EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000024905 (Gene tree)
Gene ID: 108413865
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 15027 bases
Position: chrKV576618.1:76330-91356
Accession: 108413865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000018402	RRM_1	PF00076.22	5.8e-26	1	2
ENSPNAP00000018402	RRM_1	PF00076.22	5.8e-26	2	2
ENSPNAP00000035117	RRM_1	PF00076.22	9.2e-26	1	2
ENSPNAP00000035117	RRM_1	PF00076.22	9.2e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000027699	-	2770	XM_017686562	ENSPNAP00000035117	306 (aa)	XP_017542051	UPI0008144662
ENSPNAT00000038947	-	795	XM_017686563	ENSPNAP00000018402	264 (aa)	XP_017542052	-

Gene Model

Click here to download ENSPNAG00000024905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000024905's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000024905	trnau1apa	63	30.409	ENSPNAG00000016449	tia1l	52	30.978
ENSPNAG00000024905	trnau1apa	64	30.818	ENSPNAG00000024626	pabpc1b	52	30.818
ENSPNAG00000024905	trnau1apa	67	30.986	ENSPNAG00000003272	tial1	72	30.986
ENSPNAG00000024905	trnau1apa	64	30.189	ENSPNAG00000028408	pabpc1a	62	30.189
ENSPNAG00000024905	trnau1apa	95	39.432	ENSPNAG00000019138	trnau1apb	98	40.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000024905	trnau1apa	91	54.317	ENSG00000180098	TRNAU1AP	95	55.124	Homo_sapiens
ENSPNAG00000024905	trnau1apa	97	52.273	ENSAPOG00000007148	TRNAU1AP	99	52.597	Acanthochromis_polyacanthus
ENSPNAG00000024905	trnau1apa	91	55.036	ENSAMEG00000011367	TRNAU1AP	95	55.477	Ailuropoda_melanoleuca
ENSPNAG00000024905	trnau1apa	88	69.663	ENSACIG00000004161	trnau1apa	93	69.663	Amphilophus_citrinellus
ENSPNAG00000024905	trnau1apa	97	53.268	ENSAOCG00000008056	trnau1apa	99	53.268	Amphiprion_ocellaris
ENSPNAG00000024905	trnau1apa	97	54.849	ENSAPEG00000008868	trnau1apa	99	54.849	Amphiprion_percula
ENSPNAG00000024905	trnau1apa	97	51.411	ENSATEG00000012140	trnau1apa	99	52.848	Anabas_testudineus
ENSPNAG00000024905	trnau1apa	90	52.364	ENSAPLG00000002606	TRNAU1AP	99	53.214	Anas_platyrhynchos
ENSPNAG00000024905	trnau1apa	91	43.617	ENSACAG00000003995	-	96	46.075	Anolis_carolinensis
ENSPNAG00000024905	trnau1apa	67	35.610	ENSACAG00000004205	-	76	34.762	Anolis_carolinensis
ENSPNAG00000024905	trnau1apa	91	54.317	ENSANAG00000018976	TRNAU1AP	95	55.124	Aotus_nancymaae
ENSPNAG00000024905	trnau1apa	97	54.098	ENSACLG00000018515	trnau1apa	99	54.098	Astatotilapia_calliptera
ENSPNAG00000024905	trnau1apa	100	72.727	ENSAMXG00000013750	trnau1apa	100	72.727	Astyanax_mexicanus
