EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000026460 (Gene tree)
Gene ID: 108424206
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 6349 bases
Position: chrKV575307.1:2869417-2875765
Accession: 108424206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000036000	Clp1	PF06807.14	8.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000029826	-	2150	XM_017692074	ENSPNAP00000036000	445 (aa)	XP_017547563	UPI000814936B

Gene Model

Click here to download ENSPNAG00000026460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000026460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000026460	clp1	98	78.161	ENSG00000172409	CLP1	97	80.000	Homo_sapiens
ENSPNAG00000026460	clp1	100	86.384	ENSAPOG00000008242	clp1	100	85.714	Acanthochromis_polyacanthus
ENSPNAG00000026460	clp1	99	78.182	ENSAMEG00000014551	CLP1	99	77.955	Ailuropoda_melanoleuca
ENSPNAG00000026460	clp1	100	85.714	ENSACIG00000006310	clp1	99	84.821	Amphilophus_citrinellus
ENSPNAG00000026460	clp1	100	86.384	ENSAOCG00000010681	clp1	98	89.362	Amphiprion_ocellaris
ENSPNAG00000026460	clp1	100	86.384	ENSAPEG00000012165	clp1	98	89.362	Amphiprion_percula
ENSPNAG00000026460	clp1	100	85.938	ENSATEG00000012374	clp1	100	85.268	Anabas_testudineus
ENSPNAG00000026460	clp1	94	79.524	ENSACAG00000007139	CLP1	97	79.524	Anolis_carolinensis
ENSPNAG00000026460	clp1	98	78.161	ENSANAG00000034935	CLP1	97	80.000	Aotus_nancymaae
ENSPNAG00000026460	clp1	100	85.491	ENSACLG00000013573	clp1	100	84.821	Astatotilapia_calliptera
ENSPNAG00000026460	clp1	100	95.730	ENSAMXG00000014194	clp1	100	95.730	Astyanax_mexicanus
ENSPNAG00000026460	clp1	95	80.285	ENSBTAG00000006493	CLP1	97	80.238	Bos_taurus
ENSPNAG00000026460	clp1	94	47.518	WBGene00010304	clpf-1	97	47.518	Caenorhabditis_elegans
ENSPNAG00000026460	clp1	98	78.161	ENSCJAG00000008748	CLP1	97	80.000	Callithrix_jacchus
ENSPNAG00000026460	clp1	95	80.285	ENSCAFG00000007815	CLP1	97	80.238	Canis_familiaris
ENSPNAG00000026460	clp1	95	80.285	ENSCAFG00020000903	CLP1	97	80.238	Canis_lupus_dingo
ENSPNAG00000026460	clp1	95	80.285	ENSCHIG00000023497	CLP1	97	80.238	Capra_hircus
ENSPNAG00000026460	clp1	99	78.182	ENSTSYG00000006824	CLP1	99	77.955	Carlito_syrichta
ENSPNAG00000026460	clp1	95	80.048	ENSCAPG00000009703	CLP1	97	80.000	Cavia_aperea
ENSPNAG00000026460	clp1	95	80.048	ENSCPOG00000012554	CLP1	99	80.000	Cavia_porcellus
ENSPNAG00000026460	clp1	95	79.810	ENSCCAG00000031957	CLP1	97	79.762	Cebus_capucinus
ENSPNAG00000026460	clp1	100	77.079	ENSCATG00000044628	CLP1	97	80.000	Cercocebus_atys
ENSPNAG00000026460	clp1	95	80.048	ENSCLAG00000004094	CLP1	97	80.000	Chinchilla_lanigera
