EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000024859 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 10169 bases
Position: chrKV577098.1:40062-50230
Accession: 108415104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000018401	TRM	PF02005.16	2.8e-126	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000038956	-	1701	XM_017688076	ENSPNAP00000018401	566 (aa)	XP_017543565	-

Gene Model

Click here to download ENSPNAG00000024859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000024859's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000024859	trmt1	88	68.815	ENSG00000104907	TRMT1	99	74.211	Homo_sapiens
ENSPNAG00000024859	trmt1	88	68.685	ENSAMEG00000012598	TRMT1	79	68.685	Ailuropoda_melanoleuca
ENSPNAG00000024859	trmt1	99	60.374	ENSACIG00000018680	trmt1	97	59.354	Amphilophus_citrinellus
ENSPNAG00000024859	trmt1	99	67.244	ENSAOCG00000006781	trmt1	94	67.244	Amphiprion_ocellaris
ENSPNAG00000024859	trmt1	99	67.244	ENSAPEG00000007712	trmt1	94	67.244	Amphiprion_percula
ENSPNAG00000024859	trmt1	99	66.875	ENSATEG00000001872	trmt1	94	66.875	Anabas_testudineus
ENSPNAG00000024859	trmt1	96	69.247	ENSACAG00000003825	TRMT1	91	69.247	Anolis_carolinensis
ENSPNAG00000024859	trmt1	88	66.944	ENSANAG00000023016	TRMT1	85	66.944	Aotus_nancymaae
ENSPNAG00000024859	trmt1	94	66.612	ENSACLG00000010073	trmt1	99	66.612	Astatotilapia_calliptera
ENSPNAG00000024859	trmt1	98	88.565	ENSAMXG00000012026	trmt1	87	88.565	Astyanax_mexicanus
ENSPNAG00000024859	trmt1	89	68.399	ENSBTAG00000019325	TRMT1	77	68.399	Bos_taurus
ENSPNAG00000024859	trmt1	79	41.584	WBGene00006613	trm-1	94	41.584	Caenorhabditis_elegans
ENSPNAG00000024859	trmt1	88	66.390	ENSCJAG00000004566	TRMT1	82	66.390	Callithrix_jacchus
ENSPNAG00000024859	trmt1	88	68.476	ENSCAFG00000017070	TRMT1	84	68.476	Canis_familiaris
ENSPNAG00000024859	trmt1	88	68.632	ENSCAFG00020005397	TRMT1	82	68.632	Canis_lupus_dingo
ENSPNAG00000024859	trmt1	89	67.842	ENSCHIG00000013569	TRMT1	81	67.842	Capra_hircus
ENSPNAG00000024859	trmt1	88	65.281	ENSTSYG00000003207	TRMT1	81	65.281	Carlito_syrichta
ENSPNAG00000024859	trmt1	82	65.539	ENSCAPG00000003355	TRMT1	83	65.539	Cavia_aperea
ENSPNAG00000024859	trmt1	88	67.223	ENSCPOG00000011754	TRMT1	81	67.223	Cavia_porcellus
ENSPNAG00000024859	trmt1	88	65.489	ENSCCAG00000022263	TRMT1	86	65.489	Cebus_capucinus
ENSPNAG00000024859	trmt1	88	69.231	ENSCATG00000039850	TRMT1	80	69.231	Cercocebus_atys
ENSPNAG00000024859	trmt1	63	58.630	ENSCATG00000038220	-	65	59.178	Cercocebus_atys
ENSPNAG00000024859	trmt1	88	68.619	ENSCLAG00000015295	TRMT1	82	65.756	Chinchilla_lanigera