ENSPNAG00000024905	trnau1apa	88	63.636	ENSAMXG00000029240	-	94	63.636	Astyanax_mexicanus
ENSPNAG00000024905	trnau1apa	91	54.676	ENSBTAG00000010393	TRNAU1AP	95	55.477	Bos_taurus
ENSPNAG00000024905	trnau1apa	91	54.317	ENSCJAG00000009717	TRNAU1AP	87	69.863	Callithrix_jacchus
ENSPNAG00000024905	trnau1apa	92	54.093	ENSCAFG00000011735	TRNAU1AP	96	54.895	Canis_familiaris
ENSPNAG00000024905	trnau1apa	92	54.093	ENSCAFG00020023584	TRNAU1AP	96	54.895	Canis_lupus_dingo
ENSPNAG00000024905	trnau1apa	91	54.676	ENSCHIG00000023215	TRNAU1AP	95	55.477	Capra_hircus
ENSPNAG00000024905	trnau1apa	91	54.804	ENSTSYG00000003506	TRNAU1AP	87	69.863	Carlito_syrichta
ENSPNAG00000024905	trnau1apa	92	54.093	ENSCPOG00000001925	TRNAU1AP	96	54.895	Cavia_porcellus
ENSPNAG00000024905	trnau1apa	91	54.317	ENSCCAG00000037506	TRNAU1AP	87	69.863	Cebus_capucinus
ENSPNAG00000024905	trnau1apa	91	54.317	ENSCATG00000044617	TRNAU1AP	87	69.863	Cercocebus_atys
ENSPNAG00000024905	trnau1apa	94	53.103	ENSCLAG00000008223	TRNAU1AP	99	53.898	Chinchilla_lanigera
ENSPNAG00000024905	trnau1apa	91	54.317	ENSCSAG00000001014	TRNAU1AP	95	55.124	Chlorocebus_sabaeus
ENSPNAG00000024905	trnau1apa	92	51.064	ENSCPBG00000000121	TRNAU1AP	100	51.916	Chrysemys_picta_bellii
ENSPNAG00000024905	trnau1apa	60	44.654	ENSCSAVG00000011781	-	88	44.910	Ciona_savignyi
ENSPNAG00000024905	trnau1apa	91	44.604	ENSCANG00000041949	TRNAU1AP	93	46.857	Colobus_angolensis_palliatus
ENSPNAG00000024905	trnau1apa	95	52.560	ENSCGRG00001004713	Trnau1ap	99	53.356	Cricetulus_griseus_chok1gshd
ENSPNAG00000024905	trnau1apa	95	52.560	ENSCGRG00000014532	Trnau1ap	99	53.356	Cricetulus_griseus_crigri
ENSPNAG00000024905	trnau1apa	97	52.104	ENSCSEG00000006663	trnau1apa	99	52.104	Cynoglossus_semilaevis
ENSPNAG00000024905	trnau1apa	97	50.485	ENSCVAG00000018069	trnau1apa	99	51.133	Cyprinodon_variegatus
ENSPNAG00000024905	trnau1apa	98	59.076	ENSDARG00000101323	trnau1apa	96	59.076	Danio_rerio
ENSPNAG00000024905	trnau1apa	91	54.317	ENSDNOG00000033009	TRNAU1AP	99	53.020	Dasypus_novemcinctus
ENSPNAG00000024905	trnau1apa	67	53.226	ENSDNOG00000047959	-	96	53.226	Dasypus_novemcinctus
ENSPNAG00000024905	trnau1apa	95	50.680	ENSDORG00000006349	Trnau1ap	99	54.583	Dipodomys_ordii
ENSPNAG00000024905	trnau1apa	63	46.707	FBgn0031607	CG15440	52	46.552	Drosophila_melanogaster
ENSPNAG00000024905	trnau1apa	77	50.633	ENSETEG00000012594	TRNAU1AP	95	51.852	Echinops_telfairi
ENSPNAG00000024905	trnau1apa	91	54.317	ENSEASG00005010062	TRNAU1AP	90	69.863	Equus_asinus_asinus
