EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000025019 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 5696 bases
Position: chrKV575592.1:892236-897931
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000035187	zf-CCHC	PF00098.23	1.6e-07	1	2
ENSPNAP00000035187	zf-CCHC	PF00098.23	1.6e-07	2	2
ENSPNAP00000035176	zf-CCHC	PF00098.23	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000039027	-	582	-	ENSPNAP00000035187	193 (aa)	-	-
ENSPNAT00000028343	-	558	-	ENSPNAP00000035176	185 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000025019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000025019's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000025019	-	69	54.135	ENSPNAG00000002955	-	68	76.042
ENSPNAG00000025019	-	83	48.125	ENSPNAG00000007153	-	52	72.727
ENSPNAG00000025019	-	82	53.642	ENSPNAG00000004865	-	61	52.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000025019	-	72	47.541	ENSSFOG00015004269	-	92	47.761	Scleropages_formosus
ENSPNAG00000025019	-	53	37.374	ENSSFOG00015023899	-	63	37.374	Scleropages_formosus