EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000024141 (Gene tree)
Gene ID: 108424897
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 98000 bases
Position: chrKV575312.1:2898575-2996574
Accession: 108424897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000017481	ResIII	PF04851.15	1.9e-06	1	1
ENSPNAP00000034517	ResIII	PF04851.15	2e-06	1	1
ENSPNAP00000017486	ResIII	PF04851.15	2.3e-06	1	1
ENSPNAP00000017539	ResIII	PF04851.15	1.1e-05	1	1
ENSPNAP00000017481	BRK	PF07533.16	7e-33	1	2
ENSPNAP00000017481	BRK	PF07533.16	7e-33	2	2
ENSPNAP00000034517	BRK	PF07533.16	7.2e-33	1	2
ENSPNAP00000034517	BRK	PF07533.16	7.2e-33	2	2
ENSPNAP00000017486	BRK	PF07533.16	9.4e-33	1	2
ENSPNAP00000017486	BRK	PF07533.16	9.4e-33	2	2
ENSPNAP00000017539	BRK	PF07533.16	1.1e-32	1	2
ENSPNAP00000017539	BRK	PF07533.16	1.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000038550	-	11772	-	ENSPNAP00000017481	2422 (aa)	-	-
ENSPNAT00000038577	-	14027	XM_017693199	ENSPNAP00000017539	2953 (aa)	XP_017548688	UPI0008149320
ENSPNAT00000026258	-	11694	XM_017693204	ENSPNAP00000034517	2450 (aa)	XP_017548693	UPI00081482A6
ENSPNAT00000026305	-	8442	-	ENSPNAP00000017486	2813 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000024141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000024141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000024141	chd9	84	68.945	ENSPNAG00000011245	chd7	90	66.957
ENSPNAG00000024141	chd9	80	66.619	ENSPNAG00000012825	chd6	70	66.331
ENSPNAG00000024141	chd9	71	60.826	ENSPNAG00000003683	chd8	69	61.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000024141	chd9	99	69.096	ENSG00000177200	CHD9	91	77.670	Homo_sapiens
ENSPNAG00000024141	chd9	99	78.702	ENSAPOG00000023034	chd9	99	78.566	Acanthochromis_polyacanthus
ENSPNAG00000024141	chd9	68	75.583	ENSAMEG00000016232	CHD9	86	68.111	Ailuropoda_melanoleuca
ENSPNAG00000024141	chd9	98	74.919	ENSACIG00000004097	chd9	98	69.564	Amphilophus_citrinellus
ENSPNAG00000024141	chd9	99	78.486	ENSAOCG00000005487	chd9	99	78.549	Amphiprion_ocellaris
ENSPNAG00000024141	chd9	99	78.606	ENSAPEG00000009859	chd9	99	78.628	Amphiprion_percula
ENSPNAG00000024141	chd9	99	78.337	ENSATEG00000002748	chd9	99	70.530	Anabas_testudineus
ENSPNAG00000024141	chd9	99	70.672	ENSAPLG00000002826	CHD9	74	65.638	Anas_platyrhynchos
ENSPNAG00000024141	chd9	68	75.569	ENSACAG00000016150	CHD9	80	70.364	Anolis_carolinensis
ENSPNAG00000024141	chd9	68	74.865	ENSANAG00000015630	CHD9	92	70.909	Aotus_nancymaae
ENSPNAG00000024141	chd9	98	75.882	ENSACLG00000016899	chd9	99	69.400	Astatotilapia_calliptera
