EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000026263 (Gene tree)
Gene ID: 108427170
Gene Symbol: POLR2E
Alias: RPABC1|RPB5|XAP4|hRPB25|hsRPB5
Full Name: RNA polymerase II subunit E
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 9062 bases
Position: chrKV575334.1:1504906-1513967
Accession: 108427170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000035885	RNA_pol_Rpb5_N	PF03871.14	7.2e-35	1	1
ENSPNAP00000035890	RNA_pol_Rpb5_N	PF03871.14	9.3e-35	1	1
ENSPNAP00000035890	RNA_pol_Rpb5_C	PF01191.19	1.1e-34	1	1
ENSPNAP00000035885	RNA_pol_Rpb5_C	PF01191.19	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000029531	POLR2E-201	552	-	ENSPNAP00000035885	183 (aa)	-	-
ENSPNAT00000029532	POLR2E-202	3395	XM_017697139	ENSPNAP00000035890	210 (aa)	XP_017552628	UPI000814438E

Gene Model

Click here to download ENSPNAG00000026263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000026263's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000026263	POLR2E	100	95.238	ENSG00000099817	POLR2E	100	95.238	Homo_sapiens
ENSPNAG00000026263	POLR2E	100	99.048	ENSAPOG00000002935	polr2eb	100	99.048	Acanthochromis_polyacanthus
ENSPNAG00000026263	POLR2E	100	95.714	ENSAMEG00000003159	POLR2E	100	95.714	Ailuropoda_melanoleuca
ENSPNAG00000026263	POLR2E	100	98.361	ENSACIG00000024371	polr2eb	100	98.361	Amphilophus_citrinellus
ENSPNAG00000026263	POLR2E	100	99.048	ENSAOCG00000018166	polr2eb	100	99.048	Amphiprion_ocellaris
ENSPNAG00000026263	POLR2E	100	99.048	ENSAPEG00000009000	polr2eb	100	99.048	Amphiprion_percula
ENSPNAG00000026263	POLR2E	100	99.048	ENSATEG00000023760	polr2eb	100	99.048	Anabas_testudineus
ENSPNAG00000026263	POLR2E	100	95.714	ENSANAG00000038488	POLR2E	100	95.714	Aotus_nancymaae
ENSPNAG00000026263	POLR2E	100	98.571	ENSACLG00000005254	polr2eb	100	98.571	Astatotilapia_calliptera
ENSPNAG00000026263	POLR2E	100	99.524	ENSAMXG00000018915	POLR2E	100	99.524	Astyanax_mexicanus
ENSPNAG00000026263	POLR2E	100	95.714	ENSBTAG00000020776	POLR2E	100	95.714	Bos_taurus
ENSPNAG00000026263	POLR2E	99	78.846	WBGene00019246	rpb-5	99	78.846	Caenorhabditis_elegans
ENSPNAG00000026263	POLR2E	67	90.714	ENSCJAG00000007666	-	77	90.714	Callithrix_jacchus
ENSPNAG00000026263	POLR2E	100	92.381	ENSCAFG00000019546	POLR2E	100	92.381	Canis_familiaris
ENSPNAG00000026263	POLR2E	100	95.714	ENSCAFG00020017111	POLR2E	100	95.714	Canis_lupus_dingo
ENSPNAG00000026263	POLR2E	100	95.714	ENSCHIG00000014151	POLR2E	100	95.714	Capra_hircus
ENSPNAG00000026263	POLR2E	100	79.048	ENSTSYG00000026377	POLR2E	100	79.048	Carlito_syrichta
ENSPNAG00000026263	POLR2E	91	95.312	ENSCAPG00000010843	POLR2E	93	95.312	Cavia_aperea
ENSPNAG00000026263	POLR2E	100	95.714	ENSCPOG00000001542	POLR2E	100	95.714	Cavia_porcellus
ENSPNAG00000026263	POLR2E	100	95.714	ENSCCAG00000025658	POLR2E	100	95.714	Cebus_capucinus
ENSPNAG00000026263	POLR2E	100	95.714	ENSCATG00000008926	POLR2E	100	95.714	Cercocebus_atys
