EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000025446 (Gene tree)
Gene ID: 108441079
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 10864 bases
Position: chrKV575672.1:460143-471006
Accession: 108441079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000035428	ResIII	PF04851.15	8.7e-08	1	1
ENSPNAP00000018928	ResIII	PF04851.15	9.5e-08	1	1
ENSPNAP00000035439	ResIII	PF04851.15	9.7e-08	1	1
ENSPNAP00000035428	DEAD	PF00270.29	3.2e-39	1	1
ENSPNAP00000018928	DEAD	PF00270.29	3.5e-39	1	1
ENSPNAP00000035439	DEAD	PF00270.29	3.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000028465	-	1671	XM_017720370	ENSPNAP00000035439	556 (aa)	XP_017575859	UPI0008143DC6
ENSPNAT00000039212	-	2299	-	ENSPNAP00000018928	550 (aa)	-	-
ENSPNAT00000028463	-	1593	-	ENSPNAP00000035428	530 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000025446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000025446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000025446	ddx56	77	31.579	ENSPNAG00000014707	ddx52	61	31.504
ENSPNAG00000025446	ddx56	76	31.034	ENSPNAG00000029431	DDX5	70	31.090
ENSPNAG00000025446	ddx56	70	42.105	ENSPNAG00000010102	ddx6	72	42.105
ENSPNAG00000025446	ddx56	81	31.616	ENSPNAG00000011435	ddx47	82	31.616

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000025446	ddx56	99	64.126	ENSG00000136271	DDX56	99	64.973	Homo_sapiens
ENSPNAG00000025446	ddx56	99	81.475	ENSAPOG00000017113	ddx56	99	81.475	Acanthochromis_polyacanthus
ENSPNAG00000025446	ddx56	99	63.925	ENSAMEG00000017711	DDX56	98	63.687	Ailuropoda_melanoleuca
ENSPNAG00000025446	ddx56	98	67.468	ENSACIG00000013747	ddx56	99	79.235	Amphilophus_citrinellus
ENSPNAG00000025446	ddx56	94	81.909	ENSAOCG00000018059	ddx56	94	82.470	Amphiprion_ocellaris
ENSPNAG00000025446	ddx56	91	82.582	ENSAOCG00000015447	-	87	82.822	Amphiprion_ocellaris
ENSPNAG00000025446	ddx56	99	80.541	ENSAPEG00000007267	ddx56	99	80.541	Amphiprion_percula
ENSPNAG00000025446	ddx56	99	80.000	ENSATEG00000005279	ddx56	99	80.180	Anabas_testudineus
ENSPNAG00000025446	ddx56	99	77.698	ENSACLG00000020113	ddx56	99	77.878	Astatotilapia_calliptera
ENSPNAG00000025446	ddx56	99	82.975	ENSAMXG00000019357	ddx56	99	83.333	Astyanax_mexicanus
ENSPNAG00000025446	ddx56	99	63.941	ENSBTAG00000010602	DDX56	98	63.755	Bos_taurus
ENSPNAG00000025446	ddx56	98	38.364	WBGene00016073	C24H12.4	86	38.698	Caenorhabditis_elegans
ENSPNAG00000025446	ddx56	99	64.014	ENSCJAG00000012233	DDX56	98	63.755	Callithrix_jacchus
ENSPNAG00000025446	ddx56	81	62.187	ENSCAFG00000029295	DDX56	99	61.905	Canis_familiaris
ENSPNAG00000025446	ddx56	98	65.709	ENSCAFG00020019695	DDX56	97	65.267	Canis_lupus_dingo
ENSPNAG00000025446	ddx56	99	64.179	ENSCHIG00000014261	DDX56	98	63.587	Capra_hircus
