EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000024395 (Gene tree)
Gene ID: 108438863
Gene Symbol: cpsf1
Alias: wu:fb24c01
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 44934 bases
Position: chrKV575571.1:841057-885990
Accession: 108438863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000017961	CPSF_A	PF03178.15	1.5e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000026982	-	4188	XM_017716948	ENSPNAP00000017961	1395 (aa)	XP_017572437	-

Gene Model

Click here to download ENSPNAG00000024395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000024395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000024395	cpsf1	100	75.362	ENSG00000071894	CPSF1	99	78.723	Homo_sapiens
ENSPNAG00000024395	cpsf1	100	81.424	ENSAPOG00000019621	cpsf1	100	81.695	Acanthochromis_polyacanthus
ENSPNAG00000024395	cpsf1	96	76.343	ENSAMEG00000005557	CPSF1	99	76.343	Ailuropoda_melanoleuca
ENSPNAG00000024395	cpsf1	100	81.233	ENSACIG00000006112	cpsf1	100	81.579	Amphilophus_citrinellus
ENSPNAG00000024395	cpsf1	100	82.150	ENSAOCG00000007120	cpsf1	100	82.219	Amphiprion_ocellaris
ENSPNAG00000024395	cpsf1	100	82.725	ENSAPEG00000005755	cpsf1	100	82.863	Amphiprion_percula
ENSPNAG00000024395	cpsf1	100	80.907	ENSATEG00000011097	cpsf1	100	81.517	Anabas_testudineus
ENSPNAG00000024395	cpsf1	93	73.259	ENSACAG00000009655	CPSF1	100	73.259	Anolis_carolinensis
ENSPNAG00000024395	cpsf1	100	75.345	ENSANAG00000036514	CPSF1	100	75.345	Aotus_nancymaae
ENSPNAG00000024395	cpsf1	100	81.562	ENSACLG00000012231	cpsf1	100	81.562	Astatotilapia_calliptera
ENSPNAG00000024395	cpsf1	100	82.682	ENSAMXG00000008485	cpsf1	100	82.961	Astyanax_mexicanus
ENSPNAG00000024395	cpsf1	100	73.627	ENSBTAG00000008355	CPSF1	100	74.247	Bos_taurus
ENSPNAG00000024395	cpsf1	100	32.672	WBGene00022301	cpsf-1	99	38.810	Caenorhabditis_elegans
ENSPNAG00000024395	cpsf1	100	75.276	ENSCJAG00000021421	CPSF1	100	75.276	Callithrix_jacchus
ENSPNAG00000024395	cpsf1	96	75.865	ENSCAFG00000001600	CPSF1	99	75.865	Canis_familiaris
ENSPNAG00000024395	cpsf1	100	75.310	ENSCAFG00020020821	CPSF1	100	75.310	Canis_lupus_dingo
ENSPNAG00000024395	cpsf1	100	72.125	ENSCHIG00000015833	CPSF1	100	72.125	Capra_hircus
ENSPNAG00000024395	cpsf1	100	75.776	ENSTSYG00000028560	CPSF1	100	75.776	Carlito_syrichta
ENSPNAG00000024395	cpsf1	97	74.570	ENSCAPG00000014921	CPSF1	99	74.570	Cavia_aperea
ENSPNAG00000024395	cpsf1	100	73.982	ENSCPOG00000011448	CPSF1	100	73.982	Cavia_porcellus
ENSPNAG00000024395	cpsf1	100	75.345	ENSCCAG00000037658	CPSF1	100	75.345	Cebus_capucinus
ENSPNAG00000024395	cpsf1	100	75.207	ENSCATG00000037234	CPSF1	99	79.701	Cercocebus_atys
ENSPNAG00000024395	cpsf1	100	75.121	ENSCLAG00000012166	CPSF1	100	75.121	Chinchilla_lanigera
ENSPNAG00000024395	cpsf1	100	75.276	ENSCSAG00000008502	CPSF1	100	75.276	Chlorocebus_sabaeus
ENSPNAG00000024395	cpsf1	99	77.213	ENSCPBG00000018910	CPSF1	96	77.213	Chrysemys_picta_bellii
ENSPNAG00000024395	cpsf1	93	47.015	ENSCING00000000514	-	97	47.015	Ciona_intestinalis
