45.113	ENSCHIG00000009107	R3HCC1	62	45.113	Capra_hircus
ENSPNAG00000023875	r3hcc1	99	33.816	ENSTSYG00000000511	R3HCC1	73	33.092	Carlito_syrichta
ENSPNAG00000023875	r3hcc1	61	43.307	ENSCAPG00000015813	R3HCC1	54	43.307	Cavia_aperea
ENSPNAG00000023875	r3hcc1	71	48.120	ENSCPOG00000009696	R3HCC1	59	48.120	Cavia_porcellus
ENSPNAG00000023875	r3hcc1	84	40.972	ENSCCAG00000037811	R3HCC1	67	45.312	Cebus_capucinus
ENSPNAG00000023875	r3hcc1	66	54.545	ENSCATG00000032971	R3HCC1	61	53.333	Cercocebus_atys
ENSPNAG00000023875	r3hcc1	99	35.539	ENSCLAG00000015556	R3HCC1	79	36.520	Chinchilla_lanigera
ENSPNAG00000023875	r3hcc1	75	42.361	ENSCSAG00000016250	R3HCC1	59	42.553	Chlorocebus_sabaeus
ENSPNAG00000023875	r3hcc1	99	33.173	ENSCHOG00000000396	R3HCC1	63	43.750	Choloepus_hoffmanni
ENSPNAG00000023875	r3hcc1	99	32.220	ENSCANG00000029441	R3HCC1	61	53.333	Colobus_angolensis_palliatus
ENSPNAG00000023875	r3hcc1	88	44.521	ENSCGRG00001014977	R3hcc1	60	44.521	Cricetulus_griseus_chok1gshd
ENSPNAG00000023875	r3hcc1	88	44.521	ENSCGRG00000004454	R3hcc1	60	44.521	Cricetulus_griseus_crigri
ENSPNAG00000023875	r3hcc1	98	47.368	ENSCSEG00000005748	r3hcc1	95	46.384	Cynoglossus_semilaevis
ENSPNAG00000023875	r3hcc1	85	39.884	ENSCVAG00000002640	r3hcc1	94	39.017	Cyprinodon_variegatus
ENSPNAG00000023875	r3hcc1	99	51.058	ENSDARG00000099593	r3hcc1	95	50.000	Danio_rerio
ENSPNAG00000023875	r3hcc1	99	35.194	ENSDNOG00000007168	R3HCC1	86	36.253	Dasypus_novemcinctus
ENSPNAG00000023875	r3hcc1	86	46.528	ENSDORG00000026365	R3hcc1	62	46.528	Dipodomys_ordii
ENSPNAG00000023875	r3hcc1	99	33.976	ENSEASG00005018782	R3HCC1	75	33.333	Equus_asinus_asinus
ENSPNAG00000023875	r3hcc1	99	34.058	ENSECAG00000025013	R3HCC1	63	46.528	Equus_caballus
ENSPNAG00000023875	r3hcc1	99	33.172	ENSEEUG00000011918	R3HCC1	90	32.847	Erinaceus_europaeus
ENSPNAG00000023875	r3hcc1	94	50.630	ENSELUG00000023650	r3hcc1	96	48.883	Esox_lucius
ENSPNAG00000023875	r3hcc1	99	36.927	ENSFCAG00000012395	R3HCC1	80	36.216	Felis_catus
ENSPNAG00000023875	r3hcc1	85	45.865	ENSFDAG00000001572	R3HCC1	60	45.865	Fukomys_damarensis
ENSPNAG00000023875	r3hcc1	99	40.162	ENSGMOG00000017590	-	97	40.541	Gadus_morhua
ENSPNAG00000023875	r3hcc1	99	46.985	ENSGAFG00000008747	-	88	47.342	Gambusia_affinis
ENSPNAG00000023875	r3hcc1	99	45.567	ENSGACG00000008447	r3hcc1	92	45.707	Gasterosteus_aculeatus
