EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000026728 (Gene tree)
Gene ID: 108426454
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 12047 bases
Position: chrKV575287.1:7959833-7971879
Accession: 108426454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000036076	PUF	PF00806.19	2.1e-69	1	8
ENSPNAP00000036076	PUF	PF00806.19	2.1e-69	2	8
ENSPNAP00000036076	PUF	PF00806.19	2.1e-69	3	8
ENSPNAP00000036076	PUF	PF00806.19	2.1e-69	4	8
ENSPNAP00000036076	PUF	PF00806.19	2.1e-69	5	8
ENSPNAP00000036076	PUF	PF00806.19	2.1e-69	6	8
ENSPNAP00000036076	PUF	PF00806.19	2.1e-69	7	8
ENSPNAP00000036076	PUF	PF00806.19	2.1e-69	8	8
ENSPNAP00000036092	PUF	PF00806.19	4.6e-69	1	8
ENSPNAP00000036092	PUF	PF00806.19	4.6e-69	2	8
ENSPNAP00000036092	PUF	PF00806.19	4.6e-69	3	8
ENSPNAP00000036092	PUF	PF00806.19	4.6e-69	4	8
ENSPNAP00000036092	PUF	PF00806.19	4.6e-69	5	8
ENSPNAP00000036092	PUF	PF00806.19	4.6e-69	6	8
ENSPNAP00000036092	PUF	PF00806.19	4.6e-69	7	8
ENSPNAP00000036092	PUF	PF00806.19	4.6e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000030043	-	5541	XM_017695926	ENSPNAP00000036092	1152 (aa)	XP_017551415	UPI000814AEAC
ENSPNAT00000039718	-	3165	-	ENSPNAP00000036076	1054 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000026728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000026728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000026728	pum1	95	64.964	ENSPNAG00000008025	pum2	93	64.954

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000026728	pum1	95	92.995	ENSG00000134644	PUM1	98	92.995	Homo_sapiens
ENSPNAG00000026728	pum1	100	82.773	ENSAPOG00000021632	pum1	100	96.145	Acanthochromis_polyacanthus
ENSPNAG00000026728	pum1	100	80.312	ENSAMEG00000017656	PUM1	97	78.798	Ailuropoda_melanoleuca
ENSPNAG00000026728	pum1	100	82.526	ENSACIG00000021013	pum1	100	82.624	Amphilophus_citrinellus
ENSPNAG00000026728	pum1	100	82.773	ENSAOCG00000003944	pum1	100	82.881	Amphiprion_ocellaris
ENSPNAG00000026728	pum1	100	82.773	ENSAPEG00000014550	pum1	100	82.881	Amphiprion_percula
ENSPNAG00000026728	pum1	100	82.458	ENSATEG00000016004	pum1	100	82.373	Anabas_testudineus
ENSPNAG00000026728	pum1	100	81.126	ENSAPLG00000009351	PUM1	100	80.033	Anas_platyrhynchos
ENSPNAG00000026728	pum1	100	80.230	ENSACAG00000000682	PUM1	98	79.397	Anolis_carolinensis
ENSPNAG00000026728	pum1	95	92.754	ENSANAG00000027865	PUM1	100	92.754	Aotus_nancymaae
ENSPNAG00000026728	pum1	91	83.209	ENSACLG00000019354	pum1	100	83.582	Astatotilapia_calliptera
ENSPNAG00000026728	pum1	100	98.925	ENSAMXG00000020607	pum1	96	98.872	Astyanax_mexicanus
ENSPNAG00000026728	pum1	95	93.478	ENSBTAG00000018979	PUM1	100	93.478	Bos_taurus