ENSPNAG00000026263	POLR2E	98	73.659	ENSCLAG00000009238	-	100	73.659	Chinchilla_lanigera
ENSPNAG00000026263	POLR2E	100	96.190	ENSCLAG00000014874	-	100	96.190	Chinchilla_lanigera
ENSPNAG00000026263	POLR2E	100	95.714	ENSCSAG00000012336	POLR2E	100	95.714	Chlorocebus_sabaeus
ENSPNAG00000026263	POLR2E	100	96.190	ENSCPBG00000009702	POLR2E	100	96.190	Chrysemys_picta_bellii
ENSPNAG00000026263	POLR2E	100	85.714	ENSCING00000024933	-	99	85.714	Ciona_intestinalis
ENSPNAG00000026263	POLR2E	100	95.714	ENSCANG00000025560	POLR2E	100	95.714	Colobus_angolensis_palliatus
ENSPNAG00000026263	POLR2E	100	95.714	ENSCGRG00001022927	Polr2e	100	95.714	Cricetulus_griseus_chok1gshd
ENSPNAG00000026263	POLR2E	100	89.767	ENSCGRG00000016441	Polr2e	100	89.767	Cricetulus_griseus_crigri
ENSPNAG00000026263	POLR2E	100	97.143	ENSCSEG00000007107	polr2eb	100	96.721	Cynoglossus_semilaevis
ENSPNAG00000026263	POLR2E	100	99.048	ENSCVAG00000019940	polr2eb	100	99.048	Cyprinodon_variegatus
ENSPNAG00000026263	POLR2E	100	98.095	ENSDARG00000026183	polr2eb	100	98.095	Danio_rerio
ENSPNAG00000026263	POLR2E	90	95.263	ENSDNOG00000044994	POLR2E	84	95.263	Dasypus_novemcinctus
ENSPNAG00000026263	POLR2E	100	95.714	ENSDORG00000001154	Polr2e	100	95.714	Dipodomys_ordii
ENSPNAG00000026263	POLR2E	99	85.167	FBgn0033571	Rpb5	99	85.167	Drosophila_melanogaster
ENSPNAG00000026263	POLR2E	75	91.720	ENSEBUG00000010159	-	76	91.720	Eptatretus_burgeri
ENSPNAG00000026263	POLR2E	69	88.966	ENSEASG00005021615	POLR2E	67	83.333	Equus_asinus_asinus
ENSPNAG00000026263	POLR2E	100	95.082	ENSECAG00000011124	POLR2E	100	95.082	Equus_caballus
ENSPNAG00000026263	POLR2E	100	97.619	ENSELUG00000005815	POLR2E	100	97.619	Esox_lucius
ENSPNAG00000026263	POLR2E	100	96.667	ENSELUG00000020646	polr2e	100	96.667	Esox_lucius
ENSPNAG00000026263	POLR2E	100	95.238	ENSFCAG00000007318	POLR2E	100	95.238	Felis_catus
ENSPNAG00000026263	POLR2E	91	95.833	ENSFALG00000013986	POLR2E	99	95.833	Ficedula_albicollis
ENSPNAG00000026263	POLR2E	100	95.714	ENSFDAG00000014539	POLR2E	100	95.714	Fukomys_damarensis
ENSPNAG00000026263	POLR2E	100	99.048	ENSFHEG00000022398	polr2eb	100	99.048	Fundulus_heteroclitus
ENSPNAG00000026263	POLR2E	100	98.095	ENSGMOG00000007615	polr2eb	100	98.095	Gadus_morhua
ENSPNAG00000026263	POLR2E	100	96.190	ENSGALG00000002591	POLR2E	100	96.190	Gallus_gallus
ENSPNAG00000026263	POLR2E	100	98.571	ENSGAFG00000005087	polr2eb	100	98.571	Gambusia_affinis
ENSPNAG00000026263	POLR2E	100	98.095	ENSGACG00000013247	polr2eb	100	98.095	Gasterosteus_aculeatus
ENSPNAG00000026263	POLR2E	100	96.190	ENSGAGG00000008356	POLR2E	100	96.190	Gopherus_agassizii
ENSPNAG00000026263	POLR2E	100	95.714	ENSGGOG00000011267	POLR2E	100	95.714	Gorilla_gorilla
ENSPNAG00000026263	POLR2E	68	93.662	ENSHBUG00000011099	polr2eb	100	93.662	Haplochromis_burtoni
ENSPNAG00000026263	POLR2E	100	95.714	ENSHGLG00000013330	POLR2E	100	95.714	Heterocephalus_glaber_female
