EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000024825 (Gene tree)
Gene ID: 108430522
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 9047 bases
Position: chrKV575374.1:2775107-2784153
Accession: 108430522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000018392	RNase_H2-Ydr279	PF09468.10	2.7e-13	1	1
ENSPNAP00000035081	RNase_H2-Ydr279	PF09468.10	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000038951	-	1324	XM_017703065	ENSPNAP00000035081	307 (aa)	XP_017558554	UPI0008147071
ENSPNAT00000038945	-	1246	-	ENSPNAP00000018392	281 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000024825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000024825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000024825	rnaseh2b	88	51.852	ENSG00000136104	RNASEH2B	96	59.551	Homo_sapiens
ENSPNAG00000024825	rnaseh2b	99	69.608	ENSAPOG00000010496	rnaseh2b	99	69.608	Acanthochromis_polyacanthus
ENSPNAG00000024825	rnaseh2b	87	50.000	ENSAMEG00000012040	RNASEH2B	92	50.000	Ailuropoda_melanoleuca
ENSPNAG00000024825	rnaseh2b	99	59.477	ENSACIG00000021991	rnaseh2b	99	64.706	Amphilophus_citrinellus
ENSPNAG00000024825	rnaseh2b	99	69.608	ENSAOCG00000013398	rnaseh2b	99	69.608	Amphiprion_ocellaris
ENSPNAG00000024825	rnaseh2b	99	69.281	ENSAPEG00000006033	rnaseh2b	99	69.281	Amphiprion_percula
ENSPNAG00000024825	rnaseh2b	99	70.261	ENSATEG00000008370	rnaseh2b	99	70.261	Anabas_testudineus
ENSPNAG00000024825	rnaseh2b	83	59.922	ENSAPLG00000008955	RNASEH2B	99	59.926	Anas_platyrhynchos
ENSPNAG00000024825	rnaseh2b	93	51.557	ENSACAG00000011679	RNASEH2B	97	51.557	Anolis_carolinensis
ENSPNAG00000024825	rnaseh2b	88	51.481	ENSANAG00000020662	RNASEH2B	87	51.481	Aotus_nancymaae
ENSPNAG00000024825	rnaseh2b	99	68.301	ENSACLG00000000467	rnaseh2b	99	68.301	Astatotilapia_calliptera
ENSPNAG00000024825	rnaseh2b	100	85.016	ENSAMXG00000014351	rnaseh2b	100	85.016	Astyanax_mexicanus
ENSPNAG00000024825	rnaseh2b	86	51.111	ENSBTAG00000020149	RNASEH2B	87	51.111	Bos_taurus
ENSPNAG00000024825	rnaseh2b	87	51.685	ENSCJAG00000008585	-	88	51.685	Callithrix_jacchus
ENSPNAG00000024825	rnaseh2b	81	44.053	ENSCJAG00000003822	-	83	44.053	Callithrix_jacchus
ENSPNAG00000024825	rnaseh2b	88	49.630	ENSCAFG00000004295	RNASEH2B	88	49.630	Canis_familiaris
ENSPNAG00000024825	rnaseh2b	88	48.889	ENSCAFG00020000250	RNASEH2B	88	50.000	Canis_lupus_dingo
ENSPNAG00000024825	rnaseh2b	75	46.552	ENSCHIG00000012982	-	82	46.552	Capra_hircus
ENSPNAG00000024825	rnaseh2b	86	51.311	ENSCHIG00000018220	RNASEH2B	87	51.311	Capra_hircus
ENSPNAG00000024825	rnaseh2b	88	49.630	ENSTSYG00000009176	-	88	49.630	Carlito_syrichta
ENSPNAG00000024825	rnaseh2b	86	45.489	ENSTSYG00000031177	-	86	45.489	Carlito_syrichta
ENSPNAG00000024825	rnaseh2b	88	44.444	ENSCAPG00000009978	RNASEH2B	91	44.815	Cavia_aperea