ENSPNAG00000023875	r3hcc1	99	30.993	ENSGGOG00000013817	R3HCC1	61	53.333	Gorilla_gorilla
ENSPNAG00000023875	r3hcc1	61	67.647	ENSHBUG00000022250	-	73	62.025	Haplochromis_burtoni
ENSPNAG00000023875	r3hcc1	99	34.236	ENSHGLG00000010517	R3HCC1	87	34.783	Heterocephalus_glaber_female
ENSPNAG00000023875	r3hcc1	99	34.236	ENSHGLG00100006388	R3HCC1	87	34.783	Heterocephalus_glaber_male
ENSPNAG00000023875	r3hcc1	99	48.421	ENSHCOG00000011745	r3hcc1	89	49.180	Hippocampus_comes
ENSPNAG00000023875	r3hcc1	99	60.695	ENSIPUG00000024504	r3hcc1	84	61.600	Ictalurus_punctatus
ENSPNAG00000023875	r3hcc1	63	56.962	ENSSTOG00000027130	R3HCC1	61	49.306	Ictidomys_tridecemlineatus
ENSPNAG00000023875	r3hcc1	74	45.070	ENSJJAG00000013075	R3hcc1	62	44.218	Jaculus_jaculus
ENSPNAG00000023875	r3hcc1	94	45.213	ENSKMAG00000000286	r3hcc1	96	45.455	Kryptolebias_marmoratus
ENSPNAG00000023875	r3hcc1	99	34.963	ENSLACG00000011894	R3HCC1	61	47.328	Latimeria_chalumnae
ENSPNAG00000023875	r3hcc1	99	49.392	ENSLOCG00000015442	r3hcc1	96	46.419	Lepisosteus_oculatus
ENSPNAG00000023875	r3hcc1	71	46.617	ENSLAFG00000016137	R3HCC1	54	46.617	Loxodonta_africana
ENSPNAG00000023875	r3hcc1	66	54.545	ENSMFAG00000032894	R3HCC1	60	53.333	Macaca_fascicularis
ENSPNAG00000023875	r3hcc1	66	54.545	ENSMMUG00000016655	R3HCC1	58	54.545	Macaca_mulatta
ENSPNAG00000023875	r3hcc1	99	32.936	ENSMNEG00000043283	R3HCC1	60	53.333	Macaca_nemestrina
ENSPNAG00000023875	r3hcc1	66	54.545	ENSMLEG00000030147	R3HCC1	61	53.333	Mandrillus_leucophaeus
ENSPNAG00000023875	r3hcc1	94	47.938	ENSMAMG00000018146	r3hcc1	96	47.194	Mastacembelus_armatus
ENSPNAG00000023875	r3hcc1	99	34.750	ENSMGAG00000001356	R3HCC1	86	34.000	Meleagris_gallopavo
ENSPNAG00000023875	r3hcc1	71	46.617	ENSMAUG00000016096	R3hcc1	61	44.898	Mesocricetus_auratus
ENSPNAG00000023875	r3hcc1	99	36.290	ENSMICG00000011146	R3HCC1	93	36.828	Microcebus_murinus
ENSPNAG00000023875	r3hcc1	76	45.324	ENSMOCG00000018508	R3hcc1	65	44.595	Microtus_ochrogaster
ENSPNAG00000023875	r3hcc1	99	30.807	ENSMODG00000016809	-	96	30.446	Monodelphis_domestica
ENSPNAG00000023875	r3hcc1	94	43.570	ENSMALG00000000731	r3hcc1	96	43.122	Monopterus_albus
ENSPNAG00000023875	r3hcc1	74	43.056	MGP_CAROLIEiJ_G0019467	R3hcc1	59	43.357	Mus_caroli
ENSPNAG00000023875	r3hcc1	74	43.056	ENSMUSG00000034194	R3hcc1	58	43.357	Mus_musculus
ENSPNAG00000023875	r3hcc1	75	43.750	MGP_PahariEiJ_G0030484	R3hcc1	58	44.056	Mus_pahari