ENSPNAG00000026728	pum1	95	92.995	ENSCJAG00000006035	PUM1	100	92.995	Callithrix_jacchus
ENSPNAG00000026728	pum1	100	79.433	ENSCAFG00000011205	PUM1	100	76.762	Canis_familiaris
ENSPNAG00000026728	pum1	87	92.995	ENSCAFG00020024616	PUM1	98	92.995	Canis_lupus_dingo
ENSPNAG00000026728	pum1	95	92.995	ENSCHIG00000012952	PUM1	100	92.995	Capra_hircus
ENSPNAG00000026728	pum1	100	80.501	ENSTSYG00000008868	PUM1	100	83.816	Carlito_syrichta
ENSPNAG00000026728	pum1	100	80.396	ENSCPOG00000031613	PUM1	100	84.615	Cavia_porcellus
ENSPNAG00000026728	pum1	95	93.478	ENSCATG00000017991	PUM1	93	93.478	Cercocebus_atys
ENSPNAG00000026728	pum1	95	92.754	ENSCLAG00000007662	PUM1	100	92.754	Chinchilla_lanigera
ENSPNAG00000026728	pum1	100	79.175	ENSCSAG00000001028	PUM1	100	78.146	Chlorocebus_sabaeus
ENSPNAG00000026728	pum1	93	68.813	ENSCHOG00000010245	PUM1	93	68.526	Choloepus_hoffmanni
ENSPNAG00000026728	pum1	95	93.720	ENSCPBG00000009288	PUM1	100	85.484	Chrysemys_picta_bellii
ENSPNAG00000026728	pum1	95	92.995	ENSCANG00000042606	PUM1	100	92.995	Colobus_angolensis_palliatus
ENSPNAG00000026728	pum1	100	80.042	ENSCGRG00001024949	Pum1	100	84.224	Cricetulus_griseus_chok1gshd
ENSPNAG00000026728	pum1	100	80.042	ENSCGRG00000014197	Pum1	100	84.224	Cricetulus_griseus_crigri
ENSPNAG00000026728	pum1	91	82.369	ENSCSEG00000015981	pum1	100	83.489	Cynoglossus_semilaevis
ENSPNAG00000026728	pum1	100	81.828	ENSCVAG00000007043	pum1	100	81.695	Cyprinodon_variegatus
ENSPNAG00000026728	pum1	100	95.139	ENSDARG00000099256	pum1	100	95.139	Danio_rerio
ENSPNAG00000026728	pum1	100	80.605	ENSDNOG00000010939	PUM1	100	79.114	Dasypus_novemcinctus
ENSPNAG00000026728	pum1	89	75.291	ENSETEG00000004355	PUM1	87	76.260	Echinops_telfairi
ENSPNAG00000026728	pum1	100	80.480	ENSEASG00005010813	PUM1	100	79.097	Equus_asinus_asinus
ENSPNAG00000026728	pum1	100	80.396	ENSECAG00000021369	PUM1	100	78.947	Equus_caballus
ENSPNAG00000026728	pum1	77	92.889	ENSEEUG00000003871	PUM1	74	92.889	Erinaceus_europaeus
ENSPNAG00000026728	pum1	99	83.902	ENSELUG00000002409	pum1	100	86.951	Esox_lucius
ENSPNAG00000026728	pum1	95	93.478	ENSFCAG00000010374	PUM1	100	93.478	Felis_catus
ENSPNAG00000026728	pum1	100	80.913	ENSFALG00000001214	PUM1	97	78.952	Ficedula_albicollis
ENSPNAG00000026728	pum1	100	80.396	ENSFDAG00000011319	PUM1	100	84.615	Fukomys_damarensis
ENSPNAG00000026728	pum1	63	93.156	ENSGMOG00000010491	pum1	57	94.487	Gadus_morhua
ENSPNAG00000026728	pum1	96	92.727	ENSGALG00000042598	PUM1	98	93.333	Gallus_gallus
ENSPNAG00000026728	pum1	100	82.458	ENSGAFG00000015617	pum1	100	82.203	Gambusia_affinis