ENSPNAG00000024905	trnau1apa	91	54.317	ENSECAG00000012980	TRNAU1AP	90	69.863	Equus_caballus
ENSPNAG00000024905	trnau1apa	97	55.484	ENSELUG00000017686	trnau1apa	99	56.026	Esox_lucius
ENSPNAG00000024905	trnau1apa	51	73.626	ENSELUG00000022790	-	96	73.626	Esox_lucius
ENSPNAG00000024905	trnau1apa	91	54.317	ENSFCAG00000013401	TRNAU1AP	95	55.124	Felis_catus
ENSPNAG00000024905	trnau1apa	92	50.355	ENSFALG00000001371	TRNAU1AP	100	51.916	Ficedula_albicollis
ENSPNAG00000024905	trnau1apa	92	54.093	ENSFDAG00000018599	TRNAU1AP	96	54.895	Fukomys_damarensis
ENSPNAG00000024905	trnau1apa	64	65.143	ENSFHEG00000018232	trnau1apa	86	51.362	Fundulus_heteroclitus
ENSPNAG00000024905	trnau1apa	97	46.429	ENSGMOG00000016508	trnau1apa	99	47.742	Gadus_morhua
ENSPNAG00000024905	trnau1apa	95	50.166	ENSGALG00000001310	-	99	52.349	Gallus_gallus
ENSPNAG00000024905	trnau1apa	62	38.049	ENSGALG00000012721	C2H6orf52	84	35.065	Gallus_gallus
ENSPNAG00000024905	trnau1apa	64	67.059	ENSGAFG00000004928	trnau1apa	93	53.036	Gambusia_affinis
ENSPNAG00000024905	trnau1apa	97	53.094	ENSGACG00000001443	trnau1apa	99	53.094	Gasterosteus_aculeatus
ENSPNAG00000024905	trnau1apa	92	49.310	ENSGAGG00000004940	TRNAU1AP	100	52.265	Gopherus_agassizii
ENSPNAG00000024905	trnau1apa	91	54.317	ENSGGOG00000003511	TRNAU1AP	87	69.863	Gorilla_gorilla
ENSPNAG00000024905	trnau1apa	97	53.226	ENSHBUG00000002510	trnau1apa	99	53.226	Haplochromis_burtoni
ENSPNAG00000024905	trnau1apa	94	53.103	ENSHGLG00000010380	TRNAU1AP	99	53.898	Heterocephalus_glaber_female
ENSPNAG00000024905	trnau1apa	94	51.379	ENSHGLG00100012699	TRNAU1AP	99	52.203	Heterocephalus_glaber_male
ENSPNAG00000024905	trnau1apa	97	50.955	ENSHCOG00000014770	trnau1apa	99	50.955	Hippocampus_comes
ENSPNAG00000024905	trnau1apa	91	54.317	ENSSTOG00000000079	TRNAU1AP	95	55.124	Ictidomys_tridecemlineatus
ENSPNAG00000024905	trnau1apa	95	52.901	ENSJJAG00000010128	Trnau1ap	99	54.027	Jaculus_jaculus
ENSPNAG00000024905	trnau1apa	97	52.751	ENSKMAG00000001230	trnau1apa	99	52.258	Kryptolebias_marmoratus
ENSPNAG00000024905	trnau1apa	97	51.282	ENSLBEG00000011683	trnau1apa	99	51.118	Labrus_bergylta
ENSPNAG00000024905	trnau1apa	92	44.326	ENSLACG00000005541	TRNAU1AP	97	46.181	Latimeria_chalumnae
ENSPNAG00000024905	trnau1apa	92	51.546	ENSLOCG00000004041	trnau1apa	97	52.069	Lepisosteus_oculatus
ENSPNAG00000024905	trnau1apa	91	54.317	ENSLAFG00000007628	TRNAU1AP	95	55.124	Loxodonta_africana
ENSPNAG00000024905	trnau1apa	91	54.317	ENSMFAG00000043751	TRNAU1AP	87	69.863	Macaca_fascicularis