ENSPNAG00000026263	POLR2E	100	95.714	ENSHGLG00100011014	POLR2E	100	95.714	Heterocephalus_glaber_male
ENSPNAG00000026263	POLR2E	53	96.429	ENSHCOG00000012099	-	88	96.429	Hippocampus_comes
ENSPNAG00000026263	POLR2E	100	97.619	ENSHCOG00000000906	polr2eb	100	97.619	Hippocampus_comes
ENSPNAG00000026263	POLR2E	100	99.048	ENSIPUG00000019801	polr2e	100	99.048	Ictalurus_punctatus
ENSPNAG00000026263	POLR2E	100	95.714	ENSSTOG00000002853	POLR2E	100	95.714	Ictidomys_tridecemlineatus
ENSPNAG00000026263	POLR2E	77	78.261	ENSJJAG00000015812	-	100	78.261	Jaculus_jaculus
ENSPNAG00000026263	POLR2E	100	95.714	ENSJJAG00000016595	-	100	95.714	Jaculus_jaculus
ENSPNAG00000026263	POLR2E	100	89.071	ENSJJAG00000003145	-	100	89.071	Jaculus_jaculus
ENSPNAG00000026263	POLR2E	100	99.048	ENSKMAG00000005954	polr2eb	100	99.048	Kryptolebias_marmoratus
ENSPNAG00000026263	POLR2E	100	99.048	ENSLBEG00000024802	polr2eb	100	99.048	Labrus_bergylta
ENSPNAG00000026263	POLR2E	100	95.714	ENSLACG00000013686	POLR2E	100	95.714	Latimeria_chalumnae
ENSPNAG00000026263	POLR2E	77	98.765	ENSLOCG00000004599	POLR2E	100	98.765	Lepisosteus_oculatus
ENSPNAG00000026263	POLR2E	100	76.415	ENSLAFG00000025587	POLR2E	100	76.415	Loxodonta_africana
ENSPNAG00000026263	POLR2E	100	95.714	ENSMFAG00000002884	POLR2E	100	95.714	Macaca_fascicularis
ENSPNAG00000026263	POLR2E	100	95.714	ENSMMUG00000013927	POLR2E	100	95.714	Macaca_mulatta
ENSPNAG00000026263	POLR2E	100	95.714	ENSMNEG00000034046	-	100	95.714	Macaca_nemestrina
ENSPNAG00000026263	POLR2E	100	64.455	ENSMNEG00000033452	-	100	64.455	Macaca_nemestrina
ENSPNAG00000026263	POLR2E	92	78.756	ENSMLEG00000012405	POLR2E	94	78.756	Mandrillus_leucophaeus
ENSPNAG00000026263	POLR2E	100	99.048	ENSMAMG00000018703	polr2eb	100	99.048	Mastacembelus_armatus
ENSPNAG00000026263	POLR2E	100	98.361	ENSMZEG00005010796	polr2eb	100	98.361	Maylandia_zebra
ENSPNAG00000026263	POLR2E	100	95.261	ENSMGAG00000003769	POLR2E	100	95.261	Meleagris_gallopavo
ENSPNAG00000026263	POLR2E	92	94.819	ENSMAUG00000010125	-	100	95.288	Mesocricetus_auratus
ENSPNAG00000026263	POLR2E	100	64.762	ENSMAUG00000011003	-	100	64.762	Mesocricetus_auratus
ENSPNAG00000026263	POLR2E	100	95.714	ENSMICG00000013063	POLR2E	100	95.714	Microcebus_murinus
ENSPNAG00000026263	POLR2E	100	95.714	ENSMOCG00000013414	Polr2e	100	95.714	Microtus_ochrogaster
ENSPNAG00000026263	POLR2E	91	87.958	ENSMMOG00000001167	polr2eb	88	87.958	Mola_mola
ENSPNAG00000026263	POLR2E	100	96.721	ENSMMOG00000001161	polr2eb	100	96.721	Mola_mola
ENSPNAG00000026263	POLR2E	100	96.190	ENSMODG00000005494	POLR2E	100	96.190	Monodelphis_domestica
ENSPNAG00000026263	POLR2E	100	98.095	ENSMALG00000021888	polr2eb	100	98.095	Monopterus_albus
ENSPNAG00000026263	POLR2E	100	95.714	MGP_CAROLIEiJ_G0015561	Polr2e	100	95.714	Mus_caroli
ENSPNAG00000026263	POLR2E	100	95.714	ENSMUSG00000004667	Polr2e	100	95.714	Mus_musculus
ENSPNAG00000026263	POLR2E	100	95.714	MGP_PahariEiJ_G0030974	Polr2e	100	95.714	Mus_pahari
