EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000026840 (Gene tree)
Gene ID: 108439921
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 82115 bases
Position: chrKV575618.1:238787-320901
Accession: 108439921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000036238	SHQ1	PF04925.15	1.7e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000039856	-	6943	XM_017718585	ENSPNAP00000036238	605 (aa)	XP_017574074	UPI000814A2C8

Gene Model

Click here to download ENSPNAG00000026840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000026840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000026840	shq1	90	50.697	ENSG00000144736	SHQ1	96	79.167	Homo_sapiens
ENSPNAG00000026840	shq1	98	57.283	ENSAPOG00000000397	shq1	98	57.800	Acanthochromis_polyacanthus
ENSPNAG00000026840	shq1	90	50.086	ENSAMEG00000015140	SHQ1	75	59.447	Ailuropoda_melanoleuca
ENSPNAG00000026840	shq1	99	56.844	ENSACIG00000021249	shq1	98	57.921	Amphilophus_citrinellus
ENSPNAG00000026840	shq1	99	56.844	ENSAOCG00000023311	shq1	98	57.423	Amphiprion_ocellaris
ENSPNAG00000026840	shq1	99	56.585	ENSAPEG00000021686	shq1	98	57.003	Amphiprion_percula
ENSPNAG00000026840	shq1	99	56.822	ENSATEG00000008475	shq1	70	71.294	Anabas_testudineus
ENSPNAG00000026840	shq1	71	58.465	ENSAPLG00000013926	SHQ1	85	58.851	Anas_platyrhynchos
ENSPNAG00000026840	shq1	70	57.968	ENSACAG00000014809	SHQ1	64	58.945	Anolis_carolinensis
ENSPNAG00000026840	shq1	79	55.510	ENSANAG00000029241	SHQ1	75	58.756	Aotus_nancymaae
ENSPNAG00000026840	shq1	90	38.462	ENSANAG00000030500	-	72	43.128	Aotus_nancymaae
ENSPNAG00000026840	shq1	99	56.726	ENSACLG00000023077	shq1	98	54.460	Astatotilapia_calliptera
ENSPNAG00000026840	shq1	88	69.331	ENSAMXG00000043822	shq1	88	72.233	Astyanax_mexicanus
ENSPNAG00000026840	shq1	88	51.568	ENSBTAG00000005436	SHQ1	74	59.908	Bos_taurus
ENSPNAG00000026840	shq1	91	50.000	ENSCJAG00000015131	SHQ1	74	58.756	Callithrix_jacchus
ENSPNAG00000026840	shq1	93	48.829	ENSCAFG00000006434	SHQ1	74	58.986	Canis_familiaris
ENSPNAG00000026840	shq1	93	48.997	ENSCAFG00020016743	SHQ1	74	59.217	Canis_lupus_dingo
ENSPNAG00000026840	shq1	91	50.422	ENSCHIG00000012271	SHQ1	68	59.908	Capra_hircus
ENSPNAG00000026840	shq1	67	57.729	ENSTSYG00000014439	SHQ1	75	57.077	Carlito_syrichta
ENSPNAG00000026840	shq1	82	45.972	ENSCAPG00000009343	SHQ1	61	63.158	Cavia_aperea
ENSPNAG00000026840	shq1	68	57.279	ENSCPOG00000011443	SHQ1	74	58.199	Cavia_porcellus
ENSPNAG00000026840	shq1	67	48.681	ENSCCAG00000027080	SHQ1	73	49.078	Cebus_capucinus