ENSPNAG00000025446	ddx56	99	64.312	ENSTSYG00000008048	DDX56	98	63.949	Carlito_syrichta
ENSPNAG00000025446	ddx56	87	63.410	ENSCAPG00000006286	DDX56	98	62.994	Cavia_aperea
ENSPNAG00000025446	ddx56	99	64.621	ENSCPOG00000003359	DDX56	98	64.260	Cavia_porcellus
ENSPNAG00000025446	ddx56	99	63.472	ENSCCAG00000025303	DDX56	98	63.383	Cebus_capucinus
ENSPNAG00000025446	ddx56	99	63.604	ENSCATG00000039389	DDX56	98	63.315	Cercocebus_atys
ENSPNAG00000025446	ddx56	99	64.130	ENSCLAG00000007666	DDX56	98	63.768	Chinchilla_lanigera
ENSPNAG00000025446	ddx56	99	63.604	ENSCSAG00000015636	DDX56	97	64.299	Chlorocebus_sabaeus
ENSPNAG00000025446	ddx56	99	69.455	ENSCPBG00000024556	DDX56	97	69.118	Chrysemys_picta_bellii
ENSPNAG00000025446	ddx56	93	61.800	ENSCING00000005185	-	98	61.448	Ciona_intestinalis
ENSPNAG00000025446	ddx56	93	60.721	ENSCSAVG00000011266	-	99	60.721	Ciona_savignyi
ENSPNAG00000025446	ddx56	99	64.126	ENSCANG00000028187	DDX56	98	64.126	Colobus_angolensis_palliatus
ENSPNAG00000025446	ddx56	99	64.312	ENSCGRG00001019019	Ddx56	98	63.806	Cricetulus_griseus_chok1gshd
ENSPNAG00000025446	ddx56	99	64.312	ENSCGRG00000011870	Ddx56	98	63.806	Cricetulus_griseus_crigri
ENSPNAG00000025446	ddx56	100	76.649	ENSCSEG00000008368	ddx56	99	76.471	Cynoglossus_semilaevis
ENSPNAG00000025446	ddx56	99	78.237	ENSCVAG00000006499	ddx56	99	78.777	Cyprinodon_variegatus
ENSPNAG00000025446	ddx56	99	81.047	ENSDARG00000020913	ddx56	98	81.588	Danio_rerio
ENSPNAG00000025446	ddx56	87	62.786	ENSDNOG00000036526	DDX56	97	62.796	Dasypus_novemcinctus
ENSPNAG00000025446	ddx56	98	49.548	FBgn0001565	Hlc	95	49.360	Drosophila_melanogaster
ENSPNAG00000025446	ddx56	66	70.833	ENSETEG00000002969	-	64	70.833	Echinops_telfairi
ENSPNAG00000025446	ddx56	89	44.748	ENSETEG00000019559	-	100	44.328	Echinops_telfairi
ENSPNAG00000025446	ddx56	99	63.964	ENSEBUG00000009986	ddx56	99	63.964	Eptatretus_burgeri
ENSPNAG00000025446	ddx56	99	63.246	ENSEASG00005017795	DDX56	98	62.873	Equus_asinus_asinus
ENSPNAG00000025446	ddx56	99	63.246	ENSECAG00000019897	DDX56	98	62.873	Equus_caballus
ENSPNAG00000025446	ddx56	86	62.839	ENSEEUG00000004849	DDX56	98	62.213	Erinaceus_europaeus
ENSPNAG00000025446	ddx56	99	80.721	ENSELUG00000004150	ddx56	99	81.261	Esox_lucius
ENSPNAG00000025446	ddx56	98	64.103	ENSFCAG00000010261	DDX56	97	63.894	Felis_catus
ENSPNAG00000025446	ddx56	99	64.444	ENSFDAG00000007128	DDX56	98	64.312	Fukomys_damarensis
ENSPNAG00000025446	ddx56	99	79.550	ENSFHEG00000018008	ddx56	99	79.737	Fundulus_heteroclitus
ENSPNAG00000025446	ddx56	99	75.422	ENSGAFG00000006906	ddx56	98	75.610	Gambusia_affinis
ENSPNAG00000025446	ddx56	96	72.016	ENSGAGG00000006789	DDX56	97	68.288	Gopherus_agassizii