ENSPNAG00000026263	POLR2E	100	95.714	MGP_SPRETEiJ_G0016379	Polr2e	100	95.714	Mus_spretus
ENSPNAG00000026263	POLR2E	100	94.762	ENSMPUG00000008953	POLR2E	100	94.762	Mustela_putorius_furo
ENSPNAG00000026263	POLR2E	100	95.714	ENSMLUG00000013193	POLR2E	100	95.714	Myotis_lucifugus
ENSPNAG00000026263	POLR2E	66	90.580	ENSMLUG00000006376	-	100	79.630	Myotis_lucifugus
ENSPNAG00000026263	POLR2E	85	72.626	ENSNGAG00000017344	-	96	72.626	Nannospalax_galili
ENSPNAG00000026263	POLR2E	100	95.714	ENSNGAG00000001147	Polr2e	100	95.714	Nannospalax_galili
ENSPNAG00000026263	POLR2E	100	98.361	ENSNBRG00000022772	polr2eb	100	98.361	Neolamprologus_brichardi
ENSPNAG00000026263	POLR2E	100	73.333	ENSNLEG00000031364	-	100	73.333	Nomascus_leucogenys
ENSPNAG00000026263	POLR2E	100	91.943	ENSNLEG00000001207	-	100	91.943	Nomascus_leucogenys
ENSPNAG00000026263	POLR2E	100	84.286	ENSOPRG00000008331	POLR2E	100	84.286	Ochotona_princeps
ENSPNAG00000026263	POLR2E	100	71.354	ENSODEG00000011490	-	100	71.354	Octodon_degus
ENSPNAG00000026263	POLR2E	89	84.946	ENSODEG00000007985	-	100	84.946	Octodon_degus
ENSPNAG00000026263	POLR2E	100	95.714	ENSODEG00000013230	-	100	95.714	Octodon_degus
ENSPNAG00000026263	POLR2E	100	98.095	ENSONIG00000002519	polr2eb	100	98.095	Oreochromis_niloticus
ENSPNAG00000026263	POLR2E	100	98.571	ENSORLG00000015346	polr2eb	100	98.571	Oryzias_latipes
ENSPNAG00000026263	POLR2E	100	98.571	ENSORLG00020020700	polr2e	100	98.571	Oryzias_latipes_hni
ENSPNAG00000026263	POLR2E	100	98.571	ENSORLG00015016842	polr2e	100	98.571	Oryzias_latipes_hsok
ENSPNAG00000026263	POLR2E	100	99.048	ENSOMEG00000002709	polr2eb	100	99.048	Oryzias_melastigma
ENSPNAG00000026263	POLR2E	100	95.714	ENSOGAG00000012311	POLR2E	100	95.714	Otolemur_garnettii
ENSPNAG00000026263	POLR2E	100	95.714	ENSOARG00000010994	POLR2E	100	95.714	Ovis_aries
ENSPNAG00000026263	POLR2E	91	95.288	ENSPPAG00000003145	POLR2E	100	95.288	Pan_paniscus
ENSPNAG00000026263	POLR2E	100	95.238	ENSPPRG00000000777	POLR2E	100	95.238	Panthera_pardus
ENSPNAG00000026263	POLR2E	90	84.848	ENSPTIG00000012237	POLR2E	98	89.474	Panthera_tigris_altaica
ENSPNAG00000026263	POLR2E	100	95.714	ENSPTRG00000010183	POLR2E	100	95.714	Pan_troglodytes
ENSPNAG00000026263	POLR2E	100	95.714	ENSPANG00000018011	POLR2E	100	95.714	Papio_anubis
ENSPNAG00000026263	POLR2E	100	97.619	ENSPKIG00000009607	POLR2E	100	97.619	Paramormyrops_kingsleyae
ENSPNAG00000026263	POLR2E	100	98.571	ENSPKIG00000024123	POLR2E	100	98.571	Paramormyrops_kingsleyae
ENSPNAG00000026263	POLR2E	98	92.195	ENSPSIG00000002870	POLR2E	99	92.195	Pelodiscus_sinensis
ENSPNAG00000026263	POLR2E	100	98.907	ENSPMGG00000014354	polr2eb	100	98.907	Periophthalmus_magnuspinnatus
ENSPNAG00000026263	POLR2E	100	95.714	ENSPEMG00000023261	Polr2e	100	95.714	Peromyscus_maniculatus_bairdii
ENSPNAG00000026263	POLR2E	90	95.767	ENSPCIG00000007312	POLR2E	75	95.767	Phascolarctos_cinereus
ENSPNAG00000026263	POLR2E	100	98.571	ENSPFOG00000005734	polr2eb	100	98.571	Poecilia_formosa