ENSPNAG00000026728	pum1	100	81.257	ENSGACG00000005717	pum1	100	81.942	Gasterosteus_aculeatus
ENSPNAG00000026728	pum1	96	92.929	ENSGAGG00000001290	PUM1	98	93.542	Gopherus_agassizii
ENSPNAG00000026728	pum1	95	92.995	ENSGGOG00000011983	PUM1	100	92.995	Gorilla_gorilla
ENSPNAG00000026728	pum1	100	82.458	ENSHBUG00000018718	pum1	100	82.458	Haplochromis_burtoni
ENSPNAG00000026728	pum1	100	80.292	ENSHGLG00000013819	Pum1	100	84.491	Heterocephalus_glaber_female
ENSPNAG00000026728	pum1	100	80.292	ENSHGLG00100008621	Pum1	100	84.491	Heterocephalus_glaber_male
ENSPNAG00000026728	pum1	50	86.286	ENSHCOG00000005149	pum1	100	79.439	Hippocampus_comes
ENSPNAG00000026728	pum1	100	96.585	ENSIPUG00000020421	pum1	100	96.549	Ictalurus_punctatus
ENSPNAG00000026728	pum1	100	80.585	ENSSTOG00000010757	PUM1	100	84.739	Ictidomys_tridecemlineatus
ENSPNAG00000026728	pum1	100	80.585	ENSJJAG00000000530	Pum1	100	84.739	Jaculus_jaculus
ENSPNAG00000026728	pum1	100	82.248	ENSKMAG00000003481	pum1	100	82.458	Kryptolebias_marmoratus
ENSPNAG00000026728	pum1	100	81.598	ENSLBEG00000002527	pum1	100	81.934	Labrus_bergylta
ENSPNAG00000026728	pum1	100	77.325	ENSLACG00000017188	PUM1	99	76.795	Latimeria_chalumnae
ENSPNAG00000026728	pum1	100	86.316	ENSLOCG00000005210	pum1	99	84.719	Lepisosteus_oculatus
ENSPNAG00000026728	pum1	100	79.458	ENSLAFG00000003178	PUM1	100	78.679	Loxodonta_africana
ENSPNAG00000026728	pum1	95	93.478	ENSMFAG00000010291	PUM1	100	93.478	Macaca_fascicularis
ENSPNAG00000026728	pum1	95	92.995	ENSMMUG00000013520	PUM1	100	92.995	Macaca_mulatta
ENSPNAG00000026728	pum1	95	92.995	ENSMNEG00000034639	PUM1	100	92.995	Macaca_nemestrina
ENSPNAG00000026728	pum1	95	92.995	ENSMLEG00000038743	PUM1	100	92.995	Mandrillus_leucophaeus
ENSPNAG00000026728	pum1	100	81.864	ENSMAMG00000011606	pum1	100	82.662	Mastacembelus_armatus
ENSPNAG00000026728	pum1	100	82.458	ENSMZEG00005005834	pum1	100	82.458	Maylandia_zebra
ENSPNAG00000026728	pum1	100	81.106	ENSMGAG00000000724	PUM1	100	81.322	Meleagris_gallopavo
ENSPNAG00000026728	pum1	100	80.146	ENSMAUG00000022090	Pum1	100	84.204	Mesocricetus_auratus
ENSPNAG00000026728	pum1	93	89.880	ENSMICG00000012213	-	100	89.880	Microcebus_murinus
ENSPNAG00000026728	pum1	95	93.237	ENSMICG00000007713	-	100	93.237	Microcebus_murinus
ENSPNAG00000026728	pum1	100	80.376	ENSMOCG00000015463	Pum1	100	84.472	Microtus_ochrogaster
ENSPNAG00000026728	pum1	100	79.771	ENSMODG00000017067	PUM1	100	78.881	Monodelphis_domestica
ENSPNAG00000026728	pum1	100	79.749	MGP_CAROLIEiJ_G0026549	Pum1	100	80.378	Mus_caroli
ENSPNAG00000026728	pum1	100	79.645	ENSMUSG00000028580	Pum1	100	83.995	Mus_musculus
