EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000024532 (Gene tree)
Gene ID: 108423597
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 3910 bases
Position: chrKV575303.1:4018225-4022134
Accession: 108423597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000018165	zf-C2H2	PF00096.26	1.2e-09	1	2
ENSPNAP00000018165	zf-C2H2	PF00096.26	1.2e-09	2	2
ENSPNAP00000018165	zf-met	PF12874.7	7.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000027265	-	1107	XM_017690996	ENSPNAP00000018165	368 (aa)	XP_017546485	UPI00081480D3

Gene Model

Click here to download ENSPNAG00000024532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000024532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000024532	prdm12b	60	41.892	ENSPNAG00000023191	-	87	41.892
ENSPNAG00000024532	prdm12b	100	77.573	ENSPNAG00000013396	PRDM12	100	77.632
ENSPNAG00000024532	prdm12b	50	31.852	ENSPNAG00000004784	-	60	35.398
ENSPNAG00000024532	prdm12b	62	36.000	ENSPNAG00000021304	PRDM15	51	36.000
ENSPNAG00000024532	prdm12b	71	40.000	ENSPNAG00000026181	prdm5	96	42.105
ENSPNAG00000024532	prdm12b	52	47.222	ENSPNAG00000005829	-	84	43.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000024532	prdm12b	90	88.554	ENSG00000130711	PRDM12	99	81.769	Homo_sapiens
ENSPNAG00000024532	prdm12b	100	67.021	ENSAPOG00000018234	-	100	66.755	Acanthochromis_polyacanthus
ENSPNAG00000024532	prdm12b	100	82.292	ENSAPOG00000016051	prdm12b	100	82.552	Acanthochromis_polyacanthus
ENSPNAG00000024532	prdm12b	89	85.410	ENSAMEG00000016234	PRDM12	99	85.410	Ailuropoda_melanoleuca
ENSPNAG00000024532	prdm12b	100	80.208	ENSACIG00000005193	-	100	77.806	Amphilophus_citrinellus
ENSPNAG00000024532	prdm12b	100	82.586	ENSACIG00000019578	prdm12b	100	82.586	Amphilophus_citrinellus
ENSPNAG00000024532	prdm12b	100	82.895	ENSAOCG00000015040	prdm12b	100	83.158	Amphiprion_ocellaris
ENSPNAG00000024532	prdm12b	100	75.773	ENSAPEG00000022849	-	99	76.546	Amphiprion_percula
ENSPNAG00000024532	prdm12b	100	83.820	ENSAPEG00000015092	prdm12b	100	84.085	Amphiprion_percula
ENSPNAG00000024532	prdm12b	100	81.558	ENSATEG00000014595	-	100	81.039	Anabas_testudineus
ENSPNAG00000024532	prdm12b	94	86.744	ENSANAG00000020616	PRDM12	96	88.323	Aotus_nancymaae
ENSPNAG00000024532	prdm12b	100	83.514	ENSACLG00000011876	prdm12b	100	83.243	Astatotilapia_calliptera
ENSPNAG00000024532	prdm12b	100	79.949	ENSACLG00000007631	-	100	79.188	Astatotilapia_calliptera
ENSPNAG00000024532	prdm12b	100	82.609	ENSAMXG00000008540	PRDM12	100	82.609	Astyanax_mexicanus
ENSPNAG00000024532	prdm12b	100	96.486	ENSAMXG00000033665	prdm12b	100	96.486	Astyanax_mexicanus
ENSPNAG00000024532	prdm12b	91	88.922	ENSBTAG00000023797	PRDM12	99	83.696	Bos_taurus
ENSPNAG00000024532	prdm12b	91	88.323	ENSCJAG00000020540	PRDM12	99	82.880	Callithrix_jacchus