ENSPNAG00000026263	POLR2E	100	98.571	ENSPLAG00000014496	polr2eb	100	98.571	Poecilia_latipinna
ENSPNAG00000026263	POLR2E	100	98.571	ENSPMEG00000008053	polr2eb	100	98.571	Poecilia_mexicana
ENSPNAG00000026263	POLR2E	100	98.571	ENSPREG00000006489	polr2eb	100	98.571	Poecilia_reticulata
ENSPNAG00000026263	POLR2E	100	88.626	ENSPPYG00000009305	POLR2E	100	88.626	Pongo_abelii
ENSPNAG00000026263	POLR2E	53	93.694	ENSPCAG00000016605	POLR2E	100	93.694	Procavia_capensis
ENSPNAG00000026263	POLR2E	100	95.714	ENSPCOG00000014491	POLR2E	100	95.714	Propithecus_coquereli
ENSPNAG00000026263	POLR2E	75	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSPNAG00000026263	POLR2E	90	98.421	ENSPNYG00000019797	polr2eb	96	98.421	Pundamilia_nyererei
ENSPNAG00000026263	POLR2E	100	95.714	ENSRNOG00000013545	Polr2e	100	95.714	Rattus_norvegicus
ENSPNAG00000026263	POLR2E	100	95.714	ENSRBIG00000028726	-	100	95.714	Rhinopithecus_bieti
ENSPNAG00000026263	POLR2E	100	70.616	ENSRBIG00000027259	-	100	70.616	Rhinopithecus_bieti
ENSPNAG00000026263	POLR2E	100	95.714	ENSRROG00000043763	POLR2E	100	95.714	Rhinopithecus_roxellana
ENSPNAG00000026263	POLR2E	99	44.495	YBR154C	RPB5	98	44.495	Saccharomyces_cerevisiae
ENSPNAG00000026263	POLR2E	100	95.714	ENSSBOG00000027241	POLR2E	100	95.714	Saimiri_boliviensis_boliviensis
ENSPNAG00000026263	POLR2E	100	96.190	ENSSHAG00000010690	POLR2E	100	96.190	Sarcophilus_harrisii
ENSPNAG00000026263	POLR2E	100	99.048	ENSSFOG00015006073	polr2e	100	99.048	Scleropages_formosus
ENSPNAG00000026263	POLR2E	100	99.048	ENSSMAG00000012782	polr2eb	100	99.048	Scophthalmus_maximus
ENSPNAG00000026263	POLR2E	100	99.048	ENSSDUG00000003352	polr2eb	100	99.048	Seriola_dumerili
ENSPNAG00000026263	POLR2E	100	99.048	ENSSLDG00000004965	polr2eb	100	99.048	Seriola_lalandi_dorsalis
ENSPNAG00000026263	POLR2E	100	96.190	ENSSPUG00000006114	POLR2E	100	96.190	Sphenodon_punctatus
ENSPNAG00000026263	POLR2E	100	99.048	ENSSPAG00000017556	polr2eb	100	99.048	Stegastes_partitus
ENSPNAG00000026263	POLR2E	100	95.714	ENSSSCG00000021472	POLR2E	100	95.714	Sus_scrofa
ENSPNAG00000026263	POLR2E	75	84.783	ENSTGUG00000000922	POLR2E	99	87.857	Taeniopygia_guttata
ENSPNAG00000026263	POLR2E	100	98.907	ENSTRUG00000018238	polr2eb	100	98.907	Takifugu_rubripes
ENSPNAG00000026263	POLR2E	100	99.048	ENSTNIG00000013187	polr2eb	100	99.048	Tetraodon_nigroviridis
ENSPNAG00000026263	POLR2E	100	95.238	ENSTTRG00000001484	POLR2E	100	95.238	Tursiops_truncatus
ENSPNAG00000026263	POLR2E	100	94.536	ENSUAMG00000009166	POLR2E	100	94.536	Ursus_americanus
ENSPNAG00000026263	POLR2E	100	95.714	ENSVVUG00000022818	POLR2E	54	95.714	Vulpes_vulpes
ENSPNAG00000026263	POLR2E	100	96.190	ENSXETG00000003291	polr2e	100	96.190	Xenopus_tropicalis
ENSPNAG00000026263	POLR2E	100	98.361	ENSXCOG00000009197	polr2eb	100	98.361	Xiphophorus_couchianus
ENSPNAG00000026263	POLR2E	100	98.571	ENSXMAG00000026495	polr2eb	100	98.571	Xiphophorus_maculatus