ENSPNAG00000024141	chd9	98	91.284	ENSAMXG00000005652	chd9	98	91.368	Astyanax_mexicanus
ENSPNAG00000024141	chd9	68	75.404	ENSBTAG00000002287	CHD9	90	66.938	Bos_taurus
ENSPNAG00000024141	chd9	99	68.944	ENSCJAG00000001573	CHD9	92	71.273	Callithrix_jacchus
ENSPNAG00000024141	chd9	68	75.583	ENSCAFG00000009699	CHD9	86	67.967	Canis_familiaris
ENSPNAG00000024141	chd9	68	75.583	ENSCAFG00020002879	CHD9	93	71.636	Canis_lupus_dingo
ENSPNAG00000024141	chd9	99	58.721	ENSCHIG00000021000	CHD9	63	71.007	Capra_hircus
ENSPNAG00000024141	chd9	68	75.060	ENSTSYG00000007693	CHD9	98	70.909	Carlito_syrichta
ENSPNAG00000024141	chd9	79	59.524	ENSCAPG00000011604	CHD9	69	59.864	Cavia_aperea
ENSPNAG00000024141	chd9	68	70.280	ENSCPOG00000036544	CHD9	85	63.399	Cavia_porcellus
ENSPNAG00000024141	chd9	68	74.940	ENSCCAG00000036178	CHD9	92	71.377	Cebus_capucinus
ENSPNAG00000024141	chd9	68	75.135	ENSCATG00000036753	CHD9	92	71.273	Cercocebus_atys
ENSPNAG00000024141	chd9	68	74.689	ENSCLAG00000007137	CHD9	99	77.865	Chinchilla_lanigera
ENSPNAG00000024141	chd9	68	75.075	ENSCSAG00000005311	CHD9	86	66.447	Chlorocebus_sabaeus
ENSPNAG00000024141	chd9	71	91.146	ENSCHOG00000003935	CHD9	61	91.099	Choloepus_hoffmanni
ENSPNAG00000024141	chd9	93	84.198	ENSCPBG00000012459	CHD9	90	80.666	Chrysemys_picta_bellii
ENSPNAG00000024141	chd9	68	75.075	ENSCANG00000030349	CHD9	92	71.273	Colobus_angolensis_palliatus
ENSPNAG00000024141	chd9	99	68.913	ENSCGRG00001016150	Chd9	90	66.304	Cricetulus_griseus_chok1gshd
ENSPNAG00000024141	chd9	99	68.913	ENSCGRG00000012850	Chd9	99	78.041	Cricetulus_griseus_crigri
ENSPNAG00000024141	chd9	99	75.771	ENSCSEG00000009209	chd9	99	75.000	Cynoglossus_semilaevis
ENSPNAG00000024141	chd9	96	78.326	ENSCVAG00000016195	chd9	98	68.560	Cyprinodon_variegatus
ENSPNAG00000024141	chd9	99	82.478	ENSDARG00000074498	chd9	99	83.245	Danio_rerio
ENSPNAG00000024141	chd9	66	76.211	ENSDNOG00000006045	CHD9	98	70.848	Dasypus_novemcinctus
ENSPNAG00000024141	chd9	83	68.845	ENSDORG00000008523	-	96	71.325	Dipodomys_ordii
ENSPNAG00000024141	chd9	65	92.063	ENSETEG00000009565	CHD9	82	91.935	Echinops_telfairi
ENSPNAG00000024141	chd9	87	79.656	ENSEASG00005014832	CHD9	96	79.785	Equus_asinus_asinus
ENSPNAG00000024141	chd9	68	75.642	ENSECAG00000011505	CHD9	86	68.006	Equus_caballus
ENSPNAG00000024141	chd9	84	80.663	ENSEEUG00000014515	CHD9	71	80.663	Erinaceus_europaeus
ENSPNAG00000024141	chd9	87	78.803	ENSELUG00000006031	chd9	97	79.125	Esox_lucius
ENSPNAG00000024141	chd9	68	75.703	ENSFCAG00000022534	CHD9	92	72.000	Felis_catus
ENSPNAG00000024141	chd9	99	70.077	ENSFALG00000013276	CHD9	95	72.947	Ficedula_albicollis
ENSPNAG00000024141	chd9	68	74.434	ENSFDAG00000021037	CHD9	91	66.100	Fukomys_damarensis