ENSPNAG00000024859	trmt1	72	72.895	ENSCSAG00000006500	TRMT1	82	72.895	Chlorocebus_sabaeus
ENSPNAG00000024859	trmt1	83	70.316	ENSCPBG00000023866	TRMT1	71	70.316	Chrysemys_picta_bellii
ENSPNAG00000024859	trmt1	78	50.219	ENSCING00000002884	-	81	50.219	Ciona_intestinalis
ENSPNAG00000024859	trmt1	83	47.556	ENSCSAVG00000010927	-	97	47.556	Ciona_savignyi
ENSPNAG00000024859	trmt1	83	51.255	ENSCANG00000040631	TRMT1	80	55.172	Colobus_angolensis_palliatus
ENSPNAG00000024859	trmt1	83	53.236	ENSCANG00000031650	-	73	53.236	Colobus_angolensis_palliatus
ENSPNAG00000024859	trmt1	88	82.759	ENSCGRG00001022594	Trmt1	77	82.759	Cricetulus_griseus_chok1gshd
ENSPNAG00000024859	trmt1	88	82.759	ENSCGRG00000017732	Trmt1	76	82.759	Cricetulus_griseus_crigri
ENSPNAG00000024859	trmt1	99	66.355	ENSCSEG00000001643	trmt1	93	67.478	Cynoglossus_semilaevis
ENSPNAG00000024859	trmt1	98	68.810	ENSCVAG00000011886	trmt1	93	68.810	Cyprinodon_variegatus
ENSPNAG00000024859	trmt1	99	84.156	ENSDARG00000010978	trmt1	87	84.156	Danio_rerio
ENSPNAG00000024859	trmt1	83	45.010	ENSDNOG00000048240	-	81	45.010	Dasypus_novemcinctus
ENSPNAG00000024859	trmt1	88	66.875	ENSDORG00000014298	Trmt1	80	66.875	Dipodomys_ordii
ENSPNAG00000024859	trmt1	78	47.647	FBgn0032430	CG6388	87	47.647	Drosophila_melanogaster
ENSPNAG00000024859	trmt1	78	54.506	ENSEBUG00000003449	trmt1	75	54.584	Eptatretus_burgeri
ENSPNAG00000024859	trmt1	88	68.267	ENSEASG00005004050	TRMT1	84	68.267	Equus_asinus_asinus
ENSPNAG00000024859	trmt1	88	68.476	ENSECAG00000016149	TRMT1	84	68.476	Equus_caballus
ENSPNAG00000024859	trmt1	69	56.423	ENSEEUG00000014102	-	100	56.423	Erinaceus_europaeus
ENSPNAG00000024859	trmt1	98	65.674	ENSELUG00000021659	trmt1	95	65.674	Esox_lucius
ENSPNAG00000024859	trmt1	88	68.815	ENSFCAG00000000483	TRMT1	81	68.815	Felis_catus
ENSPNAG00000024859	trmt1	88	68.333	ENSFDAG00000007386	TRMT1	80	68.333	Fukomys_damarensis
ENSPNAG00000024859	trmt1	82	71.241	ENSFHEG00000012865	trmt1	88	71.375	Fundulus_heteroclitus
ENSPNAG00000024859	trmt1	83	67.932	ENSGMOG00000006564	trmt1	82	67.932	Gadus_morhua
ENSPNAG00000024859	trmt1	99	67.508	ENSGAFG00000011862	trmt1	96	67.508	Gambusia_affinis
ENSPNAG00000024859	trmt1	89	67.073	ENSGACG00000000227	trmt1	93	67.073	Gasterosteus_aculeatus
ENSPNAG00000024859	trmt1	82	69.703	ENSGAGG00000016432	TRMT1	70	69.703	Gopherus_agassizii
ENSPNAG00000024859	trmt1	88	68.815	ENSGGOG00000014007	TRMT1	81	68.815	Gorilla_gorilla
ENSPNAG00000024859	trmt1	86	68.311	ENSHBUG00000008821	trmt1	92	68.311	Haplochromis_burtoni
ENSPNAG00000024859	trmt1	88	68.894	ENSHGLG00000015972	TRMT1	81	68.894	Heterocephalus_glaber_female