ENSPNAG00000024825	rnaseh2b	88	49.446	ENSCPOG00000032527	RNASEH2B	87	49.446	Cavia_porcellus
ENSPNAG00000024825	rnaseh2b	88	51.111	ENSCCAG00000026979	RNASEH2B	88	51.311	Cebus_capucinus
ENSPNAG00000024825	rnaseh2b	84	52.308	ENSCATG00000031336	RNASEH2B	73	52.308	Cercocebus_atys
ENSPNAG00000024825	rnaseh2b	87	51.301	ENSCLAG00000003517	RNASEH2B	74	51.301	Chinchilla_lanigera
ENSPNAG00000024825	rnaseh2b	88	50.177	ENSCSAG00000017701	RNASEH2B	86	50.177	Chlorocebus_sabaeus
ENSPNAG00000024825	rnaseh2b	70	53.378	ENSCHOG00000013688	RNASEH2B	89	44.526	Choloepus_hoffmanni
ENSPNAG00000024825	rnaseh2b	99	54.870	ENSCPBG00000008684	RNASEH2B	95	54.870	Chrysemys_picta_bellii
ENSPNAG00000024825	rnaseh2b	87	36.170	ENSCING00000016454	-	90	36.170	Ciona_intestinalis
ENSPNAG00000024825	rnaseh2b	88	51.282	ENSCANG00000041511	-	87	51.282	Colobus_angolensis_palliatus
ENSPNAG00000024825	rnaseh2b	87	50.929	ENSCGRG00001000611	Rnaseh2b	87	51.111	Cricetulus_griseus_chok1gshd
ENSPNAG00000024825	rnaseh2b	87	50.929	ENSCGRG00000006077	Rnaseh2b	87	51.111	Cricetulus_griseus_crigri
ENSPNAG00000024825	rnaseh2b	99	70.492	ENSCSEG00000004910	rnaseh2b	99	70.492	Cynoglossus_semilaevis
ENSPNAG00000024825	rnaseh2b	99	69.281	ENSCVAG00000005212	rnaseh2b	99	69.281	Cyprinodon_variegatus
ENSPNAG00000024825	rnaseh2b	100	76.547	ENSDARG00000005128	rnaseh2b	100	76.547	Danio_rerio
ENSPNAG00000024825	rnaseh2b	87	49.259	ENSDNOG00000049666	-	87	49.259	Dasypus_novemcinctus
ENSPNAG00000024825	rnaseh2b	86	48.134	ENSDNOG00000034290	-	86	48.134	Dasypus_novemcinctus
ENSPNAG00000024825	rnaseh2b	88	50.741	ENSDORG00000010708	Rnaseh2b	87	50.741	Dipodomys_ordii
ENSPNAG00000024825	rnaseh2b	88	30.033	FBgn0030507	CG11164	88	30.033	Drosophila_melanogaster
ENSPNAG00000024825	rnaseh2b	84	40.310	ENSEBUG00000005965	rnaseh2b	98	40.310	Eptatretus_burgeri
ENSPNAG00000024825	rnaseh2b	87	51.292	ENSEASG00005017323	RNASEH2B	87	51.292	Equus_asinus_asinus
ENSPNAG00000024825	rnaseh2b	87	51.661	ENSECAG00000014262	RNASEH2B	87	51.661	Equus_caballus
ENSPNAG00000024825	rnaseh2b	99	72.222	ENSELUG00000019560	rnaseh2b	99	72.222	Esox_lucius
ENSPNAG00000024825	rnaseh2b	84	49.615	ENSFCAG00000014257	RNASEH2B	81	49.615	Felis_catus
ENSPNAG00000024825	rnaseh2b	93	57.639	ENSFALG00000008435	RNASEH2B	98	57.639	Ficedula_albicollis
ENSPNAG00000024825	rnaseh2b	88	49.259	ENSFDAG00000009920	RNASEH2B	94	49.259	Fukomys_damarensis
ENSPNAG00000024825	rnaseh2b	99	69.608	ENSFHEG00000012160	rnaseh2b	99	69.608	Fundulus_heteroclitus
ENSPNAG00000024825	rnaseh2b	99	62.500	ENSGMOG00000016830	rnaseh2b	99	62.500	Gadus_morhua
ENSPNAG00000024825	rnaseh2b	95	56.463	ENSGALG00000017015	RNASEH2B	100	56.634	Gallus_gallus
ENSPNAG00000024825	rnaseh2b	99	67.320	ENSGAFG00000021222	rnaseh2b	99	67.320	Gambusia_affinis
ENSPNAG00000024825	rnaseh2b	99	66.987	ENSGACG00000002821	rnaseh2b	99	66.987	Gasterosteus_aculeatus