ENSPNAG00000024395	cpsf1	99	46.717	ENSCSAVG00000002293	-	99	46.543	Ciona_savignyi
ENSPNAG00000024395	cpsf1	98	72.669	ENSCANG00000032760	CPSF1	99	72.669	Colobus_angolensis_palliatus
ENSPNAG00000024395	cpsf1	100	75.000	ENSCGRG00001016344	Cpsf1	100	75.000	Cricetulus_griseus_chok1gshd
ENSPNAG00000024395	cpsf1	100	73.412	ENSCGRG00000003118	Cpsf1	100	73.412	Cricetulus_griseus_crigri
ENSPNAG00000024395	cpsf1	100	80.726	ENSCSEG00000013464	cpsf1	100	80.796	Cynoglossus_semilaevis
ENSPNAG00000024395	cpsf1	85	82.178	ENSCVAG00000014059	cpsf1	89	82.178	Cyprinodon_variegatus
ENSPNAG00000024395	cpsf1	100	85.183	ENSDARG00000034178	cpsf1	100	85.320	Danio_rerio
ENSPNAG00000024395	cpsf1	56	79.130	ENSDNOG00000043654	CPSF1	94	79.130	Dasypus_novemcinctus
ENSPNAG00000024395	cpsf1	97	75.108	ENSDORG00000006278	Cpsf1	99	75.108	Dipodomys_ordii
ENSPNAG00000024395	cpsf1	100	41.768	FBgn0024698	Cpsf160	100	41.700	Drosophila_melanogaster
ENSPNAG00000024395	cpsf1	80	68.658	ENSETEG00000006022	CPSF1	83	68.658	Echinops_telfairi
ENSPNAG00000024395	cpsf1	100	75.379	ENSEASG00005010774	CPSF1	100	75.379	Equus_asinus_asinus
ENSPNAG00000024395	cpsf1	100	75.310	ENSECAG00000022209	CPSF1	100	75.310	Equus_caballus
ENSPNAG00000024395	cpsf1	100	74.811	ENSEEUG00000000471	CPSF1	100	74.811	Erinaceus_europaeus
ENSPNAG00000024395	cpsf1	100	81.172	ENSELUG00000012271	cpsf1	100	81.943	Esox_lucius
ENSPNAG00000024395	cpsf1	100	75.519	ENSFDAG00000016060	CPSF1	100	75.519	Fukomys_damarensis
ENSPNAG00000024395	cpsf1	100	80.083	ENSFHEG00000016801	cpsf1	100	80.222	Fundulus_heteroclitus
ENSPNAG00000024395	cpsf1	100	80.483	ENSGMOG00000000796	cpsf1	100	80.966	Gadus_morhua
ENSPNAG00000024395	cpsf1	96	85.714	ENSGAFG00000018890	cpsf1	100	85.714	Gambusia_affinis
ENSPNAG00000024395	cpsf1	100	81.831	ENSGACG00000008703	cpsf1	100	82.037	Gasterosteus_aculeatus
ENSPNAG00000024395	cpsf1	100	74.586	ENSGAGG00000004276	CPSF1	98	79.800	Gopherus_agassizii
ENSPNAG00000024395	cpsf1	100	75.466	ENSGGOG00000016185	CPSF1	100	75.466	Gorilla_gorilla
ENSPNAG00000024395	cpsf1	100	83.578	ENSHBUG00000018900	cpsf1	100	83.578	Haplochromis_burtoni
ENSPNAG00000024395	cpsf1	100	75.121	ENSHGLG00000016139	CPSF1	100	75.121	Heterocephalus_glaber_female
ENSPNAG00000024395	cpsf1	100	75.052	ENSHGLG00100009750	CPSF1	100	75.052	Heterocephalus_glaber_male
ENSPNAG00000024395	cpsf1	100	79.646	ENSHCOG00000018509	cpsf1	100	79.918	Hippocampus_comes
ENSPNAG00000024395	cpsf1	100	82.442	ENSIPUG00000011259	cpsf1	100	82.442	Ictalurus_punctatus
ENSPNAG00000024395	cpsf1	97	75.071	ENSSTOG00000009957	CPSF1	99	75.071	Ictidomys_tridecemlineatus
ENSPNAG00000024395	cpsf1	100	75.589	ENSJJAG00000023002	Cpsf1	100	75.589	Jaculus_jaculus
ENSPNAG00000024395	cpsf1	91	82.132	ENSKMAG00000001940	cpsf1	99	82.132	Kryptolebias_marmoratus
ENSPNAG00000024395	cpsf1	100	80.258	ENSLBEG00000003601	cpsf1	100	80.567	Labrus_bergylta
ENSPNAG00000024395	cpsf1	89	74.702	ENSLACG00000000233	CPSF1	100	66.389	Latimeria_chalumnae