ENSPNAG00000024905	trnau1apa	91	54.317	ENSMMUG00000006561	TRNAU1AP	95	55.124	Macaca_mulatta
ENSPNAG00000024905	trnau1apa	91	54.317	ENSMNEG00000044201	TRNAU1AP	87	69.863	Macaca_nemestrina
ENSPNAG00000024905	trnau1apa	91	54.317	ENSMLEG00000015649	TRNAU1AP	87	69.863	Mandrillus_leucophaeus
ENSPNAG00000024905	trnau1apa	97	55.235	ENSMAMG00000001247	trnau1apa	99	56.679	Mastacembelus_armatus
ENSPNAG00000024905	trnau1apa	97	54.098	ENSMZEG00005017722	trnau1apa	99	54.098	Maylandia_zebra
ENSPNAG00000024905	trnau1apa	93	50.699	ENSMGAG00000002105	TRNAU1AP	100	51.203	Meleagris_gallopavo
ENSPNAG00000024905	trnau1apa	91	54.317	ENSMICG00000008386	TRNAU1AP	87	69.863	Microcebus_murinus
ENSPNAG00000024905	trnau1apa	95	52.560	ENSMOCG00000011189	Trnau1ap	99	53.356	Microtus_ochrogaster
ENSPNAG00000024905	trnau1apa	97	47.917	ENSMMOG00000012107	trnau1apa	99	48.789	Mola_mola
ENSPNAG00000024905	trnau1apa	91	54.317	ENSMODG00000010927	TRNAU1AP	95	55.830	Monodelphis_domestica
ENSPNAG00000024905	trnau1apa	97	52.564	ENSMALG00000016778	trnau1apa	99	54.516	Monopterus_albus
ENSPNAG00000024905	trnau1apa	91	54.317	MGP_CAROLIEiJ_G0026563	Trnau1ap	85	69.863	Mus_caroli
ENSPNAG00000024905	trnau1apa	91	54.317	ENSMUSG00000028898	Trnau1ap	85	69.863	Mus_musculus
ENSPNAG00000024905	trnau1apa	91	54.317	MGP_PahariEiJ_G0028896	Trnau1ap	86	69.863	Mus_pahari
ENSPNAG00000024905	trnau1apa	91	54.317	MGP_SPRETEiJ_G0027544	Trnau1ap	85	69.863	Mus_spretus
ENSPNAG00000024905	trnau1apa	91	54.676	ENSMPUG00000015511	TRNAU1AP	95	55.477	Mustela_putorius_furo
ENSPNAG00000024905	trnau1apa	91	54.317	ENSMLUG00000012586	TRNAU1AP	99	53.020	Myotis_lucifugus
ENSPNAG00000024905	trnau1apa	95	52.901	ENSNGAG00000015881	Trnau1ap	99	53.356	Nannospalax_galili
ENSPNAG00000024905	trnau1apa	97	48.311	ENSNBRG00000001758	trnau1apa	99	48.649	Neolamprologus_brichardi
ENSPNAG00000024905	trnau1apa	91	54.317	ENSNLEG00000009822	TRNAU1AP	87	69.863	Nomascus_leucogenys
ENSPNAG00000024905	trnau1apa	88	53.137	ENSMEUG00000006117	TRNAU1AP	96	54.710	Notamacropus_eugenii
ENSPNAG00000024905	trnau1apa	56	63.218	ENSOPRG00000007084	-	65	63.218	Ochotona_princeps
ENSPNAG00000024905	trnau1apa	94	53.103	ENSODEG00000002970	TRNAU1AP	99	53.898	Octodon_degus
ENSPNAG00000024905	trnau1apa	77	52.653	ENSONIG00000004715	trnau1apa	97	52.653	Oreochromis_niloticus
ENSPNAG00000024905	trnau1apa	91	43.214	ENSOANG00000005325	-	96	44.561	Ornithorhynchus_anatinus
ENSPNAG00000024905	trnau1apa	82	43.969	ENSOCUG00000006834	-	97	43.969	Oryctolagus_cuniculus
ENSPNAG00000024905	trnau1apa	91	47.872	ENSOCUG00000002353	-	95	47.872	Oryctolagus_cuniculus