ENSPNAG00000025446	ddx56	99	64.126	ENSGGOG00000012031	DDX56	98	63.941	Gorilla_gorilla
ENSPNAG00000025446	ddx56	98	72.119	ENSHBUG00000015246	ddx56	96	72.491	Haplochromis_burtoni
ENSPNAG00000025446	ddx56	99	64.312	ENSHGLG00000017271	DDX56	98	64.338	Heterocephalus_glaber_female
ENSPNAG00000025446	ddx56	99	64.312	ENSHGLG00100015731	DDX56	98	64.338	Heterocephalus_glaber_male
ENSPNAG00000025446	ddx56	99	76.036	ENSHCOG00000001685	ddx56	98	75.676	Hippocampus_comes
ENSPNAG00000025446	ddx56	99	83.032	ENSIPUG00000006602	ddx56	97	83.394	Ictalurus_punctatus
ENSPNAG00000025446	ddx56	99	63.704	ENSSTOG00000000464	DDX56	98	63.519	Ictidomys_tridecemlineatus
ENSPNAG00000025446	ddx56	99	63.941	ENSJJAG00000014269	Ddx56	99	63.755	Jaculus_jaculus
ENSPNAG00000025446	ddx56	99	77.158	ENSKMAG00000016611	ddx56	99	78.695	Kryptolebias_marmoratus
ENSPNAG00000025446	ddx56	99	79.032	ENSLBEG00000026281	ddx56	99	78.853	Labrus_bergylta
ENSPNAG00000025446	ddx56	99	73.140	ENSLACG00000015551	DDX56	96	73.007	Latimeria_chalumnae
ENSPNAG00000025446	ddx56	100	80.645	ENSLOCG00000015185	ddx56	99	80.645	Lepisosteus_oculatus
ENSPNAG00000025446	ddx56	99	64.222	ENSLAFG00000018206	DDX56	99	63.838	Loxodonta_africana
ENSPNAG00000025446	ddx56	99	63.501	ENSMFAG00000041001	DDX56	98	63.315	Macaca_fascicularis
ENSPNAG00000025446	ddx56	99	63.501	ENSMMUG00000002645	DDX56	98	63.315	Macaca_mulatta
ENSPNAG00000025446	ddx56	99	63.501	ENSMNEG00000028492	DDX56	98	63.315	Macaca_nemestrina
ENSPNAG00000025446	ddx56	99	63.873	ENSMLEG00000043591	DDX56	98	63.687	Mandrillus_leucophaeus
ENSPNAG00000025446	ddx56	99	78.636	ENSMAMG00000007776	ddx56	99	78.815	Mastacembelus_armatus
ENSPNAG00000025446	ddx56	99	77.698	ENSMZEG00005009813	ddx56	99	77.878	Maylandia_zebra
ENSPNAG00000025446	ddx56	99	64.545	ENSMICG00000005550	DDX56	97	64.112	Microcebus_murinus
ENSPNAG00000025446	ddx56	99	63.538	ENSMOCG00000016782	Ddx56	98	63.383	Microtus_ochrogaster
ENSPNAG00000025446	ddx56	99	78.026	ENSMMOG00000009654	ddx56	95	83.300	Mola_mola
ENSPNAG00000025446	ddx56	99	60.503	ENSMODG00000016137	DDX56	98	59.425	Monodelphis_domestica
ENSPNAG00000025446	ddx56	71	75.726	ENSMALG00000016910	ddx56	99	75.726	Monopterus_albus
ENSPNAG00000025446	ddx56	99	63.197	MGP_CAROLIEiJ_G0016069	Ddx56	98	65.863	Mus_caroli
ENSPNAG00000025446	ddx56	99	63.011	ENSMUSG00000004393	Ddx56	98	65.462	Mus_musculus
ENSPNAG00000025446	ddx56	99	63.011	MGP_PahariEiJ_G0016822	Ddx56	98	65.323	Mus_pahari
ENSPNAG00000025446	ddx56	99	63.011	MGP_SPRETEiJ_G0016911	Ddx56	98	65.462	Mus_spretus
ENSPNAG00000025446	ddx56	99	63.538	ENSMPUG00000018196	DDX56	86	63.315	Mustela_putorius_furo
ENSPNAG00000025446	ddx56	99	64.193	ENSMLUG00000003509	DDX56	99	63.822	Myotis_lucifugus