ENSPNAG00000024141	chd9	97	78.204	ENSFHEG00000006068	chd9	96	78.114	Fundulus_heteroclitus
ENSPNAG00000024141	chd9	81	84.335	ENSGMOG00000006040	chd9	84	84.257	Gadus_morhua
ENSPNAG00000024141	chd9	95	71.986	ENSGALG00000039178	CHD9	88	68.743	Gallus_gallus
ENSPNAG00000024141	chd9	97	77.664	ENSGAFG00000010014	chd9	99	76.510	Gambusia_affinis
ENSPNAG00000024141	chd9	68	75.015	ENSGGOG00000014816	CHD9	92	71.273	Gorilla_gorilla
ENSPNAG00000024141	chd9	99	76.562	ENSHBUG00000023322	chd9	98	81.404	Haplochromis_burtoni
ENSPNAG00000024141	chd9	99	68.119	ENSHGLG00000014938	CHD9	99	77.753	Heterocephalus_glaber_female
ENSPNAG00000024141	chd9	97	75.917	ENSHCOG00000000937	chd9	98	75.617	Hippocampus_comes
ENSPNAG00000024141	chd9	99	85.773	ENSIPUG00000016448	chd9	97	87.454	Ictalurus_punctatus
ENSPNAG00000024141	chd9	68	75.105	ENSSTOG00000022273	CHD9	99	78.202	Ictidomys_tridecemlineatus
ENSPNAG00000024141	chd9	52	77.344	ENSJJAG00000015741	-	97	71.494	Jaculus_jaculus
ENSPNAG00000024141	chd9	97	78.273	ENSKMAG00000016784	chd9	97	78.008	Kryptolebias_marmoratus
ENSPNAG00000024141	chd9	97	78.330	ENSLBEG00000012077	chd9	99	77.350	Labrus_bergylta
ENSPNAG00000024141	chd9	96	67.097	ENSLACG00000005557	CHD9	85	64.919	Latimeria_chalumnae
ENSPNAG00000024141	chd9	99	75.800	ENSLOCG00000007225	chd9	99	75.432	Lepisosteus_oculatus
ENSPNAG00000024141	chd9	68	74.836	ENSLAFG00000015374	CHD9	86	67.555	Loxodonta_africana
ENSPNAG00000024141	chd9	95	70.059	ENSMFAG00000041354	CHD9	94	71.755	Macaca_fascicularis
ENSPNAG00000024141	chd9	68	75.315	ENSMMUG00000016310	CHD9	92	71.273	Macaca_mulatta
ENSPNAG00000024141	chd9	68	75.315	ENSMNEG00000031494	CHD9	87	69.227	Macaca_nemestrina
ENSPNAG00000024141	chd9	68	75.135	ENSMLEG00000043219	CHD9	92	71.273	Mandrillus_leucophaeus
ENSPNAG00000024141	chd9	97	79.131	ENSMAMG00000003909	chd9	99	70.095	Mastacembelus_armatus
ENSPNAG00000024141	chd9	99	77.514	ENSMZEG00005006581	chd9	99	77.892	Maylandia_zebra
ENSPNAG00000024141	chd9	99	65.725	ENSMGAG00000004642	CHD9	66	67.299	Meleagris_gallopavo
ENSPNAG00000024141	chd9	68	75.105	ENSMICG00000016679	CHD9	92	72.000	Microcebus_murinus
ENSPNAG00000024141	chd9	98	76.543	ENSMMOG00000016406	chd9	99	68.808	Mola_mola
ENSPNAG00000024141	chd9	89	64.383	ENSMODG00000013142	-	96	79.580	Monodelphis_domestica
ENSPNAG00000024141	chd9	96	78.103	ENSMALG00000013306	chd9	97	71.738	Monopterus_albus
ENSPNAG00000024141	chd9	99	68.702	MGP_CAROLIEiJ_G0031364	Chd9	80	71.589	Mus_caroli
ENSPNAG00000024141	chd9	99	68.883	ENSMUSG00000056608	Chd9	99	77.928	Mus_musculus