ENSPNAG00000026840	shq1	91	39.336	ENSCCAG00000036087	-	73	44.366	Cebus_capucinus
ENSPNAG00000026840	shq1	90	49.396	ENSCATG00000041238	SHQ1	74	58.065	Cercocebus_atys
ENSPNAG00000026840	shq1	90	52.373	ENSCLAG00000004206	SHQ1	75	60.138	Chinchilla_lanigera
ENSPNAG00000026840	shq1	53	54.268	ENSCSAG00000011514	SHQ1	70	54.203	Chlorocebus_sabaeus
ENSPNAG00000026840	shq1	71	60.045	ENSCPBG00000006441	SHQ1	70	60.230	Chrysemys_picta_bellii
ENSPNAG00000026840	shq1	64	40.759	ENSCING00000008013	-	94	40.509	Ciona_intestinalis
ENSPNAG00000026840	shq1	64	39.186	ENSCSAVG00000002332	-	97	37.907	Ciona_savignyi
ENSPNAG00000026840	shq1	91	49.570	ENSCANG00000039295	SHQ1	75	57.834	Colobus_angolensis_palliatus
ENSPNAG00000026840	shq1	71	58.824	ENSCGRG00001012583	Shq1	76	58.756	Cricetulus_griseus_chok1gshd
ENSPNAG00000026840	shq1	71	58.824	ENSCGRG00000009849	Shq1	76	58.756	Cricetulus_griseus_crigri
ENSPNAG00000026840	shq1	68	71.046	ENSCSEG00000007829	shq1	69	70.892	Cynoglossus_semilaevis
ENSPNAG00000026840	shq1	71	67.667	ENSCVAG00000020049	shq1	98	55.868	Cyprinodon_variegatus
ENSPNAG00000026840	shq1	98	62.687	ENSDARG00000058522	shq1	95	63.361	Danio_rerio
ENSPNAG00000026840	shq1	91	50.087	ENSDNOG00000033937	SHQ1	75	58.986	Dasypus_novemcinctus
ENSPNAG00000026840	shq1	67	53.125	ENSETEG00000005766	SHQ1	75	52.887	Echinops_telfairi
ENSPNAG00000026840	shq1	61	46.543	ENSEBUG00000005445	shq1	76	49.258	Eptatretus_burgeri
ENSPNAG00000026840	shq1	72	58.129	ENSEASG00005002237	SHQ1	75	58.986	Equus_asinus_asinus
ENSPNAG00000026840	shq1	72	58.352	ENSECAG00000015673	SHQ1	73	59.217	Equus_caballus
ENSPNAG00000026840	shq1	73	58.537	ENSEEUG00000010568	SHQ1	75	59.677	Erinaceus_europaeus
ENSPNAG00000026840	shq1	97	61.953	ENSELUG00000003476	shq1	97	61.345	Esox_lucius
ENSPNAG00000026840	shq1	67	59.712	ENSFCAG00000012781	SHQ1	75	58.904	Felis_catus
ENSPNAG00000026840	shq1	68	61.045	ENSFALG00000013428	SHQ1	70	61.149	Ficedula_albicollis
ENSPNAG00000026840	shq1	73	56.733	ENSFDAG00000005595	SHQ1	66	57.834	Fukomys_damarensis
ENSPNAG00000026840	shq1	98	56.766	ENSFHEG00000017552	shq1	99	56.585	Fundulus_heteroclitus
ENSPNAG00000026840	shq1	64	68.718	ENSGMOG00000007350	shq1	100	67.949	Gadus_morhua
ENSPNAG00000026840	shq1	71	58.810	ENSGALG00000007798	SHQ1	70	58.295	Gallus_gallus
ENSPNAG00000026840	shq1	64	70.437	ENSGACG00000011797	shq1	100	70.437	Gasterosteus_aculeatus
ENSPNAG00000026840	shq1	90	50.174	ENSGGOG00000034818	SHQ1	74	58.295	Gorilla_gorilla