ENSPNAG00000025446	ddx56	99	64.260	ENSNGAG00000018785	Ddx56	98	63.941	Nannospalax_galili
ENSPNAG00000025446	ddx56	98	73.420	ENSNBRG00000002656	ddx56	97	73.420	Neolamprologus_brichardi
ENSPNAG00000025446	ddx56	99	64.195	ENSNLEG00000003816	DDX56	98	63.941	Nomascus_leucogenys
ENSPNAG00000025446	ddx56	93	61.010	ENSMEUG00000006788	DDX56	99	60.808	Notamacropus_eugenii
ENSPNAG00000025446	ddx56	99	62.635	ENSOPRG00000000292	-	98	62.477	Ochotona_princeps
ENSPNAG00000025446	ddx56	70	66.667	ENSODEG00000014807	DDX56	99	66.488	Octodon_degus
ENSPNAG00000025446	ddx56	99	77.052	ENSONIG00000011509	ddx56	99	77.052	Oreochromis_niloticus
ENSPNAG00000025446	ddx56	96	57.431	ENSOANG00000006320	-	99	57.431	Ornithorhynchus_anatinus
ENSPNAG00000025446	ddx56	51	63.469	ENSOANG00000010592	-	99	63.838	Ornithorhynchus_anatinus
ENSPNAG00000025446	ddx56	75	56.219	ENSOANG00000015987	-	94	56.219	Ornithorhynchus_anatinus
ENSPNAG00000025446	ddx56	99	63.822	ENSOCUG00000022918	DDX56	98	64.007	Oryctolagus_cuniculus
ENSPNAG00000025446	ddx56	99	77.495	ENSORLG00000001434	ddx56	98	76.951	Oryzias_latipes
ENSPNAG00000025446	ddx56	99	77.314	ENSORLG00020015718	ddx56	94	76.770	Oryzias_latipes_hni
ENSPNAG00000025446	ddx56	99	77.495	ENSORLG00015003004	ddx56	94	76.951	Oryzias_latipes_hsok
ENSPNAG00000025446	ddx56	99	76.978	ENSOMEG00000022072	ddx56	99	76.439	Oryzias_melastigma
ENSPNAG00000025446	ddx56	99	64.364	ENSOGAG00000009981	DDX56	97	64.860	Otolemur_garnettii
ENSPNAG00000025446	ddx56	99	64.126	ENSOARG00000015240	DDX56	98	63.755	Ovis_aries
ENSPNAG00000025446	ddx56	99	52.407	ENSPPAG00000031263	-	96	53.435	Pan_paniscus
ENSPNAG00000025446	ddx56	99	61.609	ENSPPAG00000029147	DDX56	98	61.243	Pan_paniscus
ENSPNAG00000025446	ddx56	98	64.652	ENSPPRG00000014594	DDX56	97	63.977	Panthera_pardus
ENSPNAG00000025446	ddx56	85	62.368	ENSPTIG00000019500	DDX56	89	62.500	Panthera_tigris_altaica
ENSPNAG00000025446	ddx56	99	64.126	ENSPTRG00000019147	DDX56	98	63.941	Pan_troglodytes
ENSPNAG00000025446	ddx56	94	53.321	ENSPTRG00000052765	-	98	54.102	Pan_troglodytes
ENSPNAG00000025446	ddx56	99	63.501	ENSPANG00000002446	DDX56	98	63.315	Papio_anubis
ENSPNAG00000025446	ddx56	99	80.622	ENSPKIG00000018998	ddx56	98	78.957	Paramormyrops_kingsleyae
ENSPNAG00000025446	ddx56	100	77.861	ENSPMGG00000017421	ddx56	99	78.957	Periophthalmus_magnuspinnatus
ENSPNAG00000025446	ddx56	99	66.547	ENSPCIG00000009336	DDX56	98	65.653	Phascolarctos_cinereus
ENSPNAG00000025446	ddx56	99	78.777	ENSPFOG00000018658	ddx56	99	78.597	Poecilia_formosa
ENSPNAG00000025446	ddx56	99	79.206	ENSPLAG00000019208	ddx56	99	78.777	Poecilia_latipinna
ENSPNAG00000025446	ddx56	99	79.135	ENSPMEG00000001775	ddx56	99	78.947	Poecilia_mexicana