ENSPNAG00000026460	clp1	95	80.048	ENSCSAG00000005994	CLP1	97	80.000	Chlorocebus_sabaeus
ENSPNAG00000026460	clp1	94	79.762	ENSCPBG00000016843	CLP1	97	79.762	Chrysemys_picta_bellii
ENSPNAG00000026460	clp1	94	62.291	ENSCING00000003779	-	96	62.291	Ciona_intestinalis
ENSPNAG00000026460	clp1	94	62.201	ENSCSAVG00000003437	-	96	62.201	Ciona_savignyi
ENSPNAG00000026460	clp1	98	78.161	ENSCANG00000034335	CLP1	97	80.000	Colobus_angolensis_palliatus
ENSPNAG00000026460	clp1	95	80.048	ENSCGRG00001002227	CLP1	97	80.000	Cricetulus_griseus_chok1gshd
ENSPNAG00000026460	clp1	95	80.048	ENSCGRG00000004328	CLP1	97	80.000	Cricetulus_griseus_crigri
ENSPNAG00000026460	clp1	100	83.705	ENSCSEG00000008614	clp1	95	86.998	Cynoglossus_semilaevis
ENSPNAG00000026460	clp1	100	84.821	ENSCVAG00000020101	clp1	100	84.375	Cyprinodon_variegatus
ENSPNAG00000026460	clp1	100	93.034	ENSDARG00000063663	clp1	100	93.034	Danio_rerio
ENSPNAG00000026460	clp1	94	80.000	ENSDNOG00000042415	CLP1	87	79.952	Dasypus_novemcinctus
ENSPNAG00000026460	clp1	95	80.285	ENSDORG00000014685	Clp1	97	80.238	Dipodomys_ordii
ENSPNAG00000026460	clp1	94	53.647	FBgn0033842	cbc	97	53.791	Drosophila_melanogaster
ENSPNAG00000026460	clp1	95	80.048	ENSETEG00000003009	CLP1	97	80.000	Echinops_telfairi
ENSPNAG00000026460	clp1	96	67.213	ENSEBUG00000011648	clp1	97	67.696	Eptatretus_burgeri
ENSPNAG00000026460	clp1	95	80.048	ENSEASG00005002093	CLP1	97	80.000	Equus_asinus_asinus
ENSPNAG00000026460	clp1	99	77.955	ENSECAG00000011597	CLP1	97	80.000	Equus_caballus
ENSPNAG00000026460	clp1	95	79.572	ENSEEUG00000012771	CLP1	97	79.524	Erinaceus_europaeus
ENSPNAG00000026460	clp1	95	91.924	ENSELUG00000024048	clp1	100	88.764	Esox_lucius
ENSPNAG00000026460	clp1	99	78.182	ENSFCAG00000006633	CLP1	97	80.238	Felis_catus
ENSPNAG00000026460	clp1	94	79.762	ENSFALG00000011145	CLP1	97	79.762	Ficedula_albicollis
ENSPNAG00000026460	clp1	95	80.048	ENSFDAG00000000234	CLP1	97	80.000	Fukomys_damarensis
ENSPNAG00000026460	clp1	100	84.821	ENSFHEG00000014760	CLP1	100	84.375	Fundulus_heteroclitus
ENSPNAG00000026460	clp1	100	91.236	ENSGMOG00000019340	clp1	100	90.337	Gadus_morhua
ENSPNAG00000026460	clp1	94	79.762	ENSGALG00000007370	CLP1	97	79.762	Gallus_gallus
ENSPNAG00000026460	clp1	100	85.045	ENSGAFG00000003020	clp1	97	88.180	Gambusia_affinis
ENSPNAG00000026460	clp1	100	85.938	ENSGACG00000017832	clp1	100	85.268	Gasterosteus_aculeatus
ENSPNAG00000026460	clp1	94	79.762	ENSGAGG00000013279	CLP1	97	79.762	Gopherus_agassizii
ENSPNAG00000026460	clp1	98	78.161	ENSGGOG00000023006	CLP1	97	80.000	Gorilla_gorilla
ENSPNAG00000026460	clp1	100	85.714	ENSHBUG00000010436	clp1	100	85.045	Haplochromis_burtoni
