EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000024355 (Gene tree)
Gene ID
108433318
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Plus strand
Length
29935 bases
Position
chrKV575419.1:709300-739234
Accession
108433318
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000034812PABPPF00658.181.5e-3111
ENSPNAP00000034812RRM_5PF13893.62.6e-0811
ENSPNAP00000034812RRM_1PF00076.221.2e-9114
ENSPNAP00000034812RRM_1PF00076.221.2e-9124
ENSPNAP00000034812RRM_1PF00076.221.2e-9134
ENSPNAP00000034812RRM_1PF00076.221.2e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000026999-3231XM_017707795ENSPNAP00000034812631 (aa)XP_017563284UPI0008144759
Gene Model
Click here to download ENSPNAG00000024355's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000024355's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000024355pabpc45933.981ENSPNAG00000000408rbms2a5133.981
ENSPNAG00000024355pabpc45932.692ENSPNAG00000026763-7732.692
ENSPNAG00000024355pabpc48590.323ENSPNAG00000028408pabpc1a9290.323
ENSPNAG00000024355pabpc49764.873ENSPNAG00000021248pabpc1l9964.557
ENSPNAG00000024355pabpc49876.349ENSPNAG00000024626pabpc1b9975.873
ENSPNAG00000024355pabpc45936.145ENSPNAG00000003633elavl39236.145
ENSPNAG00000024355pabpc45834.940ENSPNAG00000017169elavl48734.940
ENSPNAG00000024355pabpc46139.773ENSPNAG00000007852rbm39a5140.278
ENSPNAG00000024355pabpc45837.500ENSPNAG00000013418celf15238.372
ENSPNAG00000024355pabpc45834.437ENSPNAG00000024381elavl1b9034.437
ENSPNAG00000024355pabpc45833.113ENSPNAG00000010909elavl1a9531.056
ENSPNAG00000024355pabpc45936.145ENSPNAG00000029068ELAVL28336.145
ENSPNAG00000024355pabpc45934.737ENSPNAG00000019569rbms2b5134.737
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000024355pabpc410084.494ENSG00000090621PABPC49996.396Homo_sapiens
ENSPNAG00000024355pabpc49994.212ENSAPOG00000001161pabpc49993.502Acanthochromis_polyacanthus
ENSPNAG00000024355pabpc49749.678ENSAMEG00000015083-9849.035Ailuropoda_melanoleuca
ENSPNAG00000024355pabpc410080.689ENSAMEG00000011535-10079.790Ailuropoda_melanoleuca
ENSPNAG00000024355pabpc410094.295ENSACIG00000023343pabpc49994.295Amphilophus_citrinellus
ENSPNAG00000024355pabpc49993.891ENSAOCG00000021529pabpc49993.185Amphiprion_ocellaris
ENSPNAG00000024355pabpc49993.891ENSAPEG00000019196pabpc49993.185Amphiprion_percula
ENSPNAG00000024355pabpc49994.222ENSATEG00000007402pabpc49993.354Anabas_testudineus
ENSPNAG00000024355pabpc410086.385ENSAPLG00000009729-10085.759Anas_platyrhynchos
ENSPNAG00000024355pabpc49985.891ENSACAG00000002544PABPC410085.185Anolis_carolinensis
ENSPNAG00000024355pabpc410084.038ENSANAG00000025079PABPC410083.412Aotus_nancymaae
ENSPNAG00000024355pabpc410093.978ENSACLG00000019558pabpc49993.978Astatotilapia_calliptera
ENSPNAG00000024355pabpc410090.709ENSAMXG00000018779pabpc410090.709Astyanax_mexicanus
ENSPNAG00000024355pabpc410081.346ENSBTAG00000017125PABPC410081.069Bos_taurus
ENSPNAG00000024355pabpc45883.333ENSBTAG00000048536-9383.333Bos_taurus
ENSPNAG00000024355pabpc410084.194ENSCJAG00000002512-10083.568Callithrix_jacchus