ENSPNAG00000024859	trmt1	88	63.180	ENSHGLG00100018112	TRMT1	80	63.180	Heterocephalus_glaber_male
ENSPNAG00000024859	trmt1	93	66.162	ENSHCOG00000009447	trmt1	92	66.162	Hippocampus_comes
ENSPNAG00000024859	trmt1	98	83.096	ENSIPUG00000002899	trmt1	90	80.897	Ictalurus_punctatus
ENSPNAG00000024859	trmt1	88	68.333	ENSSTOG00000012531	TRMT1	82	68.333	Ictidomys_tridecemlineatus
ENSPNAG00000024859	trmt1	88	68.201	ENSJJAG00000017154	Trmt1	81	68.201	Jaculus_jaculus
ENSPNAG00000024859	trmt1	99	67.925	ENSKMAG00000011809	trmt1	84	78.416	Kryptolebias_marmoratus
ENSPNAG00000024859	trmt1	99	65.517	ENSLBEG00000012703	trmt1	94	65.728	Labrus_bergylta
ENSPNAG00000024859	trmt1	89	61.522	ENSLACG00000014585	TRMT1	87	61.522	Latimeria_chalumnae
ENSPNAG00000024859	trmt1	89	64.298	ENSLOCG00000006479	trmt1	99	64.298	Lepisosteus_oculatus
ENSPNAG00000024859	trmt1	98	68.399	ENSLAFG00000014072	TRMT1	88	68.399	Loxodonta_africana
ENSPNAG00000024859	trmt1	88	68.815	ENSMFAG00000033143	TRMT1	80	68.815	Macaca_fascicularis
ENSPNAG00000024859	trmt1	88	64.286	ENSMMUG00000001167	TRMT1	81	64.286	Macaca_mulatta
ENSPNAG00000024859	trmt1	88	68.815	ENSMNEG00000037867	TRMT1	80	68.815	Macaca_nemestrina
ENSPNAG00000024859	trmt1	88	68.815	ENSMLEG00000016142	TRMT1	81	68.815	Mandrillus_leucophaeus
ENSPNAG00000024859	trmt1	99	67.136	ENSMAMG00000004357	trmt1	94	67.136	Mastacembelus_armatus
ENSPNAG00000024859	trmt1	90	69.019	ENSMZEG00005014510	trmt1	87	69.019	Maylandia_zebra
ENSPNAG00000024859	trmt1	89	66.944	ENSMAUG00000011134	Trmt1	82	66.944	Mesocricetus_auratus
ENSPNAG00000024859	trmt1	88	69.647	ENSMICG00000000793	TRMT1	81	69.647	Microcebus_murinus
ENSPNAG00000024859	trmt1	90	67.432	ENSMOCG00000015895	Trmt1	82	67.432	Microtus_ochrogaster
ENSPNAG00000024859	trmt1	99	66.346	ENSMMOG00000011097	trmt1	99	66.346	Mola_mola
ENSPNAG00000024859	trmt1	90	70.309	ENSMODG00000011619	TRMT1	89	70.309	Monodelphis_domestica
ENSPNAG00000024859	trmt1	97	68.191	MGP_CAROLIEiJ_G0031304	Trmt1	88	68.191	Mus_caroli
ENSPNAG00000024859	trmt1	97	68.399	ENSMUSG00000001909	Trmt1	88	68.399	Mus_musculus
ENSPNAG00000024859	trmt1	90	68.399	MGP_SPRETEiJ_G0032422	Trmt1	82	68.399	Mus_spretus
ENSPNAG00000024859	trmt1	88	68.476	ENSMPUG00000004210	TRMT1	76	68.476	Mustela_putorius_furo
ENSPNAG00000024859	trmt1	89	69.854	ENSMLUG00000012809	TRMT1	80	69.854	Myotis_lucifugus
ENSPNAG00000024859	trmt1	93	67.568	ENSNGAG00000022486	Trmt1	85	67.568	Nannospalax_galili
ENSPNAG00000024859	trmt1	77	79.118	ENSNBRG00000024376	trmt1	87	79.118	Neolamprologus_brichardi
