EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000024136 (Gene tree)
Gene ID: 108432213
Gene Symbol: smarca4a
Alias: brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 15510 bases
Position: chrKV575400.1:1178516-1194025
Accession: 108432213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000017742	ResIII	PF04851.15	9.5e-09	1	1
ENSPNAP00000017742	BRK	PF07533.16	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000026648	-	4608	XM_017705906	ENSPNAP00000017742	1535 (aa)	XP_017561395	-

Gene Model

Click here to download ENSPNAG00000024136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000024136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000024136	smarca4a	98	74.173	ENSPNAG00000014635	smarca2	94	74.851
ENSPNAG00000024136	smarca4a	94	84.323	ENSPNAG00000006636	-	92	91.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000024136	smarca4a	98	88.024	ENSG00000127616	SMARCA4	94	97.260	Homo_sapiens
ENSPNAG00000024136	smarca4a	94	81.125	ENSAPOG00000004542	SMARCA4	99	85.897	Acanthochromis_polyacanthus
ENSPNAG00000024136	smarca4a	77	88.313	ENSAPOG00000003509	smarca4a	96	86.797	Acanthochromis_polyacanthus
ENSPNAG00000024136	smarca4a	97	85.147	ENSAMEG00000010868	SMARCA4	93	85.874	Ailuropoda_melanoleuca
ENSPNAG00000024136	smarca4a	97	87.152	ENSACIG00000021550	smarca4a	97	85.272	Amphilophus_citrinellus
ENSPNAG00000024136	smarca4a	94	86.107	ENSACIG00000003035	-	97	86.452	Amphilophus_citrinellus
ENSPNAG00000024136	smarca4a	89	88.762	ENSAOCG00000019167	smarca4a	100	89.152	Amphiprion_ocellaris
ENSPNAG00000024136	smarca4a	89	88.635	ENSAPEG00000015559	smarca4a	100	89.024	Amphiprion_percula
ENSPNAG00000024136	smarca4a	98	84.546	ENSAPEG00000023108	-	97	85.072	Amphiprion_percula
ENSPNAG00000024136	smarca4a	98	84.292	ENSATEG00000001094	-	97	86.703	Anabas_testudineus
ENSPNAG00000024136	smarca4a	97	88.058	ENSATEG00000011524	smarca4a	97	87.533	Anabas_testudineus
ENSPNAG00000024136	smarca4a	98	85.829	ENSANAG00000036991	SMARCA4	93	86.770	Aotus_nancymaae
ENSPNAG00000024136	smarca4a	97	86.378	ENSACLG00000000163	smarca4a	97	84.743	Astatotilapia_calliptera
ENSPNAG00000024136	smarca4a	94	86.590	ENSACLG00000008638	-	98	86.532	Astatotilapia_calliptera
ENSPNAG00000024136	smarca4a	97	91.803	ENSAMXG00000021023	smarca4a	99	92.227	Astyanax_mexicanus
ENSPNAG00000024136	smarca4a	93	84.369	ENSAMXG00000011238	-	99	85.714	Astyanax_mexicanus
ENSPNAG00000024136	smarca4a	81	90.767	ENSBTAG00000019220	SMARCA4	97	84.488	Bos_taurus
ENSPNAG00000024136	smarca4a	98	85.829	ENSCJAG00000005936	SMARCA4	93	85.736	Callithrix_jacchus