ENSPNAG00000024532	prdm12b	79	89.726	ENSCAFG00000023076	PRDM12	99	82.477	Canis_familiaris
ENSPNAG00000024532	prdm12b	91	88.922	ENSCAFG00020024046	PRDM12	99	82.574	Canis_lupus_dingo
ENSPNAG00000024532	prdm12b	91	88.922	ENSCHIG00000025005	PRDM12	99	83.424	Capra_hircus
ENSPNAG00000024532	prdm12b	86	88.050	ENSCPOG00000005901	PRDM12	95	88.050	Cavia_porcellus
ENSPNAG00000024532	prdm12b	91	88.323	ENSCCAG00000037485	PRDM12	99	82.880	Cebus_capucinus
ENSPNAG00000024532	prdm12b	91	88.323	ENSCATG00000020327	PRDM12	99	82.880	Cercocebus_atys
ENSPNAG00000024532	prdm12b	91	88.323	ENSCLAG00000005499	PRDM12	90	88.323	Chinchilla_lanigera
ENSPNAG00000024532	prdm12b	91	88.323	ENSCSAG00000014756	PRDM12	99	82.038	Chlorocebus_sabaeus
ENSPNAG00000024532	prdm12b	100	86.141	ENSCPBG00000022628	PRDM12	99	84.783	Chrysemys_picta_bellii
ENSPNAG00000024532	prdm12b	91	88.922	ENSCGRG00001015005	Prdm12	99	82.574	Cricetulus_griseus_chok1gshd
ENSPNAG00000024532	prdm12b	100	78.974	ENSCVAG00000000944	-	100	80.000	Cyprinodon_variegatus
ENSPNAG00000024532	prdm12b	100	83.333	ENSCVAG00000017166	prdm12b	100	82.713	Cyprinodon_variegatus
ENSPNAG00000024532	prdm12b	100	92.663	ENSDARG00000007430	prdm12b	100	91.576	Danio_rerio
ENSPNAG00000024532	prdm12b	90	88.358	ENSDNOG00000042302	PRDM12	99	83.198	Dasypus_novemcinctus
ENSPNAG00000024532	prdm12b	87	66.472	ENSEBUG00000016780	prdm12b	76	67.930	Eptatretus_burgeri
ENSPNAG00000024532	prdm12b	94	87.032	ENSEASG00005008472	PRDM12	99	83.424	Equus_asinus_asinus
ENSPNAG00000024532	prdm12b	94	86.744	ENSECAG00000005933	PRDM12	99	83.152	Equus_caballus
ENSPNAG00000024532	prdm12b	100	87.332	ENSELUG00000009905	prdm12b	100	87.332	Esox_lucius
ENSPNAG00000024532	prdm12b	100	80.978	ENSELUG00000013674	PRDM12	100	80.688	Esox_lucius
ENSPNAG00000024532	prdm12b	91	88.922	ENSFCAG00000043086	PRDM12	99	83.424	Felis_catus
ENSPNAG00000024532	prdm12b	100	86.685	ENSFALG00000001445	PRDM12	89	85.054	Ficedula_albicollis
ENSPNAG00000024532	prdm12b	100	82.400	ENSFHEG00000003944	prdm12b	100	82.667	Fundulus_heteroclitus
ENSPNAG00000024532	prdm12b	100	78.987	ENSFHEG00000007746	-	100	79.592	Fundulus_heteroclitus
ENSPNAG00000024532	prdm12b	100	83.646	ENSGMOG00000011797	prdm12b	100	81.167	Gadus_morhua
ENSPNAG00000024532	prdm12b	100	86.685	ENSGALG00000003895	PRDM12	99	85.054	Gallus_gallus
ENSPNAG00000024532	prdm12b	100	82.713	ENSGAFG00000010827	prdm12b	99	83.245	Gambusia_affinis
ENSPNAG00000024532	prdm12b	100	83.110	ENSGACG00000016713	prdm12b	99	82.210	Gasterosteus_aculeatus
ENSPNAG00000024532	prdm12b	100	86.413	ENSGAGG00000014083	PRDM12	99	85.054	Gopherus_agassizii
ENSPNAG00000024532	prdm12b	90	88.253	ENSGGOG00000010568	PRDM12	99	81.501	Gorilla_gorilla
ENSPNAG00000024532	prdm12b	100	79.949	ENSHBUG00000022537	-	93	79.188	Haplochromis_burtoni
ENSPNAG00000024532	prdm12b	100	83.820	ENSHBUG00000022878	prdm12b	100	83.554	Haplochromis_burtoni