ENSPNAG00000024141	chd9	99	67.358	MGP_PahariEiJ_G0022964	Chd9	87	64.611	Mus_pahari
ENSPNAG00000024141	chd9	99	60.284	MGP_SPRETEiJ_G0032483	Chd9	80	71.361	Mus_spretus
ENSPNAG00000024141	chd9	68	75.703	ENSMPUG00000003285	CHD9	88	66.023	Mustela_putorius_furo
ENSPNAG00000024141	chd9	68	75.404	ENSMLUG00000004456	CHD9	86	67.555	Myotis_lucifugus
ENSPNAG00000024141	chd9	99	77.149	ENSNBRG00000009423	chd9	99	77.201	Neolamprologus_brichardi
ENSPNAG00000024141	chd9	90	63.332	ENSNLEG00000001026	CHD9	100	62.663	Nomascus_leucogenys
ENSPNAG00000024141	chd9	74	96.241	ENSMEUG00000008222	-	74	92.857	Notamacropus_eugenii
ENSPNAG00000024141	chd9	56	96.241	ENSOPRG00000011168	CHD9	71	88.319	Ochotona_princeps
ENSPNAG00000024141	chd9	97	61.165	ENSODEG00000004466	CHD9	84	70.521	Octodon_degus
ENSPNAG00000024141	chd9	98	77.566	ENSONIG00000002816	chd9	98	78.785	Oreochromis_niloticus
ENSPNAG00000024141	chd9	68	76.299	ENSOANG00000013401	CHD9	85	69.753	Ornithorhynchus_anatinus
ENSPNAG00000024141	chd9	99	69.096	ENSOCUG00000001016	CHD9	94	71.749	Oryctolagus_cuniculus
ENSPNAG00000024141	chd9	97	77.293	ENSORLG00000013810	chd9	96	76.933	Oryzias_latipes
ENSPNAG00000024141	chd9	97	76.275	ENSORLG00020020665	chd9	97	69.168	Oryzias_latipes_hni
ENSPNAG00000024141	chd9	97	77.345	ENSORLG00015019126	chd9	96	77.620	Oryzias_latipes_hsok
ENSPNAG00000024141	chd9	56	83.962	ENSOMEG00000015978	chd9	99	69.523	Oryzias_melastigma
ENSPNAG00000024141	chd9	99	69.043	ENSOGAG00000002110	CHD9	86	67.678	Otolemur_garnettii
ENSPNAG00000024141	chd9	68	75.209	ENSOARG00000017664	CHD9	86	67.963	Ovis_aries
ENSPNAG00000024141	chd9	83	69.366	ENSPPAG00000039388	-	96	71.096	Pan_paniscus
ENSPNAG00000024141	chd9	68	75.718	ENSPPRG00000004801	CHD9	92	72.101	Panthera_pardus
ENSPNAG00000024141	chd9	68	73.968	ENSPTIG00000021854	CHD9	90	65.725	Panthera_tigris_altaica
ENSPNAG00000024141	chd9	68	75.075	ENSPTRG00000008113	CHD9	92	71.273	Pan_troglodytes
ENSPNAG00000024141	chd9	87	66.876	ENSPANG00000019307	CHD9	95	71.429	Papio_anubis
ENSPNAG00000024141	chd9	99	70.665	ENSPKIG00000025401	-	98	64.199	Paramormyrops_kingsleyae
ENSPNAG00000024141	chd9	96	77.936	ENSPKIG00000021876	chd9	99	76.992	Paramormyrops_kingsleyae
ENSPNAG00000024141	chd9	57	77.907	ENSPSIG00000008099	CHD9	99	61.791	Pelodiscus_sinensis
ENSPNAG00000024141	chd9	87	71.677	ENSPCIG00000017215	CHD9	89	78.307	Phascolarctos_cinereus
ENSPNAG00000024141	chd9	97	77.377	ENSPFOG00000015839	chd9	97	69.220	Poecilia_formosa
ENSPNAG00000024141	chd9	97	78.005	ENSPLAG00000011118	chd9	96	78.241	Poecilia_latipinna
ENSPNAG00000024141	chd9	97	76.898	ENSPMEG00000015106	chd9	96	69.191	Poecilia_mexicana