ENSPNAG00000026460	clp1	95	80.048	ENSHGLG00000009914	CLP1	97	80.000	Heterocephalus_glaber_female
ENSPNAG00000026460	clp1	95	80.048	ENSHGLG00100006105	CLP1	97	80.000	Heterocephalus_glaber_male
ENSPNAG00000026460	clp1	100	86.161	ENSHCOG00000010072	clp1	100	85.491	Hippocampus_comes
ENSPNAG00000026460	clp1	100	94.395	ENSIPUG00000016238	clp1	99	93.722	Ictalurus_punctatus
ENSPNAG00000026460	clp1	95	80.285	ENSSTOG00000029257	CLP1	97	80.238	Ictidomys_tridecemlineatus
ENSPNAG00000026460	clp1	95	80.048	ENSJJAG00000023691	Clp1	97	80.000	Jaculus_jaculus
ENSPNAG00000026460	clp1	100	85.268	ENSKMAG00000011990	clp1	100	84.821	Kryptolebias_marmoratus
ENSPNAG00000026460	clp1	100	86.384	ENSLBEG00000010201	clp1	100	85.714	Labrus_bergylta
ENSPNAG00000026460	clp1	95	78.622	ENSLACG00000003160	CLP1	97	78.810	Latimeria_chalumnae
ENSPNAG00000026460	clp1	71	89.130	ENSLOCG00000008074	clp1	100	89.441	Lepisosteus_oculatus
ENSPNAG00000026460	clp1	95	79.810	ENSLAFG00000014907	CLP1	97	79.762	Loxodonta_africana
ENSPNAG00000026460	clp1	98	78.161	ENSMFAG00000046074	CLP1	97	80.000	Macaca_fascicularis
ENSPNAG00000026460	clp1	98	78.161	ENSMMUG00000038007	CLP1	96	80.000	Macaca_mulatta
ENSPNAG00000026460	clp1	95	80.048	ENSMNEG00000000259	CLP1	97	80.000	Macaca_nemestrina
ENSPNAG00000026460	clp1	100	77.079	ENSMLEG00000043556	CLP1	97	80.000	Mandrillus_leucophaeus
ENSPNAG00000026460	clp1	100	86.607	ENSMAMG00000002149	clp1	100	85.938	Mastacembelus_armatus
ENSPNAG00000026460	clp1	100	85.491	ENSMZEG00005002850	clp1	100	84.821	Maylandia_zebra
ENSPNAG00000026460	clp1	94	79.762	ENSMGAG00000009643	CLP1	97	79.762	Meleagris_gallopavo
ENSPNAG00000026460	clp1	94	79.762	ENSMAUG00000016261	Clp1	97	79.762	Mesocricetus_auratus
ENSPNAG00000026460	clp1	99	77.652	ENSMICG00000004895	CLP1	97	80.238	Microcebus_murinus
ENSPNAG00000026460	clp1	95	80.285	ENSMOCG00000005498	Clp1	97	80.238	Microtus_ochrogaster
ENSPNAG00000026460	clp1	96	87.383	ENSMMOG00000003229	clp1	95	87.943	Mola_mola
ENSPNAG00000026460	clp1	94	80.476	ENSMODG00000024148	-	97	80.476	Monodelphis_domestica
ENSPNAG00000026460	clp1	94	80.476	ENSMODG00000020107	-	97	80.476	Monodelphis_domestica
ENSPNAG00000026460	clp1	100	86.384	ENSMALG00000014239	clp1	95	89.835	Monopterus_albus
ENSPNAG00000026460	clp1	95	80.048	MGP_CAROLIEiJ_G0023726	Clp1	97	80.000	Mus_caroli
ENSPNAG00000026460	clp1	95	80.048	ENSMUSG00000027079	Clp1	97	80.000	Mus_musculus
ENSPNAG00000026460	clp1	95	80.048	MGP_PahariEiJ_G0025177	Clp1	97	80.000	Mus_pahari
ENSPNAG00000026460	clp1	95	80.048	MGP_SPRETEiJ_G0024646	Clp1	97	80.000	Mus_spretus
ENSPNAG00000026460	clp1	95	80.285	ENSMPUG00000000268	CLP1	97	80.238	Mustela_putorius_furo