ENSPNAG00000024136	smarca4a	97	87.344	ENSCAFG00020024620	SMARCA4	97	86.911	Canis_lupus_dingo
ENSPNAG00000024136	smarca4a	81	85.781	ENSCHIG00000015318	SMARCA4	97	80.571	Capra_hircus
ENSPNAG00000024136	smarca4a	81	90.376	ENSTSYG00000012966	SMARCA4	93	89.612	Carlito_syrichta
ENSPNAG00000024136	smarca4a	93	85.784	ENSCAPG00000015932	SMARCA4	99	84.972	Cavia_aperea
ENSPNAG00000024136	smarca4a	96	84.483	ENSCCAG00000031660	SMARCA4	92	86.739	Cebus_capucinus
ENSPNAG00000024136	smarca4a	98	88.024	ENSCATG00000029530	SMARCA4	93	90.738	Cercocebus_atys
ENSPNAG00000024136	smarca4a	97	86.280	ENSCLAG00000011946	SMARCA4	97	85.641	Chinchilla_lanigera
ENSPNAG00000024136	smarca4a	96	87.870	ENSCANG00000036013	SMARCA4	93	90.738	Colobus_angolensis_palliatus
ENSPNAG00000024136	smarca4a	96	87.950	ENSCGRG00000017242	Smarca4	93	90.738	Cricetulus_griseus_crigri
ENSPNAG00000024136	smarca4a	97	85.381	ENSCVAG00000006979	smarca4a	98	83.700	Cyprinodon_variegatus
ENSPNAG00000024136	smarca4a	91	81.733	ENSDARG00000104339	SMARCA4	79	89.580	Danio_rerio
ENSPNAG00000024136	smarca4a	98	87.259	ENSDARG00000077226	smarca4a	99	85.705	Danio_rerio
ENSPNAG00000024136	smarca4a	97	83.225	ENSDNOG00000048847	SMARCA4	90	89.468	Dasypus_novemcinctus
ENSPNAG00000024136	smarca4a	85	86.162	ENSDORG00000002544	Smarca4	85	87.429	Dipodomys_ordii
ENSPNAG00000024136	smarca4a	92	84.052	ENSETEG00000013361	SMARCA4	94	73.062	Echinops_telfairi
ENSPNAG00000024136	smarca4a	98	87.565	ENSEASG00005006167	SMARCA4	96	87.997	Equus_asinus_asinus
ENSPNAG00000024136	smarca4a	98	87.836	ENSELUG00000010247	smarca4a	98	87.516	Esox_lucius
ENSPNAG00000024136	smarca4a	75	90.901	ENSFALG00000004208	SMARCA4	93	81.727	Ficedula_albicollis
ENSPNAG00000024136	smarca4a	98	82.538	ENSFHEG00000007902	-	97	80.120	Fundulus_heteroclitus
ENSPNAG00000024136	smarca4a	97	84.332	ENSFHEG00000010182	smarca4a	99	85.450	Fundulus_heteroclitus
ENSPNAG00000024136	smarca4a	80	88.136	ENSGMOG00000002649	smarca4a	86	83.274	Gadus_morhua
ENSPNAG00000024136	smarca4a	85	79.260	ENSGMOG00000005756	-	84	79.229	Gadus_morhua
ENSPNAG00000024136	smarca4a	87	86.595	ENSGAFG00000014900	smarca4a	97	86.454	Gambusia_affinis
ENSPNAG00000024136	smarca4a	98	83.002	ENSGAFG00000008827	-	97	82.944	Gambusia_affinis
ENSPNAG00000024136	smarca4a	98	77.396	ENSGACG00000016033	-	97	75.890	Gasterosteus_aculeatus
ENSPNAG00000024136	smarca4a	94	84.224	ENSGACG00000006691	smarca4a	98	82.235	Gasterosteus_aculeatus
ENSPNAG00000024136	smarca4a	98	88.024	ENSGGOG00000009882	SMARCA4	93	90.738	Gorilla_gorilla
ENSPNAG00000024136	smarca4a	94	86.001	ENSHBUG00000005447	-	98	86.145	Haplochromis_burtoni
