EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000025570 (Gene tree)
Gene ID: 108442839
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF58.1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 26200 bases
Position: chrKV575788.1:63576-89775
Accession: 108442839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	1	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	2	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	3	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	4	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	5	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	6	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	7	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	8	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	9	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	10	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	11	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	12	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	13	14
ENSPNAP00000035527	zf-C2H2	PF00096.26	9.5e-75	14	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	1	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	2	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	3	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	4	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	5	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	6	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	7	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	8	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	9	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	10	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	11	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	12	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	13	14
ENSPNAP00000019061	zf-C2H2	PF00096.26	9.6e-75	14	14
ENSPNAP00000019061	zf-met	PF12874.7	3.3e-12	1	2
ENSPNAP00000019061	zf-met	PF12874.7	3.3e-12	2	2
ENSPNAP00000035527	zf-met	PF12874.7	3.3e-12	1	2
ENSPNAP00000035527	zf-met	PF12874.7	3.3e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000028644	-	2929	XM_017723082	ENSPNAP00000019061	674 (aa)	XP_017578571	-
ENSPNAT00000028658	-	3309	-	ENSPNAP00000035527	674 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000025570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000025570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000025570	-	89	43.464	ENSPNAG00000016045	-	86	50.909
ENSPNAG00000025570	-	92	40.122	ENSPNAG00000011660	-	57	40.122
ENSPNAG00000025570	-	78	37.500	ENSPNAG00000015896	snai2	55	37.500
ENSPNAG00000025570	-	85	30.677	ENSPNAG00000021863	-	86	31.027
ENSPNAG00000025570	-	80	32.847	ENSPNAG00000006535	znf319b	85	34.236
ENSPNAG00000025570	-	82	45.515	ENSPNAG00000019338	-	95	45.515
ENSPNAG00000025570	-	81	46.575	ENSPNAG00000008491	-	78	46.575
ENSPNAG00000025570	-	81	36.275	ENSPNAG00000024123	snai1b	57	36.275
ENSPNAG00000025570	-	82	42.676	ENSPNAG00000016478	-	99	42.676
ENSPNAG00000025570	-	79	43.119	ENSPNAG00000014299	-	58	43.119
ENSPNAG00000025570	-	80	47.126	ENSPNAG00000018644	-	95	47.126
ENSPNAG00000025570	-	91	40.458	ENSPNAG00000025465	zbtb14	62	40.506
ENSPNAG00000025570	-	78	43.077	ENSPNAG00000004318	zbtb47a	74	43.077
ENSPNAG00000025570	-	99	40.083	ENSPNAG00000000303	-	84	40.081
ENSPNAG00000025570	-	81	43.110	ENSPNAG00000008653	-	97	43.110
ENSPNAG00000025570	-	79	43.147	ENSPNAG00000011625	-	94	43.147