ENSPNAG00000024859	trmt1	67	71.649	ENSNLEG00000013019	-	76	71.649	Nomascus_leucogenys
ENSPNAG00000024859	trmt1	90	70.231	ENSMEUG00000013756	TRMT1	92	70.231	Notamacropus_eugenii
ENSPNAG00000024859	trmt1	82	69.451	ENSOPRG00000009471	-	72	69.451	Ochotona_princeps
ENSPNAG00000024859	trmt1	88	68.201	ENSODEG00000010323	TRMT1	80	68.201	Octodon_degus
ENSPNAG00000024859	trmt1	99	67.559	ENSONIG00000000400	trmt1	91	72.583	Oreochromis_niloticus
ENSPNAG00000024859	trmt1	72	72.895	ENSOCUG00000021934	TRMT1	82	72.895	Oryctolagus_cuniculus
ENSPNAG00000024859	trmt1	91	66.102	ENSORLG00000020074	trmt1	92	66.102	Oryzias_latipes
ENSPNAG00000024859	trmt1	99	65.674	ENSORLG00020007561	trmt1	99	65.506	Oryzias_latipes_hni
ENSPNAG00000024859	trmt1	91	69.402	ENSORLG00015006547	trmt1	88	69.402	Oryzias_latipes_hsok
ENSPNAG00000024859	trmt1	99	65.674	ENSOMEG00000019343	trmt1	95	65.674	Oryzias_melastigma
ENSPNAG00000024859	trmt1	88	68.815	ENSOGAG00000025576	TRMT1	84	68.815	Otolemur_garnettii
ENSPNAG00000024859	trmt1	89	53.542	ENSOARG00000009397	TRMT1	75	52.556	Ovis_aries
ENSPNAG00000024859	trmt1	88	56.667	ENSPPRG00000012117	TRMT1	81	60.960	Panthera_pardus
ENSPNAG00000024859	trmt1	63	73.545	ENSPTIG00000008833	TRMT1	75	73.545	Panthera_tigris_altaica
ENSPNAG00000024859	trmt1	83	54.262	ENSPTRG00000050421	-	74	54.054	Pan_troglodytes
ENSPNAG00000024859	trmt1	88	68.815	ENSPTRG00000010557	TRMT1	81	68.815	Pan_troglodytes
ENSPNAG00000024859	trmt1	88	68.815	ENSPANG00000009247	TRMT1	81	68.815	Papio_anubis
ENSPNAG00000024859	trmt1	63	58.808	ENSPANG00000034058	-	63	59.350	Papio_anubis
ENSPNAG00000024859	trmt1	99	66.718	ENSPKIG00000005309	trmt1	95	66.718	Paramormyrops_kingsleyae
ENSPNAG00000024859	trmt1	84	60.403	ENSPSIG00000008762	TRMT1	72	60.179	Pelodiscus_sinensis
ENSPNAG00000024859	trmt1	92	73.109	ENSPMGG00000019764	trmt1	98	67.101	Periophthalmus_magnuspinnatus
ENSPNAG00000024859	trmt1	90	67.775	ENSPEMG00000016247	Trmt1	81	67.775	Peromyscus_maniculatus_bairdii
ENSPNAG00000024859	trmt1	88	63.502	ENSPMAG00000004329	trmt1	84	63.502	Petromyzon_marinus
ENSPNAG00000024859	trmt1	84	69.897	ENSPCIG00000019273	TRMT1	86	69.897	Phascolarctos_cinereus
ENSPNAG00000024859	trmt1	99	68.254	ENSPFOG00000008527	trmt1	94	69.206	Poecilia_formosa
ENSPNAG00000024859	trmt1	97	68.669	ENSPLAG00000018788	trmt1	95	68.174	Poecilia_latipinna
ENSPNAG00000024859	trmt1	98	68.277	ENSPMEG00000013120	trmt1	94	68.277	Poecilia_mexicana
ENSPNAG00000024859	trmt1	99	67.624	ENSPREG00000000211	trmt1	92	67.624	Poecilia_reticulata
ENSPNAG00000024859	trmt1	88	68.607	ENSPPYG00000009622	TRMT1	81	68.607	Pongo_abelii