ENSPNAG00000024136	smarca4a	97	86.497	ENSHBUG00000021172	smarca4a	98	84.635	Haplochromis_burtoni
ENSPNAG00000024136	smarca4a	97	83.891	ENSHGLG00000010519	SMARCA4	92	90.446	Heterocephalus_glaber_female
ENSPNAG00000024136	smarca4a	98	85.723	ENSHGLG00100013774	SMARCA4	93	91.146	Heterocephalus_glaber_male
ENSPNAG00000024136	smarca4a	94	85.770	ENSHCOG00000009510	smarca4a	96	85.659	Hippocampus_comes
ENSPNAG00000024136	smarca4a	94	92.334	ENSIPUG00000006107	smarca4a	97	92.209	Ictalurus_punctatus
ENSPNAG00000024136	smarca4a	96	83.312	ENSIPUG00000016346	-	81	89.961	Ictalurus_punctatus
ENSPNAG00000024136	smarca4a	97	86.410	ENSKMAG00000011931	smarca4a	97	84.817	Kryptolebias_marmoratus
ENSPNAG00000024136	smarca4a	96	85.000	ENSLBEG00000020655	-	99	84.820	Labrus_bergylta
ENSPNAG00000024136	smarca4a	94	84.535	ENSLBEG00000017383	smarca4a	77	88.714	Labrus_bergylta
ENSPNAG00000024136	smarca4a	50	77.738	ENSLACG00000015309	SMARCA4	100	74.460	Latimeria_chalumnae
ENSPNAG00000024136	smarca4a	97	84.260	ENSLOCG00000007820	smarca4a	90	90.701	Lepisosteus_oculatus
ENSPNAG00000024136	smarca4a	97	85.678	ENSLAFG00000001433	SMARCA4	93	90.603	Loxodonta_africana
ENSPNAG00000024136	smarca4a	98	88.024	ENSMFAG00000032146	SMARCA4	92	90.738	Macaca_fascicularis
ENSPNAG00000024136	smarca4a	98	88.024	ENSMMUG00000012042	SMARCA4	95	92.121	Macaca_mulatta
ENSPNAG00000024136	smarca4a	98	88.024	ENSMNEG00000028512	SMARCA4	93	90.738	Macaca_nemestrina
ENSPNAG00000024136	smarca4a	97	85.085	ENSMLEG00000034976	SMARCA4	93	90.525	Mandrillus_leucophaeus
ENSPNAG00000024136	smarca4a	98	80.774	ENSMAMG00000002841	-	97	80.322	Mastacembelus_armatus
ENSPNAG00000024136	smarca4a	97	86.696	ENSMAMG00000009256	smarca4a	98	84.814	Mastacembelus_armatus
ENSPNAG00000024136	smarca4a	97	86.442	ENSMZEG00005003889	smarca4a	98	84.581	Maylandia_zebra
ENSPNAG00000024136	smarca4a	94	81.634	ENSMZEG00005023861	-	93	90.592	Maylandia_zebra
ENSPNAG00000024136	smarca4a	96	86.804	ENSMICG00000009806	SMARCA4	93	90.525	Microcebus_murinus
ENSPNAG00000024136	smarca4a	94	85.462	ENSMMOG00000007571	smarca4a	98	83.976	Mola_mola
ENSPNAG00000024136	smarca4a	99	85.668	ENSMMOG00000008466	-	97	85.564	Mola_mola
ENSPNAG00000024136	smarca4a	82	88.395	ENSMODG00000006287	SMARCA4	93	88.037	Monodelphis_domestica
ENSPNAG00000024136	smarca4a	89	85.222	ENSMALG00000021534	-	99	85.714	Monopterus_albus
ENSPNAG00000024136	smarca4a	93	86.139	ENSMALG00000003388	smarca4a	98	83.879	Monopterus_albus
ENSPNAG00000024136	smarca4a	72	87.489	MGP_CAROLIEiJ_G0031879	Smarca4	93	90.809	Mus_caroli
ENSPNAG00000024136	smarca4a	72	87.489	ENSMUSG00000032187	Smarca4	93	90.809	Mus_musculus