ENSPNAG00000024825	rnaseh2b	90	57.401	ENSGAGG00000014722	RNASEH2B	99	57.401	Gopherus_agassizii
ENSPNAG00000024825	rnaseh2b	88	51.282	ENSGGOG00000001044	RNASEH2B	87	51.282	Gorilla_gorilla
ENSPNAG00000024825	rnaseh2b	99	68.954	ENSHBUG00000006049	rnaseh2b	99	68.954	Haplochromis_burtoni
ENSPNAG00000024825	rnaseh2b	88	50.370	ENSHGLG00100015953	RNASEH2B	92	50.370	Heterocephalus_glaber_male
ENSPNAG00000024825	rnaseh2b	99	63.636	ENSHCOG00000003318	rnaseh2b	99	63.636	Hippocampus_comes
ENSPNAG00000024825	rnaseh2b	99	85.574	ENSIPUG00000023815	rnaseh2b	99	85.574	Ictalurus_punctatus
ENSPNAG00000024825	rnaseh2b	86	52.256	ENSSTOG00000015126	RNASEH2B	91	52.256	Ictidomys_tridecemlineatus
ENSPNAG00000024825	rnaseh2b	89	49.817	ENSJJAG00000013335	Rnaseh2b	92	49.817	Jaculus_jaculus
ENSPNAG00000024825	rnaseh2b	99	68.627	ENSKMAG00000002198	rnaseh2b	99	68.627	Kryptolebias_marmoratus
ENSPNAG00000024825	rnaseh2b	99	69.836	ENSLBEG00000019331	rnaseh2b	99	69.836	Labrus_bergylta
ENSPNAG00000024825	rnaseh2b	68	59.906	ENSLACG00000010782	RNASEH2B	91	59.912	Latimeria_chalumnae
ENSPNAG00000024825	rnaseh2b	99	65.686	ENSLOCG00000009296	rnaseh2b	99	65.686	Lepisosteus_oculatus
ENSPNAG00000024825	rnaseh2b	88	49.259	ENSLAFG00000030158	RNASEH2B	87	49.259	Loxodonta_africana
ENSPNAG00000024825	rnaseh2b	87	52.045	ENSMFAG00000038464	-	87	52.045	Macaca_fascicularis
ENSPNAG00000024825	rnaseh2b	87	49.071	ENSMMUG00000021746	RNASEH2B	85	49.071	Macaca_mulatta
ENSPNAG00000024825	rnaseh2b	87	52.045	ENSMNEG00000030580	RNASEH2B	87	52.045	Macaca_nemestrina
ENSPNAG00000024825	rnaseh2b	87	51.471	ENSMLEG00000043911	-	87	51.471	Mandrillus_leucophaeus
ENSPNAG00000024825	rnaseh2b	99	68.954	ENSMAMG00000017109	rnaseh2b	99	68.954	Mastacembelus_armatus
ENSPNAG00000024825	rnaseh2b	99	63.725	ENSMZEG00005021926	rnaseh2b	99	65.033	Maylandia_zebra
ENSPNAG00000024825	rnaseh2b	88	57.509	ENSMGAG00000015025	RNASEH2B	100	57.639	Meleagris_gallopavo
ENSPNAG00000024825	rnaseh2b	87	49.814	ENSMAUG00000016520	Rnaseh2b	87	50.370	Mesocricetus_auratus
ENSPNAG00000024825	rnaseh2b	87	50.923	ENSMICG00000000528	RNASEH2B	87	50.923	Microcebus_murinus
ENSPNAG00000024825	rnaseh2b	99	67.320	ENSMMOG00000019799	rnaseh2b	100	71.429	Mola_mola
ENSPNAG00000024825	rnaseh2b	98	51.485	ENSMODG00000010775	RNASEH2B	99	51.485	Monodelphis_domestica
ENSPNAG00000024825	rnaseh2b	99	69.935	ENSMALG00000004463	rnaseh2b	100	69.935	Monopterus_albus
ENSPNAG00000024825	rnaseh2b	72	52.018	MGP_CAROLIEiJ_G0019389	Rnaseh2b	82	53.363	Mus_caroli
ENSPNAG00000024825	rnaseh2b	87	51.301	ENSMUSG00000021932	Rnaseh2b	87	51.301	Mus_musculus
ENSPNAG00000024825	rnaseh2b	87	40.385	MGP_PahariEiJ_G0030407	-	89	40.385	Mus_pahari
ENSPNAG00000024825	rnaseh2b	78	45.662	ENSMPUG00000018010	RNASEH2B	89	45.662	Mustela_putorius_furo