ENSPNAG00000024141	chd9	97	77.737	ENSPREG00000006473	chd9	96	77.778	Poecilia_reticulata
ENSPNAG00000024141	chd9	68	75.075	ENSPPYG00000007348	CHD9	94	62.646	Pongo_abelii
ENSPNAG00000024141	chd9	74	80.237	ENSPCAG00000007564	CHD9	73	82.170	Procavia_capensis
ENSPNAG00000024141	chd9	68	72.890	ENSPCOG00000028433	CHD9	92	70.909	Propithecus_coquereli
ENSPNAG00000024141	chd9	95	72.918	ENSPVAG00000015617	CHD9	77	74.121	Pteropus_vampyrus
ENSPNAG00000024141	chd9	99	77.703	ENSPNYG00000010947	chd9	99	77.883	Pundamilia_nyererei
ENSPNAG00000024141	chd9	90	59.536	ENSRNOG00000049302	Chd9	89	70.837	Rattus_norvegicus
ENSPNAG00000024141	chd9	83	69.457	ENSRBIG00000035553	CHD9	95	71.429	Rhinopithecus_bieti
ENSPNAG00000024141	chd9	98	69.165	ENSRROG00000033278	CHD9	96	71.583	Rhinopithecus_roxellana
ENSPNAG00000024141	chd9	68	74.925	ENSSBOG00000030240	CHD9	92	71.273	Saimiri_boliviensis_boliviensis
ENSPNAG00000024141	chd9	99	69.100	ENSSHAG00000002719	CHD9	89	68.189	Sarcophilus_harrisii
ENSPNAG00000024141	chd9	97	78.340	ENSSFOG00015020209	chd9	99	77.597	Scleropages_formosus
ENSPNAG00000024141	chd9	99	73.674	ENSSFOG00015001327	chd9	97	74.172	Scleropages_formosus
ENSPNAG00000024141	chd9	97	78.197	ENSSMAG00000008953	chd9	97	78.160	Scophthalmus_maximus
ENSPNAG00000024141	chd9	99	77.467	ENSSDUG00000006139	chd9	99	77.605	Seriola_dumerili
ENSPNAG00000024141	chd9	99	77.848	ENSSLDG00000017818	chd9	99	78.197	Seriola_lalandi_dorsalis
ENSPNAG00000024141	chd9	71	79.399	ENSSARG00000010632	CHD9	59	79.399	Sorex_araneus
ENSPNAG00000024141	chd9	99	78.370	ENSSPAG00000021649	chd9	99	78.401	Stegastes_partitus
ENSPNAG00000024141	chd9	99	67.319	ENSSSCG00000033591	CHD9	67	69.565	Sus_scrofa
ENSPNAG00000024141	chd9	88	72.856	ENSTGUG00000007476	CHD9	92	68.834	Taeniopygia_guttata
ENSPNAG00000024141	chd9	99	75.676	ENSTRUG00000009125	chd9	99	68.352	Takifugu_rubripes
ENSPNAG00000024141	chd9	68	83.028	ENSTNIG00000003825	chd9	86	84.259	Tetraodon_nigroviridis
ENSPNAG00000024141	chd9	62	93.220	ENSTBEG00000016052	-	66	93.220	Tupaia_belangeri
ENSPNAG00000024141	chd9	88	70.680	ENSTTRG00000012674	CHD9	78	68.196	Tursiops_truncatus
ENSPNAG00000024141	chd9	78	87.367	ENSUMAG00000004043	CHD9	93	87.076	Ursus_maritimus
ENSPNAG00000024141	chd9	71	77.096	ENSVPAG00000001374	CHD9	83	70.842	Vicugna_pacos
ENSPNAG00000024141	chd9	68	75.524	ENSVVUG00000019435	CHD9	86	67.927	Vulpes_vulpes
ENSPNAG00000024141	chd9	99	66.950	ENSXETG00000000349	chd9	88	68.309	Xenopus_tropicalis
ENSPNAG00000024141	chd9	97	77.632	ENSXCOG00000012997	chd9	96	77.993	Xiphophorus_couchianus
ENSPNAG00000024141	chd9	97	78.195	ENSXMAG00000016192	chd9	96	78.808	Xiphophorus_maculatus