ENSPNAG00000025570	-	86	36.898	ENSPNAG00000005946	-	91	33.984
ENSPNAG00000025570	-	81	46.667	ENSPNAG00000010850	-	85	46.667
ENSPNAG00000025570	-	82	42.771	ENSPNAG00000003702	-	86	39.440
ENSPNAG00000025570	-	81	38.333	ENSPNAG00000023191	-	99	38.333
ENSPNAG00000025570	-	82	44.118	ENSPNAG00000021075	-	98	44.118
ENSPNAG00000025570	-	87	41.899	ENSPNAG00000028765	-	95	41.899
ENSPNAG00000025570	-	81	45.188	ENSPNAG00000015116	-	67	45.188
ENSPNAG00000025570	-	80	36.747	ENSPNAG00000017222	patz1	63	36.747
ENSPNAG00000025570	-	83	47.418	ENSPNAG00000015513	si:dkey-210j14.3	90	47.418
ENSPNAG00000025570	-	82	39.835	ENSPNAG00000010317	-	85	39.340
ENSPNAG00000025570	-	83	41.718	ENSPNAG00000028014	GFI1	54	41.718
ENSPNAG00000025570	-	88	43.223	ENSPNAG00000002287	-	100	43.511
ENSPNAG00000025570	-	82	42.821	ENSPNAG00000009176	-	89	43.296
ENSPNAG00000025570	-	79	44.304	ENSPNAG00000016025	-	91	43.421
ENSPNAG00000025570	-	85	44.969	ENSPNAG00000025882	-	64	44.969
ENSPNAG00000025570	-	83	44.940	ENSPNAG00000008480	-	96	43.978
ENSPNAG00000025570	-	79	32.319	ENSPNAG00000024689	wu:fe05a04	55	32.319
ENSPNAG00000025570	-	82	47.170	ENSPNAG00000020929	sall4	55	46.000
ENSPNAG00000025570	-	81	42.363	ENSPNAG00000012495	-	82	42.363
ENSPNAG00000025570	-	94	30.490	ENSPNAG00000025211	-	84	30.672
ENSPNAG00000025570	-	82	40.167	ENSPNAG00000012206	-	95	40.167
ENSPNAG00000025570	-	82	37.688	ENSPNAG00000012205	zbtb16b	51	37.688
ENSPNAG00000025570	-	82	44.402	ENSPNAG00000012154	-	92	44.402
ENSPNAG00000025570	-	82	42.705	ENSPNAG00000000066	-	81	42.705
ENSPNAG00000025570	-	80	42.857	ENSPNAG00000001150	znf648	62	42.857
ENSPNAG00000025570	-	82	47.183	ENSPNAG00000012215	-	89	47.183
ENSPNAG00000025570	-	81	43.260	ENSPNAG00000012366	-	88	43.260
ENSPNAG00000025570	-	85	44.845	ENSPNAG00000000088	-	98	44.845
ENSPNAG00000025570	-	99	39.655	ENSPNAG00000017138	znf236	96	43.000
ENSPNAG00000025570	-	79	42.378	ENSPNAG00000029386	-	95	42.378
ENSPNAG00000025570	-	89	38.421	ENSPNAG00000002244	-	96	38.421
ENSPNAG00000025570	-	80	43.913	ENSPNAG00000029997	-	91	43.913
ENSPNAG00000025570	-	82	45.532	ENSPNAG00000012138	-	97	45.532
ENSPNAG00000025570	-	82	46.278	ENSPNAG00000003017	-	89	46.278
ENSPNAG00000025570	-	81	40.000	ENSPNAG00000027258	gfi1ab	55	40.000
ENSPNAG00000025570	-	79	43.781	ENSPNAG00000007266	-	99	43.781
ENSPNAG00000025570	-	88	46.087	ENSPNAG00000007265	-	95	46.087
ENSPNAG00000025570	-	78	38.679	ENSPNAG00000019031	-	51	38.679
ENSPNAG00000025570	-	78	31.217	ENSPNAG00000013245	zgc:112083	53	31.217
ENSPNAG00000025570	-	88	40.991	ENSPNAG00000019534	-	96	40.878
ENSPNAG00000025570	-	99	42.405	ENSPNAG00000021118	gfi1b	83	42.405
ENSPNAG00000025570	-	81	30.645	ENSPNAG00000024807	-	63	30.833
ENSPNAG00000025570	-	83	45.679	ENSPNAG00000018409	-	93	45.679
ENSPNAG00000025570	-	79	40.580	ENSPNAG00000017415	scrt1a	90	40.580
ENSPNAG00000025570	-	99	33.621	ENSPNAG00000028747	znf711	68	33.621
ENSPNAG00000025570	-	79	46.269	ENSPNAG00000027676	-	90	46.269
ENSPNAG00000025570	-	83	46.104	ENSPNAG00000018471	-	81	46.104
ENSPNAG00000025570	-	79	44.749	ENSPNAG00000018395	-	92	44.749
ENSPNAG00000025570	-	84	33.735	ENSPNAG00000007237	-	100	33.735
ENSPNAG00000025570	-	82	44.068	ENSPNAG00000007072	-	95	44.068
ENSPNAG00000025570	-	78	41.791	ENSPNAG00000027880	-	56	34.857
ENSPNAG00000025570	-	93	34.127	ENSPNAG00000016034	zbtb41	60	32.432
ENSPNAG00000025570	-	82	45.620	ENSPNAG00000018437	-	80	45.620