ENSPNAG00000026460	clp1	95	80.285	ENSMLUG00000007904	CLP1	97	80.238	Myotis_lucifugus
ENSPNAG00000026460	clp1	95	80.048	ENSNGAG00000006165	Clp1	97	80.000	Nannospalax_galili
ENSPNAG00000026460	clp1	100	85.714	ENSNBRG00000005225	clp1	100	85.045	Neolamprologus_brichardi
ENSPNAG00000026460	clp1	77	76.190	ENSNLEG00000012809	-	96	75.904	Nomascus_leucogenys
ENSPNAG00000026460	clp1	95	80.285	ENSMEUG00000010949	CLP1	97	80.238	Notamacropus_eugenii
ENSPNAG00000026460	clp1	69	80.392	ENSOPRG00000007329	CLP1	100	80.392	Ochotona_princeps
ENSPNAG00000026460	clp1	95	80.048	ENSODEG00000011410	CLP1	97	80.000	Octodon_degus
ENSPNAG00000026460	clp1	100	85.491	ENSONIG00000005089	clp1	100	84.821	Oreochromis_niloticus
ENSPNAG00000026460	clp1	95	80.285	ENSOCUG00000007045	CLP1	97	80.238	Oryctolagus_cuniculus
ENSPNAG00000026460	clp1	100	84.598	ENSORLG00000003647	clp1	100	84.152	Oryzias_latipes
ENSPNAG00000026460	clp1	100	84.375	ENSORLG00020016676	clp1	100	83.929	Oryzias_latipes_hni
ENSPNAG00000026460	clp1	100	84.598	ENSORLG00015019484	clp1	100	84.152	Oryzias_latipes_hsok
ENSPNAG00000026460	clp1	100	85.268	ENSOMEG00000021303	clp1	100	84.821	Oryzias_melastigma
ENSPNAG00000026460	clp1	95	80.285	ENSOGAG00000004508	CLP1	97	80.238	Otolemur_garnettii
ENSPNAG00000026460	clp1	95	79.097	ENSOARG00000010145	CLP1	95	79.048	Ovis_aries
ENSPNAG00000026460	clp1	98	78.161	ENSPPAG00000041519	CLP1	97	80.000	Pan_paniscus
ENSPNAG00000026460	clp1	95	80.285	ENSPPRG00000006135	CLP1	97	80.238	Panthera_pardus
ENSPNAG00000026460	clp1	95	80.285	ENSPTIG00000015866	CLP1	97	80.238	Panthera_tigris_altaica
ENSPNAG00000026460	clp1	95	80.048	ENSPTRG00000047318	CLP1	97	80.000	Pan_troglodytes
ENSPNAG00000026460	clp1	100	77.079	ENSPANG00000017078	CLP1	99	76.854	Papio_anubis
ENSPNAG00000026460	clp1	100	91.314	ENSPKIG00000007697	clp1	100	91.314	Paramormyrops_kingsleyae
ENSPNAG00000026460	clp1	89	77.078	ENSPSIG00000005468	CLP1	97	77.078	Pelodiscus_sinensis
ENSPNAG00000026460	clp1	100	85.268	ENSPMGG00000012171	clp1	100	84.821	Periophthalmus_magnuspinnatus
ENSPNAG00000026460	clp1	95	80.285	ENSPEMG00000011213	-	97	80.238	Peromyscus_maniculatus_bairdii
ENSPNAG00000026460	clp1	94	69.121	ENSPMAG00000006707	clp1	97	69.121	Petromyzon_marinus
ENSPNAG00000026460	clp1	94	80.714	ENSPCIG00000011899	CLP1	97	80.714	Phascolarctos_cinereus
ENSPNAG00000026460	clp1	100	85.268	ENSPFOG00000008169	clp1	100	85.045	Poecilia_formosa
ENSPNAG00000026460	clp1	100	85.268	ENSPLAG00000022388	clp1	97	88.652	Poecilia_latipinna
ENSPNAG00000026460	clp1	100	85.268	ENSPMEG00000021088	clp1	97	88.652	Poecilia_mexicana