ENSPNAG00000023875	r3hcc1	74	43.056	MGP_SPRETEiJ_G0020359	R3hcc1	58	43.357	Mus_spretus
ENSPNAG00000023875	r3hcc1	74	44.056	ENSMPUG00000003457	R3HCC1	57	44.056	Mustela_putorius_furo
ENSPNAG00000023875	r3hcc1	91	46.715	ENSNGAG00000016747	R3hcc1	63	45.578	Nannospalax_galili
ENSPNAG00000023875	r3hcc1	78	38.732	ENSNBRG00000016975	-	74	37.201	Neolamprologus_brichardi
ENSPNAG00000023875	r3hcc1	69	42.958	ENSNLEG00000015944	R3HCC1	57	42.958	Nomascus_leucogenys
ENSPNAG00000023875	r3hcc1	99	34.158	ENSMEUG00000010587	R3HCC1	93	34.568	Notamacropus_eugenii
ENSPNAG00000023875	r3hcc1	99	32.843	ENSOPRG00000013390	R3HCC1	89	33.498	Ochotona_princeps
ENSPNAG00000023875	r3hcc1	88	46.154	ENSODEG00000007529	R3HCC1	60	46.154	Octodon_degus
ENSPNAG00000023875	r3hcc1	99	32.282	ENSOANG00000013877	R3HCC1	91	33.333	Ornithorhynchus_anatinus
ENSPNAG00000023875	r3hcc1	99	34.257	ENSOCUG00000023554	R3HCC1	80	34.761	Oryctolagus_cuniculus
ENSPNAG00000023875	r3hcc1	94	42.819	ENSORLG00000016816	r3hcc1	96	43.562	Oryzias_latipes
ENSPNAG00000023875	r3hcc1	94	42.819	ENSORLG00020012005	r3hcc1	96	42.582	Oryzias_latipes_hni
ENSPNAG00000023875	r3hcc1	94	42.553	ENSORLG00015007018	r3hcc1	96	42.308	Oryzias_latipes_hsok
ENSPNAG00000023875	r3hcc1	94	41.444	ENSOMEG00000000816	r3hcc1	96	41.667	Oryzias_melastigma
ENSPNAG00000023875	r3hcc1	74	45.455	ENSOGAG00000001291	R3HCC1	60	45.455	Otolemur_garnettii
ENSPNAG00000023875	r3hcc1	99	33.092	ENSOARG00000010146	R3HCC1	63	43.357	Ovis_aries
ENSPNAG00000023875	r3hcc1	66	54.545	ENSPPAG00000033165	R3HCC1	94	32.367	Pan_paniscus
ENSPNAG00000023875	r3hcc1	75	45.139	ENSPPRG00000002522	R3HCC1	61	52.041	Panthera_pardus
ENSPNAG00000023875	r3hcc1	58	56.061	ENSPTIG00000011230	R3HCC1	53	56.061	Panthera_tigris_altaica
ENSPNAG00000023875	r3hcc1	66	54.545	ENSPTRG00000020076	R3HCC1	57	54.545	Pan_troglodytes
ENSPNAG00000023875	r3hcc1	66	54.545	ENSPANG00000000453	R3HCC1	61	53.333	Papio_anubis
ENSPNAG00000023875	r3hcc1	90	49.708	ENSPKIG00000014426	-	91	48.246	Paramormyrops_kingsleyae
ENSPNAG00000023875	r3hcc1	90	49.860	ENSPKIG00000020397	-	92	48.459	Paramormyrops_kingsleyae
ENSPNAG00000023875	r3hcc1	99	35.337	ENSPSIG00000017664	R3HCC1	93	35.109	Pelodiscus_sinensis
ENSPNAG00000023875	r3hcc1	71	53.846	ENSPMGG00000007792	r3hcc1	55	53.846	Periophthalmus_magnuspinnatus
ENSPNAG00000023875	r3hcc1	75	44.828	ENSPEMG00000007118	R3hcc1	60	44.828	Peromyscus_maniculatus_bairdii