ENSPNAG00000026840	shq1	99	57.003	ENSHBUG00000010857	shq1	98	57.002	Haplochromis_burtoni
ENSPNAG00000026840	shq1	73	56.291	ENSHGLG00000003637	SHQ1	67	58.065	Heterocephalus_glaber_female
ENSPNAG00000026840	shq1	92	48.235	ENSHGLG00100011957	SHQ1	67	58.065	Heterocephalus_glaber_male
ENSPNAG00000026840	shq1	98	54.366	ENSHCOG00000010799	shq1	72	67.294	Hippocampus_comes
ENSPNAG00000026840	shq1	96	68.430	ENSIPUG00000001247	shq1	96	68.089	Ictalurus_punctatus
ENSPNAG00000026840	shq1	91	51.337	ENSSTOG00000010043	SHQ1	79	58.525	Ictidomys_tridecemlineatus
ENSPNAG00000026840	shq1	67	58.993	ENSJJAG00000017611	Shq1	76	58.525	Jaculus_jaculus
ENSPNAG00000026840	shq1	89	56.937	ENSKMAG00000004457	shq1	73	66.355	Kryptolebias_marmoratus
ENSPNAG00000026840	shq1	71	61.086	ENSLACG00000014243	SHQ1	65	61.521	Latimeria_chalumnae
ENSPNAG00000026840	shq1	99	52.201	ENSLOCG00000009970	shq1	75	64.773	Lepisosteus_oculatus
ENSPNAG00000026840	shq1	88	37.071	ENSMFAG00000037396	-	72	39.906	Macaca_fascicularis
ENSPNAG00000026840	shq1	90	49.914	ENSMFAG00000039148	SHQ1	74	58.525	Macaca_fascicularis
ENSPNAG00000026840	shq1	82	47.081	ENSMMUG00000009571	SHQ1	69	55.699	Macaca_mulatta
ENSPNAG00000026840	shq1	88	37.071	ENSMMUG00000021761	-	72	39.906	Macaca_mulatta
ENSPNAG00000026840	shq1	90	49.914	ENSMNEG00000032667	SHQ1	74	58.525	Macaca_nemestrina
ENSPNAG00000026840	shq1	90	49.396	ENSMLEG00000038493	SHQ1	74	57.834	Mandrillus_leucophaeus
ENSPNAG00000026840	shq1	99	57.440	ENSMAMG00000023432	shq1	94	55.916	Mastacembelus_armatus
ENSPNAG00000026840	shq1	99	57.003	ENSMZEG00005008649	shq1	98	57.002	Maylandia_zebra
ENSPNAG00000026840	shq1	71	58.219	ENSMGAG00000009640	SHQ1	71	58.161	Meleagris_gallopavo
ENSPNAG00000026840	shq1	73	58.278	ENSMAUG00000022030	Shq1	76	59.447	Mesocricetus_auratus
ENSPNAG00000026840	shq1	88	49.653	ENSMICG00000009224	SHQ1	74	59.447	Microcebus_murinus
ENSPNAG00000026840	shq1	71	60.959	ENSMOCG00000017836	Shq1	76	60.829	Microtus_ochrogaster
ENSPNAG00000026840	shq1	98	56.312	ENSMMOG00000010569	shq1	99	56.000	Mola_mola
ENSPNAG00000026840	shq1	87	50.730	ENSMODG00000003926	SHQ1	78	58.391	Monodelphis_domestica
ENSPNAG00000026840	shq1	99	56.109	ENSMALG00000008870	shq1	97	55.682	Monopterus_albus
ENSPNAG00000026840	shq1	79	55.852	MGP_CAROLIEiJ_G0028689	Shq1	76	59.447	Mus_caroli
ENSPNAG00000026840	shq1	79	55.647	ENSMUSG00000035378	Shq1	76	59.677	Mus_musculus
ENSPNAG00000026840	shq1	73	59.020	MGP_PahariEiJ_G0022440	Shq1	76	60.138	Mus_pahari