ENSPNAG00000025570	-	78	42.378	ENSPNAG00000017468	-	94	40.960
ENSPNAG00000025570	-	95	43.243	ENSPNAG00000000783	-	99	46.667
ENSPNAG00000025570	-	81	45.669	ENSPNAG00000021942	-	99	45.669
ENSPNAG00000025570	-	82	42.657	ENSPNAG00000006039	-	92	42.012
ENSPNAG00000025570	-	81	41.753	ENSPNAG00000017479	-	86	41.753
ENSPNAG00000025570	-	80	44.792	ENSPNAG00000009741	-	57	44.041
ENSPNAG00000025570	-	82	41.818	ENSPNAG00000004042	si:ch211-166g5.4	86	34.756
ENSPNAG00000025570	-	79	77.528	ENSPNAG00000006821	-	97	77.528
ENSPNAG00000025570	-	82	44.079	ENSPNAG00000009164	-	86	43.434
ENSPNAG00000025570	-	81	35.714	ENSPNAG00000027229	znf341	52	35.714
ENSPNAG00000025570	-	82	43.902	ENSPNAG00000005829	-	98	41.091
ENSPNAG00000025570	-	86	47.706	ENSPNAG00000011679	-	54	47.706
ENSPNAG00000025570	-	84	45.455	ENSPNAG00000005914	-	90	45.455
ENSPNAG00000025570	-	81	47.826	ENSPNAG00000010678	-	87	47.826
ENSPNAG00000025570	-	79	46.043	ENSPNAG00000004784	-	50	43.089
ENSPNAG00000025570	-	87	43.048	ENSPNAG00000003526	-	91	43.266
ENSPNAG00000025570	-	80	38.333	ENSPNAG00000026181	prdm5	92	38.333
ENSPNAG00000025570	-	82	43.038	ENSPNAG00000021765	-	94	43.038
ENSPNAG00000025570	-	81	40.802	ENSPNAG00000009184	-	91	39.211
ENSPNAG00000025570	-	81	44.951	ENSPNAG00000014492	-	89	44.951
ENSPNAG00000025570	-	82	43.802	ENSPNAG00000003919	-	96	43.802
ENSPNAG00000025570	-	81	33.083	ENSPNAG00000020571	znf526	71	41.333
ENSPNAG00000025570	-	80	42.667	ENSPNAG00000000488	-	89	42.667
ENSPNAG00000025570	-	79	47.887	ENSPNAG00000027916	-	84	47.887
ENSPNAG00000025570	-	83	42.478	ENSPNAG00000000219	-	94	42.478
ENSPNAG00000025570	-	80	39.326	ENSPNAG00000016198	ovol1b	81	39.326
ENSPNAG00000025570	-	83	40.141	ENSPNAG00000010752	-	97	40.141
ENSPNAG00000025570	-	82	42.010	ENSPNAG00000005857	-	95	41.007
ENSPNAG00000025570	-	83	45.749	ENSPNAG00000024704	-	96	45.749
ENSPNAG00000025570	-	86	42.964	ENSPNAG00000002209	-	94	42.964
ENSPNAG00000025570	-	82	44.505	ENSPNAG00000015131	-	91	44.505
ENSPNAG00000025570	-	81	43.966	ENSPNAG00000017455	-	83	46.784
ENSPNAG00000025570	-	83	41.398	ENSPNAG00000021831	-	97	41.398

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000025570	-	82	37.091	ENSAPOG00000004328	-	88	37.143	Acanthochromis_polyacanthus
ENSPNAG00000025570	-	79	39.852	ENSAPOG00000013511	-	52	39.852	Acanthochromis_polyacanthus
ENSPNAG00000025570	-	86	35.714	ENSACIG00000010739	-	82	35.714	Amphilophus_citrinellus
ENSPNAG00000025570	-	82	37.818	ENSAOCG00000007045	-	84	37.818	Amphiprion_ocellaris
ENSPNAG00000025570	-	82	42.136	ENSAPEG00000016483	-	78	42.136	Amphiprion_percula
ENSPNAG00000025570	-	81	38.529	ENSAPEG00000001596	-	76	37.966	Amphiprion_percula
ENSPNAG00000025570	-	79	41.753	ENSATEG00000006085	-	85	38.024	Anabas_testudineus
ENSPNAG00000025570	-	82	40.768	ENSACAG00000000082	-	99	40.768	Anolis_carolinensis
ENSPNAG00000025570	-	82	43.631	ENSACAG00000025537	-	96	43.631	Anolis_carolinensis
ENSPNAG00000025570	-	80	46.448	ENSAMXG00000033013	-	84	46.448	Astyanax_mexicanus
ENSPNAG00000025570	-	81	46.429	ENSAMXG00000035145	-	68	46.429	Astyanax_mexicanus
ENSPNAG00000025570	-	80	43.629	ENSAMXG00000036257	-	91	43.629	Astyanax_mexicanus
ENSPNAG00000025570	-	90	43.662	ENSAMXG00000012873	-	98	44.574	Astyanax_mexicanus
ENSPNAG00000025570	-	82	42.373	ENSAMXG00000026143	-	96	42.373	Astyanax_mexicanus
ENSPNAG00000025570	-	84	42.090	ENSAMXG00000032237	-	96	42.090	Astyanax_mexicanus
ENSPNAG00000025570	-	81	46.358	ENSAMXG00000035949	-	83	46.358	Astyanax_mexicanus