ENSPNAG00000025446	ddx56	99	78.479	ENSPREG00000015142	ddx56	99	78.597	Poecilia_reticulata
ENSPNAG00000025446	ddx56	99	64.312	ENSPPYG00000017591	DDX56	98	64.126	Pongo_abelii
ENSPNAG00000025446	ddx56	96	65.583	ENSPCAG00000011499	DDX56	99	65.392	Procavia_capensis
ENSPNAG00000025446	ddx56	99	63.949	ENSPCOG00000024864	DDX56	98	63.687	Propithecus_coquereli
ENSPNAG00000025446	ddx56	87	69.378	ENSPVAG00000000791	DDX56	86	69.378	Pteropus_vampyrus
ENSPNAG00000025446	ddx56	99	77.518	ENSPNYG00000019212	ddx56	99	77.698	Pundamilia_nyererei
ENSPNAG00000025446	ddx56	99	62.825	ENSRNOG00000004670	Ddx56	98	62.639	Rattus_norvegicus
ENSPNAG00000025446	ddx56	99	64.126	ENSRBIG00000030140	DDX56	98	63.941	Rhinopithecus_bieti
ENSPNAG00000025446	ddx56	99	63.941	ENSRROG00000044428	DDX56	98	63.755	Rhinopithecus_roxellana
ENSPNAG00000025446	ddx56	98	44.576	YLR276C	-	98	44.992	Saccharomyces_cerevisiae
ENSPNAG00000025446	ddx56	99	63.653	ENSSBOG00000034339	DDX56	98	63.383	Saimiri_boliviensis_boliviensis
ENSPNAG00000025446	ddx56	87	65.909	ENSSHAG00000016615	DDX56	98	64.669	Sarcophilus_harrisii
ENSPNAG00000025446	ddx56	99	77.338	ENSSFOG00015012795	ddx56	98	76.978	Scleropages_formosus
ENSPNAG00000025446	ddx56	99	79.053	ENSSMAG00000011280	ddx56	99	80.000	Scophthalmus_maximus
ENSPNAG00000025446	ddx56	99	80.790	ENSSDUG00000023597	ddx56	99	80.790	Seriola_dumerili
ENSPNAG00000025446	ddx56	99	80.610	ENSSLDG00000018369	ddx56	99	80.610	Seriola_lalandi_dorsalis
ENSPNAG00000025446	ddx56	76	75.862	ENSSARG00000014363	DDX56	78	71.014	Sorex_araneus
ENSPNAG00000025446	ddx56	100	70.483	ENSSPUG00000000784	DDX56	96	69.589	Sphenodon_punctatus
ENSPNAG00000025446	ddx56	98	80.483	ENSSPAG00000009392	ddx56	99	80.483	Stegastes_partitus
ENSPNAG00000025446	ddx56	99	64.000	ENSSSCG00000016745	DDX56	98	63.873	Sus_scrofa
ENSPNAG00000025446	ddx56	99	77.957	ENSTRUG00000018623	ddx56	99	77.957	Takifugu_rubripes
ENSPNAG00000025446	ddx56	100	76.732	ENSTNIG00000013593	ddx56	99	76.554	Tetraodon_nigroviridis
ENSPNAG00000025446	ddx56	99	64.324	ENSTBEG00000007119	DDX56	98	63.822	Tupaia_belangeri
ENSPNAG00000025446	ddx56	86	62.474	ENSTTRG00000010552	DDX56	97	62.473	Tursiops_truncatus
ENSPNAG00000025446	ddx56	99	63.687	ENSUAMG00000014194	DDX56	98	63.687	Ursus_americanus
ENSPNAG00000025446	ddx56	99	63.687	ENSUMAG00000009666	DDX56	98	63.687	Ursus_maritimus
ENSPNAG00000025446	ddx56	98	64.030	ENSVVUG00000011905	DDX56	97	63.790	Vulpes_vulpes
ENSPNAG00000025446	ddx56	99	71.841	ENSXETG00000019000	ddx56	99	71.841	Xenopus_tropicalis
ENSPNAG00000025446	ddx56	99	78.828	ENSXCOG00000017413	ddx56	98	79.017	Xiphophorus_couchianus
ENSPNAG00000025446	ddx56	99	78.571	ENSXMAG00000018749	ddx56	99	78.571	Xiphophorus_maculatus