ENSPNAG00000026840	shq1	79	56.415	MGP_SPRETEiJ_G0029717	Shq1	76	59.447	Mus_spretus
ENSPNAG00000026840	shq1	90	51.664	ENSMPUG00000017006	SHQ1	73	59.447	Mustela_putorius_furo
ENSPNAG00000026840	shq1	63	55.499	ENSMLUG00000013539	SHQ1	73	56.812	Myotis_lucifugus
ENSPNAG00000026840	shq1	79	50.728	ENSNGAG00000023317	Shq1	75	53.066	Nannospalax_galili
ENSPNAG00000026840	shq1	83	53.448	ENSNBRG00000024004	shq1	97	53.462	Neolamprologus_brichardi
ENSPNAG00000026840	shq1	90	50.609	ENSNLEG00000002731	SHQ1	74	58.756	Nomascus_leucogenys
ENSPNAG00000026840	shq1	67	60.185	ENSMEUG00000009350	-	70	60.185	Notamacropus_eugenii
ENSPNAG00000026840	shq1	90	49.910	ENSODEG00000009192	SHQ1	79	58.199	Octodon_degus
ENSPNAG00000026840	shq1	99	57.374	ENSONIG00000020264	shq1	98	57.541	Oreochromis_niloticus
ENSPNAG00000026840	shq1	67	58.753	ENSOCUG00000016695	SHQ1	74	59.217	Oryctolagus_cuniculus
ENSPNAG00000026840	shq1	70	68.618	ENSORLG00000023538	shq1	77	67.916	Oryzias_latipes
ENSPNAG00000026840	shq1	70	69.087	ENSORLG00020003697	shq1	77	68.384	Oryzias_latipes_hni
ENSPNAG00000026840	shq1	87	59.150	ENSORLG00015021040	shq1	77	67.916	Oryzias_latipes_hsok
ENSPNAG00000026840	shq1	70	68.852	ENSOMEG00000001225	shq1	77	68.310	Oryzias_melastigma
ENSPNAG00000026840	shq1	90	49.826	ENSOGAG00000003898	SHQ1	76	57.208	Otolemur_garnettii
ENSPNAG00000026840	shq1	88	50.346	ENSOARG00000009547	SHQ1	75	59.453	Ovis_aries
ENSPNAG00000026840	shq1	88	38.838	ENSPPAG00000043263	-	72	41.725	Pan_paniscus
ENSPNAG00000026840	shq1	90	50.697	ENSPPAG00000027714	SHQ1	74	58.756	Pan_paniscus
ENSPNAG00000026840	shq1	90	50.347	ENSPPRG00000004769	SHQ1	75	58.904	Panthera_pardus
ENSPNAG00000026840	shq1	93	47.395	ENSPTIG00000011478	SHQ1	74	56.582	Panthera_tigris_altaica
ENSPNAG00000026840	shq1	88	38.475	ENSPTRG00000048303	-	72	41.725	Pan_troglodytes
ENSPNAG00000026840	shq1	90	50.871	ENSPTRG00000015106	SHQ1	74	58.756	Pan_troglodytes
ENSPNAG00000026840	shq1	67	58.034	ENSPANG00000002881	SHQ1	74	58.756	Papio_anubis
ENSPNAG00000026840	shq1	98	58.249	ENSPKIG00000021517	shq1	74	70.449	Paramormyrops_kingsleyae
ENSPNAG00000026840	shq1	71	60.045	ENSPSIG00000005536	SHQ1	71	60.230	Pelodiscus_sinensis
ENSPNAG00000026840	shq1	98	53.542	ENSPMGG00000008838	shq1	72	65.882	Periophthalmus_magnuspinnatus
ENSPNAG00000026840	shq1	64	61.000	ENSPEMG00000000251	Shq1	76	59.908	Peromyscus_maniculatus_bairdii
ENSPNAG00000026840	shq1	71	58.676	ENSPMAG00000005372	shq1	95	59.811	Petromyzon_marinus
ENSPNAG00000026840	shq1	71	66.282	ENSPFOG00000003118	shq1	79	66.589	Poecilia_formosa