ENSPNAG00000024395	cpsf1	100	78.473	ENSLOCG00000008484	cpsf1	100	79.023	Lepisosteus_oculatus
ENSPNAG00000024395	cpsf1	96	75.648	ENSLAFG00000022601	CPSF1	99	75.648	Loxodonta_africana
ENSPNAG00000024395	cpsf1	100	75.276	ENSMFAG00000037013	CPSF1	99	79.701	Macaca_fascicularis
ENSPNAG00000024395	cpsf1	100	75.276	ENSMMUG00000007380	CPSF1	97	80.831	Macaca_mulatta
ENSPNAG00000024395	cpsf1	97	75.573	ENSMNEG00000043564	CPSF1	99	75.573	Macaca_nemestrina
ENSPNAG00000024395	cpsf1	100	75.276	ENSMLEG00000043010	CPSF1	99	79.701	Mandrillus_leucophaeus
ENSPNAG00000024395	cpsf1	100	81.246	ENSMAMG00000003803	cpsf1	100	81.449	Mastacembelus_armatus
ENSPNAG00000024395	cpsf1	100	81.588	ENSMZEG00005001168	cpsf1	100	81.588	Maylandia_zebra
ENSPNAG00000024395	cpsf1	100	74.862	ENSMAUG00000003601	Cpsf1	100	74.862	Mesocricetus_auratus
ENSPNAG00000024395	cpsf1	100	75.190	ENSMICG00000015767	CPSF1	100	75.190	Microcebus_murinus
ENSPNAG00000024395	cpsf1	100	75.086	ENSMOCG00000022758	Cpsf1	100	75.086	Microtus_ochrogaster
ENSPNAG00000024395	cpsf1	100	82.927	ENSMMOG00000021245	cpsf1	100	82.927	Mola_mola
ENSPNAG00000024395	cpsf1	100	75.618	ENSMODG00000010755	CPSF1	100	75.618	Monodelphis_domestica
ENSPNAG00000024395	cpsf1	100	81.288	ENSMALG00000020545	cpsf1	100	81.559	Monopterus_albus
ENSPNAG00000024395	cpsf1	100	74.983	MGP_CAROLIEiJ_G0019936	Cpsf1	100	74.983	Mus_caroli
ENSPNAG00000024395	cpsf1	100	74.983	ENSMUSG00000034022	Cpsf1	100	74.983	Mus_musculus
ENSPNAG00000024395	cpsf1	100	75.069	MGP_PahariEiJ_G0019946	Cpsf1	100	75.069	Mus_pahari
ENSPNAG00000024395	cpsf1	100	74.983	MGP_SPRETEiJ_G0020839	Cpsf1	100	74.983	Mus_spretus
ENSPNAG00000024395	cpsf1	94	74.963	ENSMPUG00000006419	CPSF1	93	74.963	Mustela_putorius_furo
ENSPNAG00000024395	cpsf1	100	75.000	ENSNGAG00000022460	Cpsf1	100	75.000	Nannospalax_galili
ENSPNAG00000024395	cpsf1	100	78.407	ENSNBRG00000000813	cpsf1	100	78.337	Neolamprologus_brichardi
ENSPNAG00000024395	cpsf1	85	67.032	ENSNLEG00000010633	-	99	67.032	Nomascus_leucogenys
ENSPNAG00000024395	cpsf1	81	73.498	ENSMEUG00000014922	CPSF1	84	73.793	Notamacropus_eugenii
ENSPNAG00000024395	cpsf1	55	87.831	ENSOPRG00000004693	-	63	87.831	Ochotona_princeps
ENSPNAG00000024395	cpsf1	100	75.190	ENSODEG00000013995	CPSF1	100	75.190	Octodon_degus
ENSPNAG00000024395	cpsf1	100	82.597	ENSONIG00000007676	cpsf1	100	82.735	Oreochromis_niloticus
ENSPNAG00000024395	cpsf1	58	78.571	ENSOANG00000010716	CPSF1	89	78.571	Ornithorhynchus_anatinus
ENSPNAG00000024395	cpsf1	100	79.782	ENSORLG00000013544	cpsf1	92	91.770	Oryzias_latipes
ENSPNAG00000024395	cpsf1	100	79.850	ENSORLG00020021693	cpsf1	92	91.770	Oryzias_latipes_hni
ENSPNAG00000024395	cpsf1	100	79.850	ENSORLG00015009979	cpsf1	100	79.918	Oryzias_latipes_hsok
ENSPNAG00000024395	cpsf1	100	79.986	ENSOMEG00000011849	cpsf1	100	80.191	Oryzias_melastigma
ENSPNAG00000024395	cpsf1	100	75.345	ENSOGAG00000000315	CPSF1	100	75.345	Otolemur_garnettii
ENSPNAG00000024395	cpsf1	100	75.483	ENSPPAG00000019280	CPSF1	100	75.483	Pan_paniscus