ENSPNAG00000025570	-	88	36.682	ENSCVAG00000011235	-	89	36.682	Cyprinodon_variegatus
ENSPNAG00000025570	-	80	40.233	ENSELUG00000013844	-	83	34.402	Esox_lucius
ENSPNAG00000025570	-	87	38.923	ENSELUG00000021287	-	78	38.923	Esox_lucius
ENSPNAG00000025570	-	80	41.644	ENSELUG00000013357	-	86	41.644	Esox_lucius
ENSPNAG00000025570	-	83	41.092	ENSFHEG00000019915	-	91	37.692	Fundulus_heteroclitus
ENSPNAG00000025570	-	84	39.298	ENSGMOG00000003238	-	100	39.298	Gadus_morhua
ENSPNAG00000025570	-	83	37.532	ENSGAFG00000003150	-	91	41.916	Gambusia_affinis
ENSPNAG00000025570	-	82	39.493	ENSGAFG00000012977	-	90	39.493	Gambusia_affinis
ENSPNAG00000025570	-	91	42.453	ENSIPUG00000004428	-	87	41.629	Ictalurus_punctatus
ENSPNAG00000025570	-	81	44.543	ENSIPUG00000006916	-	77	41.534	Ictalurus_punctatus
ENSPNAG00000025570	-	81	44.279	ENSIPUG00000021556	-	97	44.279	Ictalurus_punctatus
ENSPNAG00000025570	-	84	38.144	ENSKMAG00000004988	-	85	38.144	Kryptolebias_marmoratus
ENSPNAG00000025570	-	87	39.730	ENSLOCG00000014144	-	100	39.730	Lepisosteus_oculatus
ENSPNAG00000025570	-	83	36.949	ENSLOCG00000014366	-	94	35.838	Lepisosteus_oculatus
ENSPNAG00000025570	-	81	43.023	ENSMAMG00000016542	-	81	43.023	Mastacembelus_armatus
ENSPNAG00000025570	-	79	46.000	ENSMAMG00000019301	-	95	46.000	Mastacembelus_armatus
ENSPNAG00000025570	-	85	37.736	ENSMMOG00000009852	-	93	39.655	Mola_mola
ENSPNAG00000025570	-	82	49.091	ENSMALG00000005554	-	99	40.120	Monopterus_albus
ENSPNAG00000025570	-	79	35.106	ENSOCUG00000005876	-	100	37.452	Oryctolagus_cuniculus
ENSPNAG00000025570	-	81	48.905	ENSPKIG00000006616	-	61	40.722	Paramormyrops_kingsleyae
ENSPNAG00000025570	-	80	37.963	ENSPMGG00000017633	-	97	39.698	Periophthalmus_magnuspinnatus
ENSPNAG00000025570	-	97	37.805	ENSPFOG00000010682	-	98	37.805	Poecilia_formosa
ENSPNAG00000025570	-	79	40.000	ENSPLAG00000002892	-	70	40.000	Poecilia_latipinna
ENSPNAG00000025570	-	84	36.644	ENSPMEG00000001399	-	90	36.644	Poecilia_mexicana
ENSPNAG00000025570	-	91	47.619	ENSPREG00000002582	-	84	35.169	Poecilia_reticulata
ENSPNAG00000025570	-	82	39.273	ENSPREG00000001386	-	90	39.273	Poecilia_reticulata
ENSPNAG00000025570	-	79	44.643	ENSSFOG00015006108	-	59	44.643	Scleropages_formosus
ENSPNAG00000025570	-	89	46.099	ENSSMAG00000009115	-	97	53.704	Scophthalmus_maximus
ENSPNAG00000025570	-	81	37.819	ENSSDUG00000006463	-	88	37.363	Seriola_dumerili
ENSPNAG00000025570	-	82	52.941	ENSSDUG00000002195	-	86	52.941	Seriola_dumerili
ENSPNAG00000025570	-	78	45.833	ENSSLDG00000006724	-	97	45.833	Seriola_lalandi_dorsalis
ENSPNAG00000025570	-	80	42.697	ENSSLDG00000020727	-	96	41.104	Seriola_lalandi_dorsalis
ENSPNAG00000025570	-	85	44.318	ENSSPAG00000021008	-	96	44.318	Stegastes_partitus
ENSPNAG00000025570	-	80	37.063	ENSSPAG00000012960	-	81	36.879	Stegastes_partitus
ENSPNAG00000025570	-	83	39.344	ENSTRUG00000021675	-	78	39.344	Takifugu_rubripes
ENSPNAG00000025570	-	80	42.606	ENSTRUG00000005321	-	95	42.606	Takifugu_rubripes
ENSPNAG00000025570	-	80	41.228	ENSTNIG00000008200	-	100	41.228	Tetraodon_nigroviridis
ENSPNAG00000025570	-	82	43.304	ENSTNIG00000000320	-	100	43.304	Tetraodon_nigroviridis
ENSPNAG00000025570	-	83	42.395	ENSXETG00000006575	znf420	84	42.395	Xenopus_tropicalis
ENSPNAG00000025570	-	82	45.122	ENSXCOG00000009665	-	91	45.122	Xiphophorus_couchianus
ENSPNAG00000025570	-	82	39.273	ENSXMAG00000028625	-	90	39.273	Xiphophorus_maculatus