ENSPNAG00000026840	shq1	56	63.450	ENSPMEG00000011076	shq1	75	63.501	Poecilia_mexicana
ENSPNAG00000026840	shq1	81	56.823	ENSPREG00000000591	shq1	92	54.762	Poecilia_reticulata
ENSPNAG00000026840	shq1	67	59.472	ENSPPYG00000013717	SHQ1	74	59.217	Pongo_abelii
ENSPNAG00000026840	shq1	68	59.524	ENSPCAG00000009035	SHQ1	75	59.447	Procavia_capensis
ENSPNAG00000026840	shq1	67	58.612	ENSPCOG00000008415	SHQ1	74	59.770	Propithecus_coquereli
ENSPNAG00000026840	shq1	90	50.617	ENSPVAG00000017392	SHQ1	75	58.065	Pteropus_vampyrus
ENSPNAG00000026840	shq1	99	57.536	ENSPNYG00000003878	shq1	98	57.869	Pundamilia_nyererei
ENSPNAG00000026840	shq1	73	58.407	ENSRNOG00000005433	Shq1	72	59.508	Rattus_norvegicus
ENSPNAG00000026840	shq1	91	48.776	ENSRBIG00000026280	SHQ1	74	56.706	Rhinopithecus_bieti
ENSPNAG00000026840	shq1	91	49.914	ENSRROG00000034126	SHQ1	75	58.065	Rhinopithecus_roxellana
ENSPNAG00000026840	shq1	67	50.839	ENSSBOG00000021038	SHQ1	73	51.613	Saimiri_boliviensis_boliviensis
ENSPNAG00000026840	shq1	87	51.537	ENSSHAG00000015077	SHQ1	77	58.945	Sarcophilus_harrisii
ENSPNAG00000026840	shq1	99	57.238	ENSSFOG00015016241	shq1	77	70.047	Scleropages_formosus
ENSPNAG00000026840	shq1	99	57.051	ENSSMAG00000016151	shq1	98	57.818	Scophthalmus_maximus
ENSPNAG00000026840	shq1	99	57.234	ENSSDUG00000011986	shq1	98	58.456	Seriola_dumerili
ENSPNAG00000026840	shq1	99	56.230	ENSSLDG00000013908	shq1	98	57.591	Seriola_lalandi_dorsalis
ENSPNAG00000026840	shq1	91	43.608	ENSSARG00000007119	SHQ1	76	49.769	Sorex_araneus
ENSPNAG00000026840	shq1	77	45.783	ENSSPUG00000011526	-	64	55.491	Sphenodon_punctatus
ENSPNAG00000026840	shq1	88	52.931	ENSSSCG00000011518	SHQ1	74	60.138	Sus_scrofa
ENSPNAG00000026840	shq1	68	60.427	ENSTGUG00000009933	SHQ1	75	60.183	Taeniopygia_guttata
ENSPNAG00000026840	shq1	98	54.139	ENSTRUG00000009446	shq1	98	53.344	Takifugu_rubripes
ENSPNAG00000026840	shq1	67	63.990	ENSTNIG00000007354	shq1	94	63.636	Tetraodon_nigroviridis
ENSPNAG00000026840	shq1	61	78.723	ENSTBEG00000011295	SHQ1	55	78.723	Tupaia_belangeri
ENSPNAG00000026840	shq1	91	49.147	ENSTTRG00000005320	SHQ1	75	58.525	Tursiops_truncatus
ENSPNAG00000026840	shq1	73	59.193	ENSUMAG00000024031	SHQ1	74	61.085	Ursus_maritimus
ENSPNAG00000026840	shq1	66	46.882	ENSVPAG00000004880	SHQ1	72	48.964	Vicugna_pacos
ENSPNAG00000026840	shq1	93	50.515	ENSVVUG00000013906	SHQ1	74	59.217	Vulpes_vulpes
ENSPNAG00000026840	shq1	72	57.336	ENSXETG00000032215	shq1	70	57.576	Xenopus_tropicalis