ENSPNAG00000024905	trnau1apa	91	53.237	ENSOCUG00000011704	-	95	53.125	Oryctolagus_cuniculus
ENSPNAG00000024905	trnau1apa	97	54.064	ENSORLG00000010428	trnau1apa	99	54.064	Oryzias_latipes
ENSPNAG00000024905	trnau1apa	97	50.162	ENSORLG00020000926	trnau1ap	99	51.125	Oryzias_latipes_hni
ENSPNAG00000024905	trnau1apa	97	50.162	ENSORLG00015009858	trnau1ap	99	51.125	Oryzias_latipes_hsok
ENSPNAG00000024905	trnau1apa	97	52.427	ENSOMEG00000007873	trnau1apa	99	54.045	Oryzias_melastigma
ENSPNAG00000024905	trnau1apa	91	54.317	ENSOGAG00000002274	TRNAU1AP	95	55.124	Otolemur_garnettii
ENSPNAG00000024905	trnau1apa	91	54.676	ENSOARG00000002843	TRNAU1AP	95	55.477	Ovis_aries
ENSPNAG00000024905	trnau1apa	91	54.317	ENSPPAG00000033927	TRNAU1AP	87	69.863	Pan_paniscus
ENSPNAG00000024905	trnau1apa	91	54.317	ENSPPRG00000004416	TRNAU1AP	95	55.124	Panthera_pardus
ENSPNAG00000024905	trnau1apa	91	54.317	ENSPTIG00000016677	TRNAU1AP	95	55.124	Panthera_tigris_altaica
ENSPNAG00000024905	trnau1apa	83	48.846	ENSPTRG00000000434	-	90	53.138	Pan_troglodytes
ENSPNAG00000024905	trnau1apa	91	54.317	ENSPANG00000016019	TRNAU1AP	87	69.863	Papio_anubis
ENSPNAG00000024905	trnau1apa	91	57.193	ENSPKIG00000015511	trnau1apa	93	57.193	Paramormyrops_kingsleyae
ENSPNAG00000024905	trnau1apa	89	71.429	ENSPKIG00000022205	-	100	71.429	Paramormyrops_kingsleyae
ENSPNAG00000024905	trnau1apa	92	50.709	ENSPSIG00000006864	TRNAU1AP	100	51.916	Pelodiscus_sinensis
ENSPNAG00000024905	trnau1apa	94	52.727	ENSPMGG00000023893	trnau1apa	96	52.727	Periophthalmus_magnuspinnatus
ENSPNAG00000024905	trnau1apa	95	52.218	ENSPEMG00000007877	Trnau1ap	99	53.020	Peromyscus_maniculatus_bairdii
ENSPNAG00000024905	trnau1apa	72	47.297	ENSPMAG00000005934	trnau1apa	92	48.792	Petromyzon_marinus
ENSPNAG00000024905	trnau1apa	64	51.163	ENSPMAG00000000592	trnau1apa	97	51.136	Petromyzon_marinus
ENSPNAG00000024905	trnau1apa	97	51.466	ENSPFOG00000008100	trnau1apa	99	51.466	Poecilia_formosa
ENSPNAG00000024905	trnau1apa	93	50.508	ENSPLAG00000010236	trnau1apa	99	50.508	Poecilia_latipinna
ENSPNAG00000024905	trnau1apa	94	52.727	ENSPMEG00000016387	trnau1apa	95	52.727	Poecilia_mexicana
ENSPNAG00000024905	trnau1apa	94	53.696	ENSPREG00000019821	trnau1apa	95	61.111	Poecilia_reticulata
ENSPNAG00000024905	trnau1apa	91	40.647	ENSPPYG00000001639	-	95	46.718	Pongo_abelii
ENSPNAG00000024905	trnau1apa	93	43.333	ENSPCOG00000023470	-	100	43.866	Propithecus_coquereli
ENSPNAG00000024905	trnau1apa	95	51.370	ENSPCOG00000027712	-	99	53.020	Propithecus_coquereli
