EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000026763 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 24185 bases
Position: chrKV577070.1:8632-32816
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000036154	RRM_1	PF00076.22	1.5e-31	1	2
ENSPNAP00000036154	RRM_1	PF00076.22	1.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000030241	-	681	-	ENSPNAP00000036154	226 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000026763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000026763's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000026763	-	87	72.816	ENSPNAG00000023479	RBMS1	52	74.272
ENSPNAG00000026763	-	74	30.769	ENSPNAG00000024626	pabpc1b	59	30.769
ENSPNAG00000026763	-	77	32.692	ENSPNAG00000024355	pabpc4	59	32.692
ENSPNAG00000026763	-	65	37.097	ENSPNAG00000010909	elavl1a	67	37.097
ENSPNAG00000026763	-	71	37.097	ENSPNAG00000017169	elavl4	62	37.097
ENSPNAG00000026763	-	71	36.994	ENSPNAG00000029068	ELAVL2	60	36.994
ENSPNAG00000026763	-	87	76.000	ENSPNAG00000000408	rbms2a	52	79.570
ENSPNAG00000026763	-	62	33.750	ENSPNAG00000017276	celf3a	70	30.709
ENSPNAG00000026763	-	69	35.000	ENSPNAG00000006426	celf4	52	35.000
ENSPNAG00000026763	-	79	35.484	ENSPNAG00000003633	elavl3	71	35.484
ENSPNAG00000026763	-	85	75.385	ENSPNAG00000019569	rbms2b	50	80.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000026763	-	70	93.038	ENSG00000144642	RBMS3	71	86.702	Homo_sapiens
ENSPNAG00000026763	-	69	91.083	ENSAPOG00000007266	rbms3	50	69.565	Acanthochromis_polyacanthus
ENSPNAG00000026763	-	65	86.842	ENSACIG00000021113	RBMS3	68	82.941	Amphilophus_citrinellus
ENSPNAG00000026763	-	74	91.617	ENSACIG00000006987	-	50	91.257	Amphilophus_citrinellus
ENSPNAG00000026763	-	79	93.820	ENSAMXG00000043770	-	71	93.989	Astyanax_mexicanus
ENSPNAG00000026763	-	73	90.854	ENSAMXG00000020388	rbms3	65	87.234	Astyanax_mexicanus
ENSPNAG00000026763	-	70	93.038	ENSCAFG00020024980	RBMS3	71	83.178	Canis_lupus_dingo
ENSPNAG00000026763	-	69	91.083	ENSCSEG00000010011	RBMS3	51	83.425	Cynoglossus_semilaevis
ENSPNAG00000026763	-	77	91.908	ENSCSEG00000014677	-	71	91.803	Cynoglossus_semilaevis
ENSPNAG00000026763	-	77	91.379	ENSCVAG00000022814	-	67	84.821	Cyprinodon_variegatus
ENSPNAG00000026763	-	74	88.690	ENSDARG00000044574	rbms3	100	88.889	Danio_rerio
ENSPNAG00000026763	-	71	70.000	ENSEBUG00000005830	rbms3	59	70.000	Eptatretus_burgeri
ENSPNAG00000026763	-	77	91.379	ENSELUG00000006905	-	73	91.803	Esox_lucius
ENSPNAG00000026763	-	76	85.876	ENSGAFG00000000168	rbms3	50	85.876	Gambusia_affinis
ENSPNAG00000026763	-	69	91.083	ENSHBUG00000021196	rbms3	66	84.127	Haplochromis_burtoni
ENSPNAG00000026763	-	69	91.083	ENSMALG00000019536	RBMS3	50	83.158	Monopterus_albus
ENSPNAG00000026763	-	73	91.463	MGP_CAROLIEiJ_G0032783	Rbms3	87	87.778	Mus_caroli
ENSPNAG00000026763	-	70	93.038	ENSMUSG00000039607	Rbms3	87	88.889	Mus_musculus
ENSPNAG00000026763	-	70	93.038	MGP_PahariEiJ_G0015650	Rbms3	87	88.889	Mus_pahari
ENSPNAG00000026763	-	70	93.038	MGP_SPRETEiJ_G0033930	Rbms3	87	88.889	Mus_spretus
ENSPNAG00000026763	-	77	91.908	ENSORLG00000002306	-	50	91.908	Oryzias_latipes
ENSPNAG00000026763	-	71	90.062	ENSORLG00020022674	RBMS3	78	82.199	Oryzias_latipes_hni
ENSPNAG00000026763	-	71	90.062	ENSORLG00015005509	rbms3	78	82.199	Oryzias_latipes_hsok
ENSPNAG00000026763	-	77	91.908	ENSOMEG00000007677	-	50	91.379	Oryzias_melastigma
ENSPNAG00000026763	-	70	93.711	ENSPKIG00000016025	-	65	89.189	Paramormyrops_kingsleyae
ENSPNAG00000026763	-	74	91.617	ENSPKIG00000007989	-	71	90.761	Paramormyrops_kingsleyae
ENSPNAG00000026763	-	77	91.379	ENSPMGG00000021683	-	88	84.058	Periophthalmus_magnuspinnatus
ENSPNAG00000026763	-	70	93.038	ENSPCIG00000006106	RBMS3	79	86.387	Phascolarctos_cinereus
ENSPNAG00000026763	-	50	74.359	ENSPLAG00000002862	-	73	74.359	Poecilia_latipinna
ENSPNAG00000026763	-	74	91.617	ENSPREG00000018221	-	70	91.304	Poecilia_reticulata
ENSPNAG00000026763	-	76	85.876	ENSPREG00000011880	rbms3	50	85.876	Poecilia_reticulata
ENSPNAG00000026763	-	69	92.994	ENSSHAG00000002411	RBMS3	50	86.740	Sarcophilus_harrisii
ENSPNAG00000026763	-	69	89.809	ENSSMAG00000004997	rbms3	50	80.208	Scophthalmus_maximus
ENSPNAG00000026763	-	77	91.379	ENSSMAG00000020065	-	69	91.304	Scophthalmus_maximus
ENSPNAG00000026763	-	76	82.873	ENSSDUG00000013656	RBMS3	51	82.873	Seriola_dumerili
ENSPNAG00000026763	-	69	93.631	ENSSARG00000000695	RBMS3	51	86.631	Sorex_araneus
ENSPNAG00000026763	-	69	90.446	ENSSPAG00000020693	rbms3	50	82.967	Stegastes_partitus
ENSPNAG00000026763	-	70	93.038	ENSTBEG00000005362	RBMS3	51	86.170	Tupaia_belangeri
ENSPNAG00000026763	-	70	93.038	ENSVVUG00000004660	RBMS3	81	87.709	Vulpes_vulpes
ENSPNAG00000026763	-	76	85.876	ENSXMAG00000021783	rbms3	50	85.876	Xiphophorus_maculatus