ENSPNAG00000026460	clp1	100	85.491	ENSPREG00000017802	clp1	100	85.045	Poecilia_reticulata
ENSPNAG00000026460	clp1	52	76.724	ENSPPYG00000003266	-	100	76.724	Pongo_abelii
ENSPNAG00000026460	clp1	99	78.182	ENSPCOG00000000360	CLP1	99	77.955	Propithecus_coquereli
ENSPNAG00000026460	clp1	95	80.285	ENSPVAG00000016270	CLP1	97	80.238	Pteropus_vampyrus
ENSPNAG00000026460	clp1	100	85.714	ENSPNYG00000017274	clp1	99	85.045	Pundamilia_nyererei
ENSPNAG00000026460	clp1	95	80.048	ENSRNOG00000007416	Clp1	97	80.000	Rattus_norvegicus
ENSPNAG00000026460	clp1	95	80.048	ENSRBIG00000018191	CLP1	97	80.000	Rhinopithecus_bieti
ENSPNAG00000026460	clp1	98	78.161	ENSRROG00000039265	CLP1	97	80.000	Rhinopithecus_roxellana
ENSPNAG00000026460	clp1	93	64.976	ENSSBOG00000010558	-	93	64.976	Saimiri_boliviensis_boliviensis
ENSPNAG00000026460	clp1	95	80.048	ENSSBOG00000032517	-	97	80.000	Saimiri_boliviensis_boliviensis
ENSPNAG00000026460	clp1	95	80.523	ENSSHAG00000015695	CLP1	97	80.476	Sarcophilus_harrisii
ENSPNAG00000026460	clp1	100	88.889	ENSSFOG00015000628	clp1	100	88.889	Scleropages_formosus
ENSPNAG00000026460	clp1	100	86.161	ENSSMAG00000019423	clp1	99	85.491	Scophthalmus_maximus
ENSPNAG00000026460	clp1	100	86.830	ENSSDUG00000014495	clp1	100	85.938	Seriola_dumerili
ENSPNAG00000026460	clp1	100	86.607	ENSSLDG00000000937	clp1	100	85.714	Seriola_lalandi_dorsalis
ENSPNAG00000026460	clp1	52	76.623	ENSSARG00000002459	CLP1	100	76.623	Sorex_araneus
ENSPNAG00000026460	clp1	94	79.048	ENSSPUG00000016811	CLP1	97	79.048	Sphenodon_punctatus
ENSPNAG00000026460	clp1	100	86.384	ENSSPAG00000016052	clp1	100	85.491	Stegastes_partitus
ENSPNAG00000026460	clp1	95	80.285	ENSSSCG00000031442	CLP1	97	80.238	Sus_scrofa
ENSPNAG00000026460	clp1	94	79.762	ENSTGUG00000007002	CLP1	97	79.762	Taeniopygia_guttata
ENSPNAG00000026460	clp1	100	83.036	ENSTRUG00000012602	clp1	95	86.525	Takifugu_rubripes
ENSPNAG00000026460	clp1	100	82.366	ENSTNIG00000013125	clp1	100	81.696	Tetraodon_nigroviridis
ENSPNAG00000026460	clp1	94	79.762	ENSTBEG00000009975	CLP1	97	79.762	Tupaia_belangeri
ENSPNAG00000026460	clp1	95	80.523	ENSTTRG00000002096	CLP1	97	80.476	Tursiops_truncatus
ENSPNAG00000026460	clp1	95	80.285	ENSUAMG00000011388	CLP1	97	80.238	Ursus_americanus
ENSPNAG00000026460	clp1	95	80.285	ENSUMAG00000018317	CLP1	97	80.238	Ursus_maritimus
ENSPNAG00000026460	clp1	100	77.528	ENSVVUG00000017138	CLP1	99	77.303	Vulpes_vulpes
ENSPNAG00000026460	clp1	100	70.628	ENSXETG00000007088	clp1	95	73.810	Xenopus_tropicalis
ENSPNAG00000026460	clp1	100	85.268	ENSXCOG00000002287	clp1	100	84.821	Xiphophorus_couchianus
ENSPNAG00000026460	clp1	100	85.268	ENSXMAG00000009783	clp1	100	84.821	Xiphophorus_maculatus