ENSPNAG00000023875	r3hcc1	91	32.642	ENSPCIG00000022718	-	80	32.987	Phascolarctos_cinereus
ENSPNAG00000023875	r3hcc1	99	48.241	ENSPFOG00000022301	r3hcc1	88	47.089	Poecilia_formosa
ENSPNAG00000023875	r3hcc1	99	47.487	ENSPLAG00000010794	r3hcc1	88	47.089	Poecilia_latipinna
ENSPNAG00000023875	r3hcc1	99	48.241	ENSPMEG00000022515	r3hcc1	88	47.089	Poecilia_mexicana
ENSPNAG00000023875	r3hcc1	99	47.487	ENSPREG00000000713	r3hcc1	88	48.492	Poecilia_reticulata
ENSPNAG00000023875	r3hcc1	66	42.361	ENSPPYG00000018436	R3HCC1	63	42.361	Pongo_abelii
ENSPNAG00000023875	r3hcc1	74	44.361	ENSPCAG00000012229	R3HCC1	63	44.361	Procavia_capensis
ENSPNAG00000023875	r3hcc1	99	36.022	ENSPCOG00000027554	R3HCC1	93	36.290	Propithecus_coquereli
ENSPNAG00000023875	r3hcc1	99	36.165	ENSPVAG00000009829	R3HCC1	90	36.650	Pteropus_vampyrus
ENSPNAG00000023875	r3hcc1	66	54.545	ENSRBIG00000028045	R3HCC1	61	53.333	Rhinopithecus_bieti
ENSPNAG00000023875	r3hcc1	66	54.545	ENSRROG00000031126	R3HCC1	61	53.333	Rhinopithecus_roxellana
ENSPNAG00000023875	r3hcc1	99	34.933	ENSSBOG00000022590	R3HCC1	93	34.667	Saimiri_boliviensis_boliviensis
ENSPNAG00000023875	r3hcc1	66	51.515	ENSSHAG00000016526	-	53	51.515	Sarcophilus_harrisii
ENSPNAG00000023875	r3hcc1	93	53.151	ENSSFOG00015013507	r3hcc1	95	51.639	Scleropages_formosus
ENSPNAG00000023875	r3hcc1	94	48.346	ENSSMAG00000008647	r3hcc1	96	46.154	Scophthalmus_maximus
ENSPNAG00000023875	r3hcc1	99	48.662	ENSSDUG00000022786	r3hcc1	95	48.529	Seriola_dumerili
ENSPNAG00000023875	r3hcc1	99	48.418	ENSSLDG00000019031	r3hcc1	95	48.529	Seriola_lalandi_dorsalis
ENSPNAG00000023875	r3hcc1	98	48.232	ENSSPAG00000013497	r3hcc1	96	47.328	Stegastes_partitus
ENSPNAG00000023875	r3hcc1	75	44.444	ENSSSCG00000039915	-	60	44.444	Sus_scrofa
ENSPNAG00000023875	r3hcc1	69	43.089	ENSSSCG00000037347	-	54	43.089	Sus_scrofa
ENSPNAG00000023875	r3hcc1	98	43.514	ENSTRUG00000015880	r3hcc1	94	42.896	Takifugu_rubripes
ENSPNAG00000023875	r3hcc1	74	45.070	ENSTTRG00000012247	R3HCC1	90	32.767	Tursiops_truncatus
ENSPNAG00000023875	r3hcc1	74	45.070	ENSUAMG00000007344	R3HCC1	65	45.070	Ursus_americanus
ENSPNAG00000023875	r3hcc1	76	44.681	ENSVVUG00000005056	R3HCC1	90	33.735	Vulpes_vulpes
ENSPNAG00000023875	r3hcc1	96	42.781	ENSXCOG00000017626	r3hcc1	86	42.781	Xiphophorus_couchianus
ENSPNAG00000023875	r3hcc1	99	46.835	ENSXMAG00000018375	r3hcc1	88	46.835	Xiphophorus_maculatus