EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000025732 (Gene tree)
Gene ID: 108435048
Gene Symbol: p4ha1a
Alias: si:ch211-146f4.5
Full Name: prolyl 4-hydroxylase subunit alpha 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 30911 bases
Position: chrKV575457.1:1221899-1252809
Accession: 108435048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000035574	2OG-FeII_Oxy	PF03171.20	1.7e-08	1	1
ENSPNAP00000035583	2OG-FeII_Oxy	PF03171.20	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000028839	-	1793	XM_017710582	ENSPNAP00000035583	542 (aa)	XP_017566071	UPI0008147332
ENSPNAT00000028776	-	1793	XM_017710583	ENSPNAP00000035574	542 (aa)	XP_017566072	UPI0008145CF7

Gene Model

Click here to download ENSPNAG00000025732's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000025732's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000025732	p4ha1a	98	77.757	ENSPNAG00000023149	p4ha1b	99	77.551
ENSPNAG00000025732	p4ha1a	99	64.935	ENSPNAG00000014592	p4ha2	100	64.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000025732	p4ha1a	77	64.439	ENSAPOG00000008101	p4ha1a	85	63.246	Acanthochromis_polyacanthus
ENSPNAG00000025732	p4ha1a	95	79.377	ENSACIG00000014303	p4ha1a	99	76.580	Amphilophus_citrinellus
ENSPNAG00000025732	p4ha1a	99	77.323	ENSAOCG00000005514	-	99	77.052	Amphiprion_ocellaris
ENSPNAG00000025732	p4ha1a	99	69.274	ENSAOCG00000005531	p4ha1a	99	68.843	Amphiprion_ocellaris
ENSPNAG00000025732	p4ha1a	99	76.766	ENSAPEG00000010462	-	99	76.493	Amphiprion_percula
ENSPNAG00000025732	p4ha1a	100	88.007	ENSAMXG00000018364	p4ha1a	100	87.269	Astyanax_mexicanus
ENSPNAG00000025732	p4ha1a	96	74.517	ENSCSEG00000001857	-	97	75.338	Cynoglossus_semilaevis
ENSPNAG00000025732	p4ha1a	98	73.872	ENSCVAG00000020081	p4ha1a	98	73.684	Cyprinodon_variegatus
ENSPNAG00000025732	p4ha1a	100	85.055	ENSDARG00000033537	p4ha1a	99	85.424	Danio_rerio
ENSPNAG00000025732	p4ha1a	100	80.256	ENSELUG00000005174	p4ha1a	100	79.342	Esox_lucius
ENSPNAG00000025732	p4ha1a	99	79.113	ENSMAMG00000010119	p4ha1a	99	79.074	Mastacembelus_armatus
ENSPNAG00000025732	p4ha1a	95	75.822	ENSMMOG00000009210	-	95	75.242	Mola_mola
ENSPNAG00000025732	p4ha1a	98	76.866	ENSMALG00000013083	-	99	78.000	Monopterus_albus
ENSPNAG00000025732	p4ha1a	97	70.544	ENSORLG00000014906	-	94	70.544	Oryzias_latipes
ENSPNAG00000025732	p4ha1a	98	73.606	ENSORLG00020015227	-	97	73.606	Oryzias_latipes_hni
ENSPNAG00000025732	p4ha1a	98	73.420	ENSORLG00015012970	-	97	73.420	Oryzias_latipes_hsok
ENSPNAG00000025732	p4ha1a	98	74.624	ENSOMEG00000019702	-	99	74.436	Oryzias_melastigma
ENSPNAG00000025732	p4ha1a	99	82.959	ENSPKIG00000002519	p4ha1a	99	82.959	Paramormyrops_kingsleyae
ENSPNAG00000025732	p4ha1a	99	73.134	ENSPREG00000016136	p4ha1a	99	72.761	Poecilia_reticulata
ENSPNAG00000025732	p4ha1a	96	82.950	ENSSFOG00015009731	p4ha1	100	82.169	Scleropages_formosus
ENSPNAG00000025732	p4ha1a	99	71.322	ENSTNIG00000003570	-	99	71.136	Tetraodon_nigroviridis