ENSPNAG00000024355pabpc47578.661ENSCJAG00000045953-9176.987Callithrix_jacchus
ENSPNAG00000024355pabpc410083.956ENSCAFG00000003081PABPC410083.255Canis_familiaris
ENSPNAG00000024355pabpc410080.838ENSCAFG00020004161PABPC410079.940Canis_lupus_dingo
ENSPNAG00000024355pabpc410065.789ENSCHIG00000023385-10065.325Capra_hircus
ENSPNAG00000024355pabpc410079.940ENSCHIG00000019398-10079.790Capra_hircus
ENSPNAG00000024355pabpc410084.351ENSTSYG00000006532PABPC410083.725Carlito_syrichta
ENSPNAG00000024355pabpc49982.512ENSCAPG00000015984PABPC410083.176Cavia_aperea
ENSPNAG00000024355pabpc410082.589ENSCPOG00000009552PABPC410083.568Cavia_porcellus
ENSPNAG00000024355pabpc410084.038ENSCCAG00000037306PABPC410083.412Cebus_capucinus
ENSPNAG00000024355pabpc410084.038ENSCATG00000042164PABPC410083.412Cercocebus_atys
ENSPNAG00000024355pabpc410082.435ENSCLAG00000011899PABPC410083.568Chinchilla_lanigera
ENSPNAG00000024355pabpc410080.090ENSCSAG00000001135PABPC410079.940Chlorocebus_sabaeus
ENSPNAG00000024355pabpc48689.211ENSCHOG00000005327PABPC47989.757Choloepus_hoffmanni
ENSPNAG00000024355pabpc410087.011ENSCPBG00000001038PABPC410086.385Chrysemys_picta_bellii
ENSPNAG00000024355pabpc49984.102ENSCANG00000034177PABPC410083.466Colobus_angolensis_palliatus
ENSPNAG00000024355pabpc49884.702ENSCGRG00001018166Pabpc49983.703Cricetulus_griseus_chok1gshd
ENSPNAG00000024355pabpc49784.779ENSCGRG00000009777Pabpc49983.762Cricetulus_griseus_crigri
ENSPNAG00000024355pabpc410092.417ENSCSEG00000000130pabpc410092.417Cynoglossus_semilaevis
ENSPNAG00000024355pabpc49993.881ENSCVAG00000019246pabpc410093.881Cyprinodon_variegatus
ENSPNAG00000024355pabpc49995.701ENSDARG00000059259pabpc410095.537Danio_rerio
ENSPNAG00000024355pabpc49982.632ENSDNOG00000018444-10082.187Dasypus_novemcinctus
ENSPNAG00000024355pabpc410081.595ENSDORG00000011581Pabpc410081.193Dipodomys_ordii
ENSPNAG00000024355pabpc48555.102ENSETEG00000009172-9953.604Echinops_telfairi
ENSPNAG00000024355pabpc410092.308ENSETEG00000018453-8492.308Echinops_telfairi
ENSPNAG00000024355pabpc49777.258ENSEBUG00000000992pabpc49976.935Eptatretus_burgeri
ENSPNAG00000024355pabpc49677.451ENSEBUG00000013782pabpc49976.763Eptatretus_burgeri
ENSPNAG00000024355pabpc410080.090ENSEASG00005014119PABPC410079.940Equus_asinus_asinus
ENSPNAG00000024355pabpc410080.090ENSECAG00000009396PABPC410079.940Equus_caballus
ENSPNAG00000024355pabpc49879.632ENSEEUG00000002962PABPC410078.443Erinaceus_europaeus
ENSPNAG00000024355pabpc49992.516ENSELUG00000003195pabpc49991.837Esox_lucius
ENSPNAG00000024355pabpc410083.956ENSFCAG00000015254-10083.255Felis_catus
ENSPNAG00000024355pabpc410086.385ENSFALG00000000543PABPC410085.759Ficedula_albicollis
ENSPNAG00000024355pabpc410080.240ENSFDAG00000020016-10079.940Fukomys_damarensis
ENSPNAG00000024355pabpc48853.191ENSFDAG00000010581-9950.950Fukomys_damarensis
ENSPNAG00000024355pabpc410093.502ENSFHEG00000007548pabpc49993.502Fundulus_heteroclitus
ENSPNAG00000024355pabpc49990.679ENSGMOG00000019025pabpc49990.679Gadus_morhua
ENSPNAG00000024355pabpc49987.107ENSGALG00000003800PABPC49986.478Gallus_gallus