ENSPNAG00000024905	trnau1apa	91	54.317	ENSPVAG00000017214	TRNAU1AP	95	55.124	Pteropus_vampyrus
ENSPNAG00000024905	trnau1apa	97	53.226	ENSPNYG00000010130	trnau1apa	99	53.226	Pundamilia_nyererei
ENSPNAG00000024905	trnau1apa	64	64.706	ENSRNOG00000055344	Trnau1ap	82	54.400	Rattus_norvegicus
ENSPNAG00000024905	trnau1apa	91	54.317	ENSRBIG00000029083	TRNAU1AP	87	69.863	Rhinopithecus_bieti
ENSPNAG00000024905	trnau1apa	91	54.317	ENSRROG00000029128	TRNAU1AP	87	69.863	Rhinopithecus_roxellana
ENSPNAG00000024905	trnau1apa	91	54.317	ENSSBOG00000021299	TRNAU1AP	87	69.863	Saimiri_boliviensis_boliviensis
ENSPNAG00000024905	trnau1apa	91	54.317	ENSSHAG00000008108	TRNAU1AP	95	55.830	Sarcophilus_harrisii
ENSPNAG00000024905	trnau1apa	84	64.118	ENSSMAG00000020851	trnau1apa	99	50.637	Scophthalmus_maximus
ENSPNAG00000024905	trnau1apa	97	52.564	ENSSDUG00000011734	trnau1apa	99	53.526	Seriola_dumerili
ENSPNAG00000024905	trnau1apa	97	52.344	ENSSLDG00000012101	trnau1apa	99	52.344	Seriola_lalandi_dorsalis
ENSPNAG00000024905	trnau1apa	88	53.506	ENSSARG00000007536	TRNAU1AP	96	54.348	Sorex_araneus
ENSPNAG00000024905	trnau1apa	91	49.821	ENSSPUG00000010400	-	95	51.056	Sphenodon_punctatus
ENSPNAG00000024905	trnau1apa	56	41.714	ENSSPUG00000010415	-	94	41.714	Sphenodon_punctatus
ENSPNAG00000024905	trnau1apa	97	52.117	ENSSPAG00000005029	trnau1apa	99	52.443	Stegastes_partitus
ENSPNAG00000024905	trnau1apa	91	54.317	ENSSSCG00000030284	TRNAU1AP	95	55.124	Sus_scrofa
ENSPNAG00000024905	trnau1apa	62	40.526	ENSTGUG00000005908	-	100	39.252	Taeniopygia_guttata
ENSPNAG00000024905	trnau1apa	93	49.320	ENSTGUG00000000735	-	100	52.234	Taeniopygia_guttata
ENSPNAG00000024905	trnau1apa	97	52.303	ENSTRUG00000003352	trnau1apa	99	52.303	Takifugu_rubripes
ENSPNAG00000024905	trnau1apa	97	51.140	ENSTNIG00000006129	trnau1apa	99	51.140	Tetraodon_nigroviridis
ENSPNAG00000024905	trnau1apa	77	47.257	ENSTBEG00000008049	-	95	47.934	Tupaia_belangeri
ENSPNAG00000024905	trnau1apa	91	54.317	ENSTTRG00000001854	TRNAU1AP	99	53.020	Tursiops_truncatus
ENSPNAG00000024905	trnau1apa	87	54.307	ENSUAMG00000008789	TRNAU1AP	96	55.147	Ursus_americanus
ENSPNAG00000024905	trnau1apa	91	55.036	ENSUMAG00000011068	TRNAU1AP	95	56.184	Ursus_maritimus
ENSPNAG00000024905	trnau1apa	77	53.165	ENSVPAG00000006778	TRNAU1AP	80	54.132	Vicugna_pacos
ENSPNAG00000024905	trnau1apa	95	51.027	ENSVVUG00000012518	TRNAU1AP	93	51.852	Vulpes_vulpes
ENSPNAG00000024905	trnau1apa	97	50.649	ENSXMAG00000017361	trnau1apa	99	51.466	Xiphophorus_maculatus