ENSPNAG00000024825	rnaseh2b	88	52.206	ENSMLUG00000004065	-	87	52.206	Myotis_lucifugus
ENSPNAG00000024825	rnaseh2b	99	69.281	ENSNBRG00000003253	rnaseh2b	99	69.281	Neolamprologus_brichardi
ENSPNAG00000024825	rnaseh2b	88	51.282	ENSNLEG00000003804	RNASEH2B	87	51.282	Nomascus_leucogenys
ENSPNAG00000024825	rnaseh2b	89	53.597	ENSMEUG00000003665	RNASEH2B	95	53.597	Notamacropus_eugenii
ENSPNAG00000024825	rnaseh2b	52	49.068	ENSOPRG00000003695	-	51	51.534	Ochotona_princeps
ENSPNAG00000024825	rnaseh2b	69	46.919	ENSODEG00000005412	-	87	46.919	Octodon_degus
ENSPNAG00000024825	rnaseh2b	94	50.000	ENSODEG00000006793	-	94	50.000	Octodon_degus
ENSPNAG00000024825	rnaseh2b	99	68.301	ENSONIG00000006657	rnaseh2b	99	68.301	Oreochromis_niloticus
ENSPNAG00000024825	rnaseh2b	91	54.737	ENSOANG00000015537	RNASEH2B	98	54.737	Ornithorhynchus_anatinus
ENSPNAG00000024825	rnaseh2b	88	49.815	ENSOCUG00000008904	RNASEH2B	85	50.923	Oryctolagus_cuniculus
ENSPNAG00000024825	rnaseh2b	99	67.987	ENSORLG00000011850	rnaseh2b	100	67.987	Oryzias_latipes
ENSPNAG00000024825	rnaseh2b	99	68.977	ENSORLG00020012081	rnaseh2b	100	68.977	Oryzias_latipes_hni
ENSPNAG00000024825	rnaseh2b	99	68.977	ENSORLG00015015468	rnaseh2b	100	68.977	Oryzias_latipes_hsok
ENSPNAG00000024825	rnaseh2b	99	69.637	ENSOMEG00000012441	rnaseh2b	100	69.637	Oryzias_melastigma
ENSPNAG00000024825	rnaseh2b	88	52.727	ENSOGAG00000016486	RNASEH2B	91	52.727	Otolemur_garnettii
ENSPNAG00000024825	rnaseh2b	86	51.311	ENSOARG00000008701	RNASEH2B	90	51.311	Ovis_aries
ENSPNAG00000024825	rnaseh2b	88	51.648	ENSPPAG00000026374	RNASEH2B	97	46.460	Pan_paniscus
ENSPNAG00000024825	rnaseh2b	88	48.175	ENSPPRG00000012450	RNASEH2B	89	48.175	Panthera_pardus
ENSPNAG00000024825	rnaseh2b	88	48.540	ENSPTIG00000013918	RNASEH2B	98	48.540	Panthera_tigris_altaica
ENSPNAG00000024825	rnaseh2b	88	51.282	ENSPTRG00000005886	RNASEH2B	96	51.587	Pan_troglodytes
ENSPNAG00000024825	rnaseh2b	87	51.471	ENSPANG00000022424	-	87	51.471	Papio_anubis
ENSPNAG00000024825	rnaseh2b	99	69.508	ENSPKIG00000013386	rnaseh2b	99	69.508	Paramormyrops_kingsleyae
ENSPNAG00000024825	rnaseh2b	63	51.124	ENSPSIG00000002224	RNASEH2B	83	51.124	Pelodiscus_sinensis
ENSPNAG00000024825	rnaseh2b	64	71.939	ENSPMGG00000010299	rnaseh2b	95	71.939	Periophthalmus_magnuspinnatus
ENSPNAG00000024825	rnaseh2b	87	52.045	ENSPEMG00000019721	Rnaseh2b	87	52.768	Peromyscus_maniculatus_bairdii
ENSPNAG00000024825	rnaseh2b	93	50.174	ENSPCIG00000014535	-	96	50.174	Phascolarctos_cinereus
ENSPNAG00000024825	rnaseh2b	99	68.831	ENSPFOG00000016722	rnaseh2b	99	68.831	Poecilia_formosa
ENSPNAG00000024825	rnaseh2b	99	68.954	ENSPLAG00000011755	rnaseh2b	99	68.954	Poecilia_latipinna
ENSPNAG00000024825	rnaseh2b	99	69.281	ENSPMEG00000002721	rnaseh2b	99	69.281	Poecilia_mexicana
ENSPNAG00000024825	rnaseh2b	99	68.954	ENSPREG00000007737	rnaseh2b	99	68.954	Poecilia_reticulata