ENSPNAG00000024532	prdm12b	91	88.024	ENSHGLG00000013939	PRDM12	99	82.162	Heterocephalus_glaber_female
ENSPNAG00000024532	prdm12b	100	74.536	ENSHCOG00000021167	-	100	73.740	Hippocampus_comes
ENSPNAG00000024532	prdm12b	90	83.041	ENSHCOG00000003663	prdm12b	100	75.765	Hippocampus_comes
ENSPNAG00000024532	prdm12b	100	94.837	ENSIPUG00000017053	prdm12b	100	94.837	Ictalurus_punctatus
ENSPNAG00000024532	prdm12b	100	79.675	ENSIPUG00000019544	PRDM12	100	79.675	Ictalurus_punctatus
ENSPNAG00000024532	prdm12b	97	85.955	ENSSTOG00000005986	PRDM12	86	88.922	Ictidomys_tridecemlineatus
ENSPNAG00000024532	prdm12b	91	88.922	ENSJJAG00000005424	Prdm12	99	88.922	Jaculus_jaculus
ENSPNAG00000024532	prdm12b	100	77.228	ENSKMAG00000016921	prdm12b	100	76.733	Kryptolebias_marmoratus
ENSPNAG00000024532	prdm12b	99	78.976	ENSKMAG00000021205	-	99	78.976	Kryptolebias_marmoratus
ENSPNAG00000024532	prdm12b	100	83.598	ENSLBEG00000017769	prdm12b	100	82.275	Labrus_bergylta
ENSPNAG00000024532	prdm12b	100	80.526	ENSLBEG00000007776	-	100	81.579	Labrus_bergylta
ENSPNAG00000024532	prdm12b	100	85.598	ENSLACG00000017560	PRDM12	99	84.783	Latimeria_chalumnae
ENSPNAG00000024532	prdm12b	100	86.685	ENSLOCG00000005429	prdm12b	99	87.500	Lepisosteus_oculatus
ENSPNAG00000024532	prdm12b	91	87.353	ENSLAFG00000006979	PRDM12	90	87.316	Loxodonta_africana
ENSPNAG00000024532	prdm12b	91	88.323	ENSMFAG00000040322	PRDM12	89	88.323	Macaca_fascicularis
ENSPNAG00000024532	prdm12b	91	88.323	ENSMNEG00000037234	PRDM12	99	82.880	Macaca_nemestrina
ENSPNAG00000024532	prdm12b	100	83.733	ENSMAMG00000013212	prdm12b	100	83.733	Mastacembelus_armatus
ENSPNAG00000024532	prdm12b	100	77.665	ENSMAMG00000018988	-	100	77.157	Mastacembelus_armatus
ENSPNAG00000024532	prdm12b	100	79.545	ENSMZEG00005000415	PRDM12	100	78.283	Maylandia_zebra
ENSPNAG00000024532	prdm12b	98	86.464	ENSMGAG00000005438	PRDM12	98	84.807	Meleagris_gallopavo
ENSPNAG00000024532	prdm12b	100	82.322	ENSMAUG00000013040	Prdm12	99	82.306	Mesocricetus_auratus
ENSPNAG00000024532	prdm12b	94	87.320	ENSMICG00000015480	PRDM12	99	83.152	Microcebus_murinus
ENSPNAG00000024532	prdm12b	97	85.319	ENSMOCG00000021026	Prdm12	90	89.222	Microtus_ochrogaster
ENSPNAG00000024532	prdm12b	100	86.179	ENSMODG00000012108	PRDM12	99	84.553	Monodelphis_domestica
ENSPNAG00000024532	prdm12b	100	71.582	ENSMALG00000021901	prdm12b	99	70.889	Monopterus_albus
ENSPNAG00000024532	prdm12b	91	88.623	MGP_CAROLIEiJ_G0023414	Prdm12	99	82.306	Mus_caroli
ENSPNAG00000024532	prdm12b	91	88.623	ENSMUSG00000079466	Prdm12	99	82.306	Mus_musculus
ENSPNAG00000024532	prdm12b	91	88.623	MGP_PahariEiJ_G0024871	Prdm12	99	82.306	Mus_pahari
ENSPNAG00000024532	prdm12b	91	88.623	MGP_SPRETEiJ_G0024331	Prdm12	99	82.306	Mus_spretus
ENSPNAG00000024532	prdm12b	90	88.554	ENSNGAG00000018480	Prdm12	99	82.337	Nannospalax_galili