ENSPNAG00000024136	smarca4a	81	90.760	MGP_PahariEiJ_G0014745	Smarca4	92	86.844	Mus_pahari
ENSPNAG00000024136	smarca4a	72	87.489	MGP_SPRETEiJ_G0033003	Smarca4	93	90.809	Mus_spretus
ENSPNAG00000024136	smarca4a	89	85.877	ENSNBRG00000018865	-	99	86.010	Neolamprologus_brichardi
ENSPNAG00000024136	smarca4a	94	89.428	ENSNBRG00000011457	smarca4a	96	89.630	Neolamprologus_brichardi
ENSPNAG00000024136	smarca4a	92	86.629	ENSNLEG00000012389	SMARCA4	89	87.105	Nomascus_leucogenys
ENSPNAG00000024136	smarca4a	82	93.103	ENSOPRG00000000885	-	77	93.103	Ochotona_princeps
ENSPNAG00000024136	smarca4a	97	86.718	ENSODEG00000017127	SMARCA4	97	85.632	Octodon_degus
ENSPNAG00000024136	smarca4a	97	86.469	ENSONIG00000008196	smarca4a	98	84.908	Oreochromis_niloticus
ENSPNAG00000024136	smarca4a	98	81.463	ENSONIG00000018040	-	93	90.487	Oreochromis_niloticus
ENSPNAG00000024136	smarca4a	97	80.357	ENSOCUG00000001787	SMARCA4	98	80.166	Oryctolagus_cuniculus
ENSPNAG00000024136	smarca4a	93	85.331	ENSORLG00000015452	smarca4a	98	84.635	Oryzias_latipes
ENSPNAG00000024136	smarca4a	94	81.025	ENSORLG00000003955	-	93	89.709	Oryzias_latipes
ENSPNAG00000024136	smarca4a	94	80.973	ENSORLG00020009728	-	93	89.639	Oryzias_latipes_hni
ENSPNAG00000024136	smarca4a	93	85.219	ENSORLG00020004611	smarca4a	99	86.383	Oryzias_latipes_hni
ENSPNAG00000024136	smarca4a	98	80.781	ENSORLG00015007739	-	93	89.843	Oryzias_latipes_hsok
ENSPNAG00000024136	smarca4a	97	85.066	ENSORLG00015016560	smarca4a	98	84.320	Oryzias_latipes_hsok
ENSPNAG00000024136	smarca4a	98	80.522	ENSOMEG00000016626	-	97	80.067	Oryzias_melastigma
ENSPNAG00000024136	smarca4a	98	85.090	ENSOMEG00000007486	smarca4a	98	83.985	Oryzias_melastigma
ENSPNAG00000024136	smarca4a	88	84.483	ENSOGAG00000016148	SMARCA4	94	88.539	Otolemur_garnettii
ENSPNAG00000024136	smarca4a	82	89.900	ENSOARG00000017454	SMARCA4	98	84.214	Ovis_aries
ENSPNAG00000024136	smarca4a	98	88.024	ENSPPAG00000043191	SMARCA4	93	90.738	Pan_paniscus
ENSPNAG00000024136	smarca4a	98	88.024	ENSPTRG00000010488	SMARCA4	93	90.738	Pan_troglodytes
ENSPNAG00000024136	smarca4a	98	85.902	ENSPANG00000011042	SMARCA4	92	90.738	Papio_anubis
ENSPNAG00000024136	smarca4a	97	89.564	ENSPKIG00000007770	SMARCA4	96	88.904	Paramormyrops_kingsleyae
ENSPNAG00000024136	smarca4a	98	81.999	ENSPSIG00000005547	SMARCA4	98	80.812	Pelodiscus_sinensis
ENSPNAG00000024136	smarca4a	82	90.579	ENSPCIG00000017138	SMARCA4	93	90.959	Phascolarctos_cinereus
ENSPNAG00000024136	smarca4a	98	86.541	ENSPLAG00000014294	smarca4a	97	87.237	Poecilia_latipinna
ENSPNAG00000024136	smarca4a	98	84.056	ENSPMEG00000008929	-	97	84.551	Poecilia_mexicana