ENSPNAG00000024825	rnaseh2b	88	51.282	ENSPPYG00000005378	RNASEH2B	87	51.282	Pongo_abelii
ENSPNAG00000024825	rnaseh2b	87	51.471	ENSPCOG00000026623	RNASEH2B	87	51.471	Propithecus_coquereli
ENSPNAG00000024825	rnaseh2b	76	48.936	ENSPVAG00000000508	RNASEH2B	88	48.936	Pteropus_vampyrus
ENSPNAG00000024825	rnaseh2b	99	68.627	ENSPNYG00000013552	rnaseh2b	99	68.627	Pundamilia_nyererei
ENSPNAG00000024825	rnaseh2b	87	50.923	ENSRNOG00000009192	Rnaseh2b	87	50.923	Rattus_norvegicus
ENSPNAG00000024825	rnaseh2b	85	47.148	ENSRBIG00000036017	-	86	47.148	Rhinopithecus_bieti
ENSPNAG00000024825	rnaseh2b	88	51.481	ENSRBIG00000028928	-	87	51.481	Rhinopithecus_bieti
ENSPNAG00000024825	rnaseh2b	88	51.481	ENSRROG00000018808	-	87	51.481	Rhinopithecus_roxellana
ENSPNAG00000024825	rnaseh2b	74	42.105	ENSRROG00000044915	-	80	41.784	Rhinopithecus_roxellana
ENSPNAG00000024825	rnaseh2b	88	51.852	ENSSBOG00000008081	RNASEH2B	96	51.852	Saimiri_boliviensis_boliviensis
ENSPNAG00000024825	rnaseh2b	99	54.221	ENSSHAG00000016190	RNASEH2B	100	54.221	Sarcophilus_harrisii
ENSPNAG00000024825	rnaseh2b	99	70.915	ENSSFOG00015010190	rnaseh2b	100	70.915	Scleropages_formosus
ENSPNAG00000024825	rnaseh2b	99	68.627	ENSSMAG00000001546	rnaseh2b	99	68.627	Scophthalmus_maximus
ENSPNAG00000024825	rnaseh2b	99	70.915	ENSSDUG00000007567	rnaseh2b	99	70.915	Seriola_dumerili
ENSPNAG00000024825	rnaseh2b	99	68.404	ENSSLDG00000012485	rnaseh2b	99	68.404	Seriola_lalandi_dorsalis
ENSPNAG00000024825	rnaseh2b	86	51.698	ENSSPUG00000006745	-	95	51.698	Sphenodon_punctatus
ENSPNAG00000024825	rnaseh2b	99	69.281	ENSSPAG00000020926	rnaseh2b	99	69.281	Stegastes_partitus
ENSPNAG00000024825	rnaseh2b	87	50.373	ENSSSCG00000024385	RNASEH2B	96	50.813	Sus_scrofa
ENSPNAG00000024825	rnaseh2b	88	59.926	ENSTGUG00000012104	RNASEH2B	99	59.926	Taeniopygia_guttata
ENSPNAG00000024825	rnaseh2b	100	71.010	ENSTRUG00000015098	rnaseh2b	100	71.010	Takifugu_rubripes
ENSPNAG00000024825	rnaseh2b	99	69.156	ENSTNIG00000013861	rnaseh2b	99	69.156	Tetraodon_nigroviridis
ENSPNAG00000024825	rnaseh2b	86	44.981	ENSTTRG00000010761	RNASEH2B	87	46.296	Tursiops_truncatus
ENSPNAG00000024825	rnaseh2b	87	50.558	ENSUAMG00000022849	RNASEH2B	96	50.558	Ursus_americanus
ENSPNAG00000024825	rnaseh2b	87	49.814	ENSUMAG00000018556	RNASEH2B	96	49.814	Ursus_maritimus
ENSPNAG00000024825	rnaseh2b	86	51.119	ENSVPAG00000005679	RNASEH2B	92	51.119	Vicugna_pacos
ENSPNAG00000024825	rnaseh2b	88	50.370	ENSVVUG00000024015	RNASEH2B	81	51.481	Vulpes_vulpes
ENSPNAG00000024825	rnaseh2b	99	54.221	ENSXETG00000020720	rnaseh2b	100	54.221	Xenopus_tropicalis
ENSPNAG00000024825	rnaseh2b	99	67.427	ENSXCOG00000018732	rnaseh2b	99	67.427	Xiphophorus_couchianus
ENSPNAG00000024825	rnaseh2b	99	69.281	ENSXMAG00000022554	rnaseh2b	99	69.281	Xiphophorus_maculatus