ENSPNAG00000024532	prdm12b	100	82.895	ENSNBRG00000006727	prdm12b	100	82.895	Neolamprologus_brichardi
ENSPNAG00000024532	prdm12b	100	75.397	ENSNBRG00000024312	-	100	75.661	Neolamprologus_brichardi
ENSPNAG00000024532	prdm12b	100	76.965	ENSMEUG00000003828	PRDM12	99	75.339	Notamacropus_eugenii
ENSPNAG00000024532	prdm12b	91	88.024	ENSOPRG00000008680	PRDM12	99	88.024	Ochotona_princeps
ENSPNAG00000024532	prdm12b	94	86.744	ENSODEG00000016282	PRDM12	62	88.623	Octodon_degus
ENSPNAG00000024532	prdm12b	63	84.914	ENSOANG00000001043	PRDM12	100	82.328	Ornithorhynchus_anatinus
ENSPNAG00000024532	prdm12b	84	86.129	ENSOCUG00000008241	PRDM12	97	86.129	Oryctolagus_cuniculus
ENSPNAG00000024532	prdm12b	100	78.718	ENSORLG00000017558	-	100	79.744	Oryzias_latipes
ENSPNAG00000024532	prdm12b	100	81.579	ENSORLG00000007114	prdm12b	99	81.266	Oryzias_latipes
ENSPNAG00000024532	prdm12b	100	81.842	ENSORLG00020019565	prdm12b	99	81.842	Oryzias_latipes_hni
ENSPNAG00000024532	prdm12b	100	78.517	ENSORLG00020013167	-	100	79.540	Oryzias_latipes_hni
ENSPNAG00000024532	prdm12b	100	81.266	ENSORLG00015007621	prdm12b	99	81.266	Oryzias_latipes_hsok
ENSPNAG00000024532	prdm12b	100	78.718	ENSORLG00015003435	-	100	79.744	Oryzias_latipes_hsok
ENSPNAG00000024532	prdm12b	100	78.756	ENSOMEG00000007762	-	100	78.788	Oryzias_melastigma
ENSPNAG00000024532	prdm12b	100	81.152	ENSOMEG00000004134	prdm12b	99	81.414	Oryzias_melastigma
ENSPNAG00000024532	prdm12b	91	88.922	ENSOGAG00000007557	PRDM12	98	88.922	Otolemur_garnettii
ENSPNAG00000024532	prdm12b	79	86.644	ENSPPAG00000031506	-	99	85.235	Pan_paniscus
ENSPNAG00000024532	prdm12b	100	76.676	ENSPPRG00000023024	PRDM12	84	81.194	Panthera_pardus
ENSPNAG00000024532	prdm12b	90	88.554	ENSPTRG00000021475	PRDM12	99	81.769	Pan_troglodytes
ENSPNAG00000024532	prdm12b	90	88.554	ENSPTRG00000043324	-	99	81.769	Pan_troglodytes
ENSPNAG00000024532	prdm12b	91	88.323	ENSPANG00000025967	PRDM12	99	82.880	Papio_anubis
ENSPNAG00000024532	prdm12b	94	79.539	ENSPKIG00000004305	PRDM12	94	82.424	Paramormyrops_kingsleyae
ENSPNAG00000024532	prdm12b	100	89.008	ENSPKIG00000007228	prdm12b	100	87.936	Paramormyrops_kingsleyae
ENSPNAG00000024532	prdm12b	100	85.326	ENSPSIG00000006739	PRDM12	99	84.239	Pelodiscus_sinensis
ENSPNAG00000024532	prdm12b	100	83.019	ENSPMGG00000008867	prdm12b	99	83.288	Periophthalmus_magnuspinnatus
ENSPNAG00000024532	prdm12b	100	76.864	ENSPMGG00000002356	-	100	77.378	Periophthalmus_magnuspinnatus
ENSPNAG00000024532	prdm12b	91	88.922	ENSPEMG00000009969	Prdm12	90	88.922	Peromyscus_maniculatus_bairdii
ENSPNAG00000024532	prdm12b	100	86.179	ENSPCIG00000024119	PRDM12	99	84.553	Phascolarctos_cinereus
ENSPNAG00000024532	prdm12b	100	82.888	ENSPFOG00000019841	prdm12b	100	82.353	Poecilia_formosa
ENSPNAG00000024532	prdm12b	100	81.794	ENSPLAG00000016626	prdm12b	99	82.322	Poecilia_latipinna