ENSPNAG00000024136	smarca4a	97	83.172	ENSPMEG00000003725	smarca4a	97	83.474	Poecilia_mexicana
ENSPNAG00000024136	smarca4a	98	84.399	ENSPREG00000014823	-	97	85.195	Poecilia_reticulata
ENSPNAG00000024136	smarca4a	97	82.719	ENSPREG00000014608	smarca4a	97	83.217	Poecilia_reticulata
ENSPNAG00000024136	smarca4a	77	93.130	ENSPCAG00000014054	SMARCA4	71	93.130	Procavia_capensis
ENSPNAG00000024136	smarca4a	98	85.831	ENSPCOG00000023011	SMARCA4	93	90.525	Propithecus_coquereli
ENSPNAG00000024136	smarca4a	76	84.052	ENSPVAG00000007787	SMARCA4	88	96.121	Pteropus_vampyrus
ENSPNAG00000024136	smarca4a	97	88.757	ENSPNYG00000000717	smarca4a	94	89.335	Pundamilia_nyererei
ENSPNAG00000024136	smarca4a	94	85.724	ENSPNYG00000023995	-	98	86.135	Pundamilia_nyererei
ENSPNAG00000024136	smarca4a	98	87.949	ENSRBIG00000038696	SMARCA4	92	90.738	Rhinopithecus_bieti
ENSPNAG00000024136	smarca4a	98	87.949	ENSRROG00000045509	SMARCA4	93	90.738	Rhinopithecus_roxellana
ENSPNAG00000024136	smarca4a	96	87.538	ENSSBOG00000026896	SMARCA4	93	90.738	Saimiri_boliviensis_boliviensis
ENSPNAG00000024136	smarca4a	82	90.502	ENSSHAG00000001642	SMARCA4	93	90.881	Sarcophilus_harrisii
ENSPNAG00000024136	smarca4a	95	81.660	ENSSFOG00015009921	-	89	90.461	Scleropages_formosus
ENSPNAG00000024136	smarca4a	97	90.241	ENSSFOG00015013823	smarca4	95	90.111	Scleropages_formosus
ENSPNAG00000024136	smarca4a	97	85.341	ENSSMAG00000003200	smarca4a	98	82.793	Scophthalmus_maximus
ENSPNAG00000024136	smarca4a	97	82.413	ENSSDUG00000017298	smarca4a	97	80.696	Seriola_dumerili
ENSPNAG00000024136	smarca4a	99	83.211	ENSSDUG00000005388	-	98	80.690	Seriola_dumerili
ENSPNAG00000024136	smarca4a	97	85.821	ENSSLDG00000024486	smarca4a	100	88.127	Seriola_lalandi_dorsalis
ENSPNAG00000024136	smarca4a	64	97.516	ENSSARG00000013477	SMARCA4	81	97.516	Sorex_araneus
ENSPNAG00000024136	smarca4a	97	89.143	ENSSPAG00000004248	smarca4a	97	88.998	Stegastes_partitus
ENSPNAG00000024136	smarca4a	98	83.184	ENSSPAG00000012533	-	93	89.449	Stegastes_partitus
ENSPNAG00000024136	smarca4a	54	83.037	ENSTGUG00000015488	-	98	82.775	Taeniopygia_guttata
ENSPNAG00000024136	smarca4a	89	84.719	ENSTRUG00000004885	smarca4a	100	85.125	Takifugu_rubripes
ENSPNAG00000024136	smarca4a	95	87.131	ENSUMAG00000022005	SMARCA4	95	90.816	Ursus_maritimus
ENSPNAG00000024136	smarca4a	97	81.371	ENSXETG00000009355	smarca4	99	78.474	Xenopus_tropicalis
ENSPNAG00000024136	smarca4a	98	86.894	ENSXCOG00000013494	-	97	87.708	Xiphophorus_couchianus
ENSPNAG00000024136	smarca4a	98	85.080	ENSXMAG00000007030	-	97	85.463	Xiphophorus_maculatus
ENSPNAG00000024136	smarca4a	97	83.114	ENSXMAG00000006321	smarca4a	100	86.229	Xiphophorus_maculatus