EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000026838 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 20205 bases
Position: chrKV575311.1:4930001-4950205
Accession: 108424830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000020014	Ago_hook	PF10427.9	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000030219	-	4551	XM_017693090	ENSPNAP00000020014	1516 (aa)	XP_017548579	-

Gene Model

Click here to download ENSPNAG00000026838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000026838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000026838	tnrc6c2	100	58.452	ENSAOCG00000017648	tnrc6c2	87	57.617	Amphiprion_ocellaris
ENSPNAG00000026838	tnrc6c2	56	72.998	ENSATEG00000003656	tnrc6c2	57	72.460	Anabas_testudineus
ENSPNAG00000026838	tnrc6c2	100	57.594	ENSACLG00000006469	tnrc6c2	88	57.788	Astatotilapia_calliptera
ENSPNAG00000026838	tnrc6c2	100	85.127	ENSAMXG00000009579	tnrc6c2	100	84.605	Astyanax_mexicanus
ENSPNAG00000026838	tnrc6c2	99	70.718	ENSDARG00000103851	tnrc6c2	100	69.877	Danio_rerio
ENSPNAG00000026838	tnrc6c2	96	50.797	ENSELUG00000008149	-	94	50.703	Esox_lucius
ENSPNAG00000026838	tnrc6c2	91	55.275	ENSELUG00000007206	tnrc6c2	100	53.846	Esox_lucius
ENSPNAG00000026838	tnrc6c2	100	57.374	ENSFHEG00000003901	tnrc6c2	100	56.433	Fundulus_heteroclitus
ENSPNAG00000026838	tnrc6c2	100	54.337	ENSGACG00000019401	tnrc6c2	90	54.469	Gasterosteus_aculeatus
ENSPNAG00000026838	tnrc6c2	100	57.594	ENSHBUG00000018310	tnrc6c2	88	57.788	Haplochromis_burtoni
ENSPNAG00000026838	tnrc6c2	100	55.340	ENSHCOG00000017802	tnrc6c2	87	55.746	Hippocampus_comes
ENSPNAG00000026838	tnrc6c2	100	70.772	ENSIPUG00000022767	tnrc6c2	100	69.853	Ictalurus_punctatus
ENSPNAG00000026838	tnrc6c2	99	57.970	ENSMAMG00000001718	tnrc6c2	100	58.279	Mastacembelus_armatus
ENSPNAG00000026838	tnrc6c2	100	57.594	ENSMZEG00005023905	tnrc6c2	88	57.788	Maylandia_zebra
ENSPNAG00000026838	tnrc6c2	99	57.798	ENSMALG00000020932	tnrc6c2	100	57.134	Monopterus_albus
ENSPNAG00000026838	tnrc6c2	57	72.469	ENSNBRG00000000452	tnrc6c2	57	73.046	Neolamprologus_brichardi
ENSPNAG00000026838	tnrc6c2	91	58.890	ENSONIG00000018123	tnrc6c2	99	58.515	Oreochromis_niloticus
ENSPNAG00000026838	tnrc6c2	100	57.771	ENSORLG00000003327	tnrc6c2	87	56.870	Oryzias_latipes
ENSPNAG00000026838	tnrc6c2	100	57.014	ENSORLG00020010730	tnrc6c2	87	56.673	Oryzias_latipes_hni
ENSPNAG00000026838	tnrc6c2	100	57.711	ENSORLG00015009232	tnrc6c2	87	56.852	Oryzias_latipes_hsok
ENSPNAG00000026838	tnrc6c2	100	58.037	ENSOMEG00000017952	tnrc6c2	87	57.262	Oryzias_melastigma
ENSPNAG00000026838	tnrc6c2	99	51.134	ENSPFOG00000011590	tnrc6c2	52	60.730	Poecilia_formosa
ENSPNAG00000026838	tnrc6c2	99	56.026	ENSPLAG00000006992	tnrc6c2	100	54.846	Poecilia_latipinna
ENSPNAG00000026838	tnrc6c2	100	58.084	ENSPMEG00000012946	tnrc6c2	100	54.961	Poecilia_mexicana
ENSPNAG00000026838	tnrc6c2	99	56.239	ENSPREG00000015823	tnrc6c2	100	55.230	Poecilia_reticulata
ENSPNAG00000026838	tnrc6c2	99	57.757	ENSPNYG00000002582	tnrc6c2	100	57.635	Pundamilia_nyererei
ENSPNAG00000026838	tnrc6c2	99	57.254	ENSSMAG00000015145	tnrc6c2	100	57.531	Scophthalmus_maximus
ENSPNAG00000026838	tnrc6c2	99	58.594	ENSSDUG00000020741	tnrc6c2	100	58.531	Seriola_dumerili
ENSPNAG00000026838	tnrc6c2	99	58.654	ENSSLDG00000002077	tnrc6c2	100	58.848	Seriola_lalandi_dorsalis
ENSPNAG00000026838	tnrc6c2	100	58.551	ENSSPAG00000013052	tnrc6c2	87	57.717	Stegastes_partitus
ENSPNAG00000026838	tnrc6c2	93	66.887	ENSTNIG00000004178	tnrc6c2	90	67.257	Tetraodon_nigroviridis
ENSPNAG00000026838	tnrc6c2	99	55.774	ENSXCOG00000013252	tnrc6c2	100	54.637	Xiphophorus_couchianus
ENSPNAG00000026838	tnrc6c2	99	58.059	ENSXMAG00000006739	tnrc6c2	100	56.836	Xiphophorus_maculatus