ENSPNAG00000024395	cpsf1	100	75.483	ENSPTRG00000049288	-	100	75.483	Pan_troglodytes
ENSPNAG00000024395	cpsf1	100	74.202	ENSPTRG00000051253	-	100	74.202	Pan_troglodytes
ENSPNAG00000024395	cpsf1	97	75.573	ENSPANG00000015005	CPSF1	99	75.573	Papio_anubis
ENSPNAG00000024395	cpsf1	100	84.221	ENSPKIG00000002582	cpsf1	100	84.451	Paramormyrops_kingsleyae
ENSPNAG00000024395	cpsf1	100	75.618	ENSPCIG00000009035	CPSF1	100	75.618	Phascolarctos_cinereus
ENSPNAG00000024395	cpsf1	100	78.320	ENSPFOG00000012870	cpsf1	100	78.862	Poecilia_formosa
ENSPNAG00000024395	cpsf1	100	79.215	ENSPREG00000016307	cpsf1	100	79.215	Poecilia_reticulata
ENSPNAG00000024395	cpsf1	100	68.763	ENSPPYG00000018973	CPSF1	100	69.178	Pongo_abelii
ENSPNAG00000024395	cpsf1	91	76.420	ENSPCAG00000011541	CPSF1	93	76.420	Procavia_capensis
ENSPNAG00000024395	cpsf1	100	74.826	ENSPCOG00000020001	CPSF1	100	74.826	Propithecus_coquereli
ENSPNAG00000024395	cpsf1	90	78.857	ENSPVAG00000006761	CPSF1	91	78.857	Pteropus_vampyrus
ENSPNAG00000024395	cpsf1	100	82.483	ENSPNYG00000004906	cpsf1	100	82.483	Pundamilia_nyererei
ENSPNAG00000024395	cpsf1	100	75.035	ENSRNOG00000030705	Cpsf1	100	75.035	Rattus_norvegicus
ENSPNAG00000024395	cpsf1	100	75.207	ENSRBIG00000044907	CPSF1	99	79.464	Rhinopithecus_bieti
ENSPNAG00000024395	cpsf1	100	75.276	ENSRROG00000044861	CPSF1	99	79.464	Rhinopithecus_roxellana
ENSPNAG00000024395	cpsf1	97	75.430	ENSSBOG00000027177	CPSF1	99	75.430	Saimiri_boliviensis_boliviensis
ENSPNAG00000024395	cpsf1	100	75.343	ENSSHAG00000006500	CPSF1	100	75.343	Sarcophilus_harrisii
ENSPNAG00000024395	cpsf1	100	81.831	ENSSFOG00015004606	cpsf1	100	84.532	Scleropages_formosus
ENSPNAG00000024395	cpsf1	100	81.127	ENSSMAG00000020547	cpsf1	100	81.738	Scophthalmus_maximus
ENSPNAG00000024395	cpsf1	100	84.480	ENSSDUG00000001100	cpsf1	100	84.480	Seriola_dumerili
ENSPNAG00000024395	cpsf1	100	84.551	ENSSLDG00000003619	cpsf1	100	84.621	Seriola_lalandi_dorsalis
ENSPNAG00000024395	cpsf1	89	75.000	ENSSARG00000003643	CPSF1	92	75.000	Sorex_araneus
ENSPNAG00000024395	cpsf1	96	77.714	ENSSPUG00000014396	CPSF1	100	77.858	Sphenodon_punctatus
ENSPNAG00000024395	cpsf1	100	81.886	ENSSPAG00000005349	cpsf1	100	82.090	Stegastes_partitus
ENSPNAG00000024395	cpsf1	100	74.586	ENSSSCG00000005906	CPSF1	100	74.586	Sus_scrofa
ENSPNAG00000024395	cpsf1	96	80.000	ENSTRUG00000013134	cpsf1	99	80.000	Takifugu_rubripes
ENSPNAG00000024395	cpsf1	100	80.521	ENSTNIG00000014027	cpsf1	100	80.521	Tetraodon_nigroviridis
ENSPNAG00000024395	cpsf1	77	70.578	ENSTBEG00000001756	CPSF1	91	70.578	Tupaia_belangeri
ENSPNAG00000024395	cpsf1	89	76.990	ENSTTRG00000001937	CPSF1	90	76.990	Tursiops_truncatus
ENSPNAG00000024395	cpsf1	96	75.648	ENSUAMG00000006476	CPSF1	97	75.648	Ursus_americanus
ENSPNAG00000024395	cpsf1	100	80.697	ENSXCOG00000003608	cpsf1	100	80.976	Xiphophorus_couchianus
ENSPNAG00000024395	cpsf1	100	79.778	ENSXMAG00000005798	cpsf1	100	79.986	Xiphophorus_maculatus