ENSPNAG00000026728	pum1	100	79.645	MGP_PahariEiJ_G0028881	Pum1	100	83.995	Mus_pahari
ENSPNAG00000026728	pum1	100	79.645	MGP_SPRETEiJ_G0027529	Pum1	100	83.995	Mus_spretus
ENSPNAG00000026728	pum1	100	80.376	ENSMPUG00000015454	PUM1	100	79.013	Mustela_putorius_furo
ENSPNAG00000026728	pum1	100	80.292	ENSMLUG00000006490	PUM1	100	78.780	Myotis_lucifugus
ENSPNAG00000026728	pum1	100	80.376	ENSNGAG00000002378	Pum1	100	80.693	Nannospalax_galili
ENSPNAG00000026728	pum1	87	87.391	ENSNBRG00000010689	pum1	100	90.137	Neolamprologus_brichardi
ENSPNAG00000026728	pum1	95	89.855	ENSNLEG00000001151	PUM1	100	89.855	Nomascus_leucogenys
ENSPNAG00000026728	pum1	72	82.246	ENSMEUG00000000976	-	70	82.510	Notamacropus_eugenii
ENSPNAG00000026728	pum1	83	90.654	ENSOPRG00000001776	PUM1	75	90.654	Ochotona_princeps
ENSPNAG00000026728	pum1	100	80.585	ENSODEG00000003465	PUM1	100	84.739	Octodon_degus
ENSPNAG00000026728	pum1	100	82.726	ENSONIG00000002290	pum1	100	82.797	Oreochromis_niloticus
ENSPNAG00000026728	pum1	87	64.924	ENSOANG00000004902	-	100	66.735	Ornithorhynchus_anatinus
ENSPNAG00000026728	pum1	99	80.251	ENSOCUG00000008641	PUM1	99	78.912	Oryctolagus_cuniculus
ENSPNAG00000026728	pum1	100	82.113	ENSORLG00000011482	pum1	100	81.841	Oryzias_latipes
ENSPNAG00000026728	pum1	100	82.113	ENSORLG00020019461	pum1	100	81.672	Oryzias_latipes_hni
ENSPNAG00000026728	pum1	100	82.218	ENSORLG00015011375	pum1	100	81.757	Oryzias_latipes_hsok
ENSPNAG00000026728	pum1	100	77.315	ENSOGAG00000011063	PUM1	100	76.461	Otolemur_garnettii
ENSPNAG00000026728	pum1	95	92.995	ENSOARG00000001899	PUM1	100	92.995	Ovis_aries
ENSPNAG00000026728	pum1	95	92.995	ENSPPAG00000044003	PUM1	100	92.995	Pan_paniscus
ENSPNAG00000026728	pum1	100	80.689	ENSPPRG00000001370	PUM1	100	84.864	Panthera_pardus
ENSPNAG00000026728	pum1	100	80.480	ENSPTIG00000010798	PUM1	100	84.615	Panthera_tigris_altaica
ENSPNAG00000026728	pum1	95	92.995	ENSPTRG00000000453	PUM1	100	92.995	Pan_troglodytes
ENSPNAG00000026728	pum1	95	93.478	ENSPANG00000016338	PUM1	100	93.478	Papio_anubis
ENSPNAG00000026728	pum1	95	93.720	ENSPKIG00000010578	pum1	100	80.872	Paramormyrops_kingsleyae
ENSPNAG00000026728	pum1	100	81.106	ENSPSIG00000014118	PUM1	100	79.682	Pelodiscus_sinensis
ENSPNAG00000026728	pum1	80	85.414	ENSPMGG00000005836	pum1	100	88.628	Periophthalmus_magnuspinnatus
ENSPNAG00000026728	pum1	100	80.146	ENSPEMG00000010009	Pum1	100	84.204	Peromyscus_maniculatus_bairdii
ENSPNAG00000026728	pum1	95	93.478	ENSPCIG00000014151	PUM1	100	93.478	Phascolarctos_cinereus
ENSPNAG00000026728	pum1	95	83.304	ENSPFOG00000007289	pum1	99	89.043	Poecilia_formosa
ENSPNAG00000026728	pum1	100	83.072	ENSPLAG00000007256	pum1	100	82.668	Poecilia_latipinna