ENSPNAG00000024355pabpc410092.247ENSGAFG00000018195pabpc410096.651Gambusia_affinis
ENSPNAG00000024355pabpc410091.284ENSGACG00000007179pabpc49991.284Gasterosteus_aculeatus
ENSPNAG00000024355pabpc49987.402ENSGAGG00000001888PABPC49986.772Gopherus_agassizii
ENSPNAG00000024355pabpc410084.038ENSGGOG00000004002PABPC410083.412Gorilla_gorilla
ENSPNAG00000024355pabpc410093.819ENSHBUG00000020206pabpc49993.819Haplochromis_burtoni
ENSPNAG00000024355pabpc410082.435ENSHGLG00000011162PABPC410083.412Heterocephalus_glaber_female
ENSPNAG00000024355pabpc410082.435ENSHGLG00100001580PABPC410083.412Heterocephalus_glaber_male
ENSPNAG00000024355pabpc410091.125ENSHCOG00000012694pabpc49992.076Hippocampus_comes
ENSPNAG00000024355pabpc49895.330ENSIPUG00000016620pabpc410094.331Ictalurus_punctatus
ENSPNAG00000024355pabpc410084.177ENSSTOG00000010416PABPC410083.544Ictidomys_tridecemlineatus
ENSPNAG00000024355pabpc410080.031ENSJJAG00000007781Pabpc410079.817Jaculus_jaculus
ENSPNAG00000024355pabpc410092.101ENSKMAG00000013597pabpc410092.101Kryptolebias_marmoratus
ENSPNAG00000024355pabpc410091.969ENSLBEG00000013654pabpc410091.969Labrus_bergylta
ENSPNAG00000024355pabpc49987.579ENSLACG00000011907PABPC49987.107Latimeria_chalumnae
ENSPNAG00000024355pabpc410092.296ENSLOCG00000001877pabpc410092.296Lepisosteus_oculatus
ENSPNAG00000024355pabpc410084.494ENSLAFG00000000151PABPC410083.861Loxodonta_africana
ENSPNAG00000024355pabpc410084.038ENSMFAG00000041481PABPC410083.412Macaca_fascicularis
ENSPNAG00000024355pabpc410080.090ENSMMUG00000007497PABPC410079.940Macaca_mulatta
ENSPNAG00000024355pabpc410084.038ENSMNEG00000043054PABPC410083.307Macaca_nemestrina
ENSPNAG00000024355pabpc410084.038ENSMLEG00000040716PABPC410083.412Mandrillus_leucophaeus
ENSPNAG00000024355pabpc49994.212ENSMAMG00000010025pabpc49993.344Mastacembelus_armatus
ENSPNAG00000024355pabpc410093.819ENSMZEG00005006141pabpc49993.819Maylandia_zebra
ENSPNAG00000024355pabpc49983.389ENSMGAG00000005408PABPC410082.857Meleagris_gallopavo
ENSPNAG00000024355pabpc47279.524ENSMAUG00000001295-9778.571Mesocricetus_auratus
ENSPNAG00000024355pabpc47689.583ENSMAUG00000019763-8485.981Mesocricetus_auratus
ENSPNAG00000024355pabpc45782.036ENSMAUG00000004089-8982.036Mesocricetus_auratus
ENSPNAG00000024355pabpc49975.133ENSMICG00000036729-10073.890Microcebus_murinus
ENSPNAG00000024355pabpc48884.436ENSMICG00000016633-10083.957Microcebus_murinus
ENSPNAG00000024355pabpc49983.520ENSMOCG00000006763Pabpc49983.412Microtus_ochrogaster
ENSPNAG00000024355pabpc410089.857ENSMMOG00000002363pabpc49989.011Mola_mola
ENSPNAG00000024355pabpc45970.667ENSMODG00000018051-9670.667Monodelphis_domestica
ENSPNAG00000024355pabpc49883.231ENSMODG00000017657-10082.105Monodelphis_domestica
ENSPNAG00000024355pabpc49994.231ENSMALG00000011017pabpc49993.207Monopterus_albus
ENSPNAG00000024355pabpc49869.932MGP_CAROLIEiJ_G0024864-10073.016Mus_caroli
ENSPNAG00000024355pabpc49979.850MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSPNAG00000024355pabpc410084.019ENSMUSG00000011257Pabpc410095.266Mus_musculus