ENSPNAG00000024859	trmt1	88	65.208	ENSPCAG00000003698	TRMT1	82	65.208	Procavia_capensis
ENSPNAG00000024859	trmt1	88	68.607	ENSPCOG00000008653	TRMT1	81	68.607	Propithecus_coquereli
ENSPNAG00000024859	trmt1	90	68.815	ENSPVAG00000015076	TRMT1	85	68.815	Pteropus_vampyrus
ENSPNAG00000024859	trmt1	94	64.321	ENSPNYG00000013960	trmt1	99	64.321	Pundamilia_nyererei
ENSPNAG00000024859	trmt1	92	68.191	ENSRNOG00000002914	Trmt1	87	68.191	Rattus_norvegicus
ENSPNAG00000024859	trmt1	83	50.515	ENSRBIG00000037505	-	74	50.515	Rhinopithecus_bieti
ENSPNAG00000024859	trmt1	88	68.815	ENSRBIG00000038324	TRMT1	80	68.815	Rhinopithecus_bieti
ENSPNAG00000024859	trmt1	88	68.815	ENSRROG00000028599	TRMT1	80	68.815	Rhinopithecus_roxellana
ENSPNAG00000024859	trmt1	83	49.896	ENSRROG00000031847	-	73	49.896	Rhinopithecus_roxellana
ENSPNAG00000024859	trmt1	78	68.966	YDR120C	-	82	68.966	Saccharomyces_cerevisiae
ENSPNAG00000024859	trmt1	88	65.353	ENSSBOG00000028861	TRMT1	86	65.353	Saimiri_boliviensis_boliviensis
ENSPNAG00000024859	trmt1	89	71.097	ENSSHAG00000014381	TRMT1	90	70.860	Sarcophilus_harrisii
ENSPNAG00000024859	trmt1	92	69.426	ENSSFOG00015004139	trmt1	95	65.319	Scleropages_formosus
ENSPNAG00000024859	trmt1	99	79.835	ENSSMAG00000021136	trmt1	88	79.835	Scophthalmus_maximus
ENSPNAG00000024859	trmt1	84	80.412	ENSSDUG00000012740	trmt1	71	80.412	Seriola_dumerili
ENSPNAG00000024859	trmt1	84	80.000	ENSSLDG00000005971	trmt1	94	65.571	Seriola_lalandi_dorsalis
ENSPNAG00000024859	trmt1	78	69.451	ENSSARG00000005138	TRMT1	83	69.451	Sorex_araneus
ENSPNAG00000024859	trmt1	92	49.623	ENSSPUG00000001084	TRMT1	93	50.285	Sphenodon_punctatus
ENSPNAG00000024859	trmt1	91	69.573	ENSSPAG00000007153	trmt1	96	69.573	Stegastes_partitus
ENSPNAG00000024859	trmt1	88	68.323	ENSSSCG00000013744	TRMT1	84	68.323	Sus_scrofa
ENSPNAG00000024859	trmt1	89	75.054	ENSTRUG00000010700	trmt1	80	75.054	Takifugu_rubripes
ENSPNAG00000024859	trmt1	90	71.329	ENSTNIG00000018808	trmt1	99	71.329	Tetraodon_nigroviridis
ENSPNAG00000024859	trmt1	88	77.419	ENSTTRG00000006379	TRMT1	78	77.419	Tursiops_truncatus
ENSPNAG00000024859	trmt1	88	68.894	ENSUAMG00000022911	TRMT1	86	67.015	Ursus_americanus
ENSPNAG00000024859	trmt1	88	68.476	ENSUMAG00000006027	TRMT1	84	68.476	Ursus_maritimus
ENSPNAG00000024859	trmt1	88	68.399	ENSVVUG00000024177	TRMT1	81	68.399	Vulpes_vulpes
ENSPNAG00000024859	trmt1	64	71.858	ENSXETG00000033863	TRMT1	72	71.858	Xenopus_tropicalis
ENSPNAG00000024859	trmt1	99	67.937	ENSXCOG00000015733	trmt1	94	68.882	Xiphophorus_couchianus
ENSPNAG00000024859	trmt1	90	71.848	ENSXMAG00000013823	trmt1	99	71.848	Xiphophorus_maculatus