ENSPNAG00000026728	pum1	91	83.488	ENSPMEG00000019543	pum1	99	82.746	Poecilia_mexicana
ENSPNAG00000026728	pum1	100	82.075	ENSPREG00000005195	pum1	100	87.990	Poecilia_reticulata
ENSPNAG00000026728	pum1	100	78.615	ENSPPYG00000001621	PUM1	100	77.623	Pongo_abelii
ENSPNAG00000026728	pum1	84	93.519	ENSPCAG00000001979	PUM1	74	93.519	Procavia_capensis
ENSPNAG00000026728	pum1	95	93.237	ENSPCOG00000004398	PUM1	100	93.237	Propithecus_coquereli
ENSPNAG00000026728	pum1	100	77.975	ENSPVAG00000005207	PUM1	97	77.090	Pteropus_vampyrus
ENSPNAG00000026728	pum1	100	82.563	ENSPNYG00000009518	pum1	100	82.542	Pundamilia_nyererei
ENSPNAG00000026728	pum1	100	79.854	ENSRNOG00000011709	Pum1	100	78.512	Rattus_norvegicus
ENSPNAG00000026728	pum1	95	93.478	ENSRBIG00000042521	PUM1	100	93.478	Rhinopithecus_bieti
ENSPNAG00000026728	pum1	95	92.995	ENSRROG00000020156	PUM1	100	92.995	Rhinopithecus_roxellana
ENSPNAG00000026728	pum1	95	92.995	ENSSBOG00000032037	PUM1	100	92.995	Saimiri_boliviensis_boliviensis
ENSPNAG00000026728	pum1	100	79.666	ENSSHAG00000010918	PUM1	100	78.881	Sarcophilus_harrisii
ENSPNAG00000026728	pum1	100	81.949	ENSSMAG00000010918	pum1	100	82.542	Scophthalmus_maximus
ENSPNAG00000026728	pum1	100	82.773	ENSSDUG00000009021	pum1	100	82.881	Seriola_dumerili
ENSPNAG00000026728	pum1	100	82.037	ENSSLDG00000009667	pum1	100	83.508	Seriola_lalandi_dorsalis
ENSPNAG00000026728	pum1	96	81.453	ENSSARG00000003055	PUM1	91	81.564	Sorex_araneus
ENSPNAG00000026728	pum1	100	81.106	ENSSPUG00000006267	PUM1	100	79.515	Sphenodon_punctatus
ENSPNAG00000026728	pum1	100	82.773	ENSSPAG00000016636	pum1	100	82.881	Stegastes_partitus
ENSPNAG00000026728	pum1	95	93.478	ENSSSCG00000003591	PUM1	100	93.478	Sus_scrofa
ENSPNAG00000026728	pum1	100	82.563	ENSTRUG00000013121	pum1	100	88.015	Takifugu_rubripes
ENSPNAG00000026728	pum1	63	92.789	ENSTNIG00000016983	pum1	99	82.125	Tetraodon_nigroviridis
ENSPNAG00000026728	pum1	87	89.024	ENSTBEG00000013810	PUM1	89	89.024	Tupaia_belangeri
ENSPNAG00000026728	pum1	93	81.261	ENSTTRG00000007436	PUM1	89	81.370	Tursiops_truncatus
ENSPNAG00000026728	pum1	99	77.839	ENSUAMG00000018262	-	100	77.564	Ursus_americanus
ENSPNAG00000026728	pum1	95	93.478	ENSUMAG00000009211	PUM1	100	93.478	Ursus_maritimus
ENSPNAG00000026728	pum1	93	85.112	ENSVPAG00000005902	PUM1	92	85.236	Vicugna_pacos
ENSPNAG00000026728	pum1	95	93.478	ENSVVUG00000014631	PUM1	100	93.478	Vulpes_vulpes
ENSPNAG00000026728	pum1	100	76.366	ENSXETG00000012904	pum1	99	75.920	Xenopus_tropicalis
ENSPNAG00000026728	pum1	63	92.395	ENSXMAG00000002945	pum1	100	82.773	Xiphophorus_maculatus