ENSPNAG00000024355pabpc49979.939MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSPNAG00000024355pabpc49970.332MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSPNAG00000024355pabpc49545.977ENSMPUG00000006836-10045.634Mustela_putorius_furo
ENSPNAG00000024355pabpc410080.838ENSMPUG00000014414-10079.940Mustela_putorius_furo
ENSPNAG00000024355pabpc410084.494ENSMLUG00000012068PABPC410083.861Myotis_lucifugus
ENSPNAG00000024355pabpc410084.494ENSNGAG00000018292Pabpc410083.861Nannospalax_galili
ENSPNAG00000024355pabpc46598.795ENSNBRG00000010047-7298.795Neolamprologus_brichardi
ENSPNAG00000024355pabpc45997.115ENSNBRG00000009708pabpc49897.115Neolamprologus_brichardi
ENSPNAG00000024355pabpc410084.038ENSNLEG00000011928PABPC410083.412Nomascus_leucogenys
ENSPNAG00000024355pabpc48590.476ENSOPRG00000011984PABPC48690.476Ochotona_princeps
ENSPNAG00000024355pabpc410083.619ENSODEG00000006592-10083.255Octodon_degus
ENSPNAG00000024355pabpc49974.530ENSODEG00000017434-10073.499Octodon_degus
ENSPNAG00000024355pabpc45382.857ENSODEG00000013457-10082.857Octodon_degus
ENSPNAG00000024355pabpc410093.978ENSONIG00000008176pabpc49993.978Oreochromis_niloticus
ENSPNAG00000024355pabpc49986.656ENSOANG00000010001PABPC49986.028Ornithorhynchus_anatinus
ENSPNAG00000024355pabpc49580.721ENSOCUG00000000562PABPC48880.564Oryctolagus_cuniculus
ENSPNAG00000024355pabpc49994.769ENSORLG00000017479pabpc49994.769Oryzias_latipes
ENSPNAG00000024355pabpc49994.769ENSORLG00020018644pabpc49994.769Oryzias_latipes_hni
ENSPNAG00000024355pabpc49994.769ENSORLG00015015042pabpc49994.769Oryzias_latipes_hsok
ENSPNAG00000024355pabpc49992.605ENSOMEG00000014410pabpc49991.930Oryzias_melastigma
ENSPNAG00000024355pabpc410081.374ENSOGAG00000004067PABPC410081.126Otolemur_garnettii
ENSPNAG00000024355pabpc410079.940ENSOARG00000020060PABPC410079.790Ovis_aries
ENSPNAG00000024355pabpc410084.038ENSPPAG00000043625PABPC410083.412Pan_paniscus
ENSPNAG00000024355pabpc410083.956ENSPPRG00000024727PABPC410083.255Panthera_pardus
ENSPNAG00000024355pabpc410083.956ENSPTIG00000005829PABPC410083.255Panthera_tigris_altaica
ENSPNAG00000024355pabpc410084.038ENSPTRG00000000573PABPC410083.412Pan_troglodytes
ENSPNAG00000024355pabpc410084.038ENSPANG00000009484PABPC410083.412Papio_anubis
ENSPNAG00000024355pabpc49992.834ENSPKIG00000025356pabpc49892.834Paramormyrops_kingsleyae
ENSPNAG00000024355pabpc410087.324ENSPSIG00000016892PABPC410086.698Pelodiscus_sinensis
ENSPNAG00000024355pabpc49989.189ENSPMGG00000009073pabpc49988.394Periophthalmus_magnuspinnatus
ENSPNAG00000024355pabpc410082.435ENSPEMG00000023569-10083.568Peromyscus_maniculatus_bairdii
ENSPNAG00000024355pabpc410080.124ENSPEMG00000024193-10079.627Peromyscus_maniculatus_bairdii
ENSPNAG00000024355pabpc49672.973ENSPMAG00000007885pabpc49972.414Petromyzon_marinus
ENSPNAG00000024355pabpc48774.824ENSPMAG00000002836pabpc49975.704Petromyzon_marinus
ENSPNAG00000024355pabpc49693.349ENSPCIG00000020674PABPC410093.932Phascolarctos_cinereus
ENSPNAG00000024355pabpc410092.868ENSPFOG00000002682pabpc49992.868Poecilia_formosa
ENSPNAG00000024355pabpc410092.868ENSPLAG00000010112pabpc49992.868Poecilia_latipinna