ENSPNAG00000024532	prdm12b	96	81.918	ENSPMEG00000016698	prdm12b	99	82.466	Poecilia_mexicana
ENSPNAG00000024532	prdm12b	97	76.022	ENSPREG00000003211	-	96	74.797	Poecilia_reticulata
ENSPNAG00000024532	prdm12b	100	81.842	ENSPREG00000015073	prdm12b	99	82.632	Poecilia_reticulata
ENSPNAG00000024532	prdm12b	90	88.589	ENSPPYG00000019694	PRDM12	93	88.589	Pongo_abelii
ENSPNAG00000024532	prdm12b	91	88.922	ENSPCOG00000022255	PRDM12	99	82.842	Propithecus_coquereli
ENSPNAG00000024532	prdm12b	91	88.623	ENSPVAG00000001511	PRDM12	99	82.038	Pteropus_vampyrus
ENSPNAG00000024532	prdm12b	100	79.545	ENSPNYG00000013589	-	100	78.283	Pundamilia_nyererei
ENSPNAG00000024532	prdm12b	100	83.113	ENSPNYG00000009607	prdm12b	100	82.850	Pundamilia_nyererei
ENSPNAG00000024532	prdm12b	91	88.623	ENSRNOG00000009218	Prdm12	99	82.306	Rattus_norvegicus
ENSPNAG00000024532	prdm12b	88	88.199	ENSRBIG00000042712	PRDM12	88	87.423	Rhinopithecus_bieti
ENSPNAG00000024532	prdm12b	89	88.344	ENSRROG00000043554	PRDM12	99	88.344	Rhinopithecus_roxellana
ENSPNAG00000024532	prdm12b	100	85.676	ENSSHAG00000015972	PRDM12	99	84.054	Sarcophilus_harrisii
ENSPNAG00000024532	prdm12b	100	78.406	ENSSMAG00000003754	prdm12b	100	79.434	Scophthalmus_maximus
ENSPNAG00000024532	prdm12b	100	81.984	ENSSDUG00000019071	-	100	81.984	Seriola_dumerili
ENSPNAG00000024532	prdm12b	100	82.383	ENSSDUG00000023498	prdm12b	100	81.771	Seriola_dumerili
ENSPNAG00000024532	prdm12b	100	82.507	ENSSLDG00000009557	prdm12b	100	81.890	Seriola_lalandi_dorsalis
ENSPNAG00000024532	prdm12b	100	81.843	ENSSLDG00000013562	-	100	81.572	Seriola_lalandi_dorsalis
ENSPNAG00000024532	prdm12b	100	85.870	ENSSPUG00000013424	PRDM12	99	84.511	Sphenodon_punctatus
ENSPNAG00000024532	prdm12b	100	82.677	ENSSPAG00000018824	prdm12b	100	82.677	Stegastes_partitus
ENSPNAG00000024532	prdm12b	100	72.610	ENSSPAG00000022420	-	100	74.160	Stegastes_partitus
ENSPNAG00000024532	prdm12b	91	88.922	ENSSSCG00000005703	PRDM12	99	82.574	Sus_scrofa
ENSPNAG00000024532	prdm12b	100	82.306	ENSTRUG00000018659	prdm12b	100	82.210	Takifugu_rubripes
ENSPNAG00000024532	prdm12b	100	79.784	ENSTRUG00000013239	-	100	79.784	Takifugu_rubripes
ENSPNAG00000024532	prdm12b	100	81.769	ENSTNIG00000009020	prdm12b	99	82.210	Tetraodon_nigroviridis
ENSPNAG00000024532	prdm12b	100	77.151	ENSTNIG00000005859	-	99	76.676	Tetraodon_nigroviridis
ENSPNAG00000024532	prdm12b	91	88.922	ENSUAMG00000009653	PRDM12	91	88.922	Ursus_americanus
ENSPNAG00000024532	prdm12b	91	88.922	ENSVVUG00000027662	PRDM12	78	88.922	Vulpes_vulpes
ENSPNAG00000024532	prdm12b	100	83.690	ENSXCOG00000002836	prdm12b	99	83.690	Xiphophorus_couchianus
ENSPNAG00000024532	prdm12b	100	83.200	ENSXMAG00000005537	prdm12b	100	83.200	Xiphophorus_maculatus
ENSPNAG00000024532	prdm12b	100	78.663	ENSXMAG00000028012	-	100	78.920	Xiphophorus_maculatus