ENSPNAG00000024355pabpc49993.730ENSPMEG00000019739pabpc49993.027Poecilia_mexicana
ENSPNAG00000024355pabpc410093.196ENSPREG00000001589pabpc410093.196Poecilia_reticulata
ENSPNAG00000024355pabpc410080.090ENSPPYG00000001506PABPC410079.940Pongo_abelii
ENSPNAG00000024355pabpc410075.299ENSPCAG00000003341PABPC410075.150Procavia_capensis
ENSPNAG00000024355pabpc410069.037ENSPCOG00000025882-10069.037Propithecus_coquereli
ENSPNAG00000024355pabpc410083.670ENSPCOG00000023725-10083.281Propithecus_coquereli
ENSPNAG00000024355pabpc49879.236ENSPVAG00000002187PABPC410078.571Pteropus_vampyrus
ENSPNAG00000024355pabpc410093.978ENSPNYG00000006134pabpc49993.978Pundamilia_nyererei
ENSPNAG00000024355pabpc410081.442ENSRNOG00000015642Pabpc410081.193Rattus_norvegicus
ENSPNAG00000024355pabpc410079.294ENSRNOG00000028592AABR07035074.110079.052Rattus_norvegicus
ENSPNAG00000024355pabpc410084.038ENSRBIG00000039761PABPC410083.412Rhinopithecus_bieti
ENSPNAG00000024355pabpc410084.038ENSRROG00000033355PABPC410083.412Rhinopithecus_roxellana
ENSPNAG00000024355pabpc410084.038ENSSBOG00000026193PABPC410083.412Saimiri_boliviensis_boliviensis
ENSPNAG00000024355pabpc49886.058ENSSHAG00000018139PABPC410084.820Sarcophilus_harrisii
ENSPNAG00000024355pabpc49992.320ENSSFOG00015023514pabpc410092.320Scleropages_formosus
ENSPNAG00000024355pabpc410092.101ENSSMAG00000009007pabpc410092.101Scophthalmus_maximus
ENSPNAG00000024355pabpc49994.212ENSSDUG00000012683pabpc49993.185Seriola_dumerili
ENSPNAG00000024355pabpc49994.212ENSSLDG00000013025pabpc49993.185Seriola_lalandi_dorsalis
ENSPNAG00000024355pabpc410073.353ENSSARG00000000310PABPC410073.204Sorex_araneus
ENSPNAG00000024355pabpc410087.204ENSSPUG00000003204PABPC410086.572Sphenodon_punctatus
ENSPNAG00000024355pabpc49994.212ENSSPAG00000009252pabpc49993.344Stegastes_partitus
ENSPNAG00000024355pabpc48844.621ENSSSCG00000036170-9644.621Sus_scrofa
ENSPNAG00000024355pabpc410084.038ENSSSCG00000003660-10083.412Sus_scrofa
ENSPNAG00000024355pabpc410081.642ENSTGUG00000001266PABPC410081.940Taeniopygia_guttata
ENSPNAG00000024355pabpc410091.759ENSTRUG00000005907pabpc49991.759Takifugu_rubripes
ENSPNAG00000024355pabpc410085.261ENSTNIG00000016902pabpc49984.945Tetraodon_nigroviridis
ENSPNAG00000024355pabpc49968.771ENSTBEG00000009035PABPC410068.605Tupaia_belangeri
ENSPNAG00000024355pabpc49962.760ENSTTRG00000014340PABPC410067.774Tursiops_truncatus
ENSPNAG00000024355pabpc410083.956ENSUAMG00000000303PABPC410083.412Ursus_americanus
ENSPNAG00000024355pabpc49982.632ENSUMAG00000019585PABPC49991.827Ursus_maritimus
ENSPNAG00000024355pabpc47370.588ENSVPAG00000010041PABPC47370.588Vicugna_pacos
ENSPNAG00000024355pabpc410083.956ENSVVUG00000005215PABPC410083.255Vulpes_vulpes
ENSPNAG00000024355pabpc49983.201ENSXETG00000010946pabpc49982.567Xenopus_tropicalis
ENSPNAG00000024355pabpc46697.561ENSXETG00000027221-9897.561Xenopus_tropicalis
ENSPNAG00000024355pabpc49990.300ENSXCOG00000013190pabpc49695.283Xiphophorus_couchianus
ENSPNAG00000024355pabpc410093.038ENSXMAG00000019007pabpc410093.038Xiphophorus_maculatus

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