EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000026891 (Gene tree)
Gene ID: 108444574
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 8158 bases
Position: chrKV575948.1:102804-110961
Accession: 108444574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000020110	Nucleoplasmin	PF03066.15	6.4e-35	1	1
ENSPNAP00000036221	Nucleoplasmin	PF03066.15	1.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000030455	-	2231	-	ENSPNAP00000036221	297 (aa)	-	-
ENSPNAT00000030462	-	1854	XM_017725789	ENSPNAP00000020110	292 (aa)	XP_017581278	UPI0008142A05

Gene Model

Click here to download ENSPNAG00000026891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000026891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000026891	npm1a	97	39.527	ENSPNAG00000005498	npm1b	96	41.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000026891	npm1a	99	61.716	ENSAPOG00000002813	npm1a	98	60.396	Acanthochromis_polyacanthus
ENSPNAG00000026891	npm1a	95	61.972	ENSACIG00000014201	npm1a	100	61.268	Amphilophus_citrinellus
ENSPNAG00000026891	npm1a	90	59.924	ENSAOCG00000004978	npm1a	100	59.848	Amphiprion_ocellaris
ENSPNAG00000026891	npm1a	99	62.000	ENSAPEG00000008594	npm1a	98	60.000	Amphiprion_percula
ENSPNAG00000026891	npm1a	99	60.194	ENSATEG00000008885	npm1a	98	59.223	Anabas_testudineus
ENSPNAG00000026891	npm1a	96	56.184	ENSACLG00000008376	npm1a	94	56.140	Astatotilapia_calliptera
ENSPNAG00000026891	npm1a	100	70.548	ENSAMXG00000010155	npm1a	100	72.603	Astyanax_mexicanus
ENSPNAG00000026891	npm1a	99	53.448	ENSCSEG00000011165	npm1a	98	53.793	Cynoglossus_semilaevis
ENSPNAG00000026891	npm1a	98	62.963	ENSCVAG00000008960	npm1a	98	61.074	Cyprinodon_variegatus
ENSPNAG00000026891	npm1a	99	69.759	ENSDARG00000014329	npm1a	100	83.333	Danio_rerio
ENSPNAG00000026891	npm1a	95	38.978	ENSEBUG00000012753	npm1a	86	39.597	Eptatretus_burgeri
ENSPNAG00000026891	npm1a	99	63.140	ENSELUG00000013705	npm1a	98	64.164	Esox_lucius
ENSPNAG00000026891	npm1a	98	62.791	ENSFHEG00000012496	npm1a	98	62.252	Fundulus_heteroclitus
ENSPNAG00000026891	npm1a	99	54.098	ENSGAFG00000013059	npm1a	99	52.288	Gambusia_affinis
ENSPNAG00000026891	npm1a	98	62.759	ENSGACG00000020319	npm1a	97	60.900	Gasterosteus_aculeatus
ENSPNAG00000026891	npm1a	98	58.991	ENSHBUG00000000776	npm1a	98	58.991	Haplochromis_burtoni
ENSPNAG00000026891	npm1a	99	51.827	ENSHCOG00000001059	npm1a	96	51.515	Hippocampus_comes
ENSPNAG00000026891	npm1a	99	76.792	ENSIPUG00000019452	npm1	99	75.085	Ictalurus_punctatus
ENSPNAG00000026891	npm1a	98	58.844	ENSKMAG00000010709	npm1a	97	58.844	Kryptolebias_marmoratus
ENSPNAG00000026891	npm1a	99	60.201	ENSLBEG00000008793	npm1a	98	59.532	Labrus_bergylta
ENSPNAG00000026891	npm1a	86	56.934	ENSLOCG00000009683	npm1a	99	55.109	Lepisosteus_oculatus
ENSPNAG00000026891	npm1a	99	62.838	ENSMAMG00000009344	npm1a	81	61.486	Mastacembelus_armatus
ENSPNAG00000026891	npm1a	98	58.730	ENSMZEG00005013717	npm1a	98	60.000	Maylandia_zebra
ENSPNAG00000026891	npm1a	95	63.121	ENSMMOG00000007980	npm1a	99	60.993	Mola_mola
ENSPNAG00000026891	npm1a	97	59.797	ENSMALG00000001146	npm1a	96	59.797	Monopterus_albus
ENSPNAG00000026891	npm1a	98	57.827	ENSNBRG00000013172	npm1a	98	57.605	Neolamprologus_brichardi
ENSPNAG00000026891	npm1a	98	56.291	ENSONIG00000001860	npm1a	97	61.386	Oreochromis_niloticus
ENSPNAG00000026891	npm1a	99	58.644	ENSORLG00000010179	npm1a	99	57.770	Oryzias_latipes
ENSPNAG00000026891	npm1a	99	58.844	ENSORLG00020020817	npm1a	99	57.627	Oryzias_latipes_hni
ENSPNAG00000026891	npm1a	99	58.983	ENSORLG00015003439	npm1a	99	58.108	Oryzias_latipes_hsok
ENSPNAG00000026891	npm1a	99	58.784	ENSOMEG00000007083	npm1a	98	57.432	Oryzias_melastigma
ENSPNAG00000026891	npm1a	99	54.248	ENSPKIG00000023943	npm1a	99	54.455	Paramormyrops_kingsleyae
ENSPNAG00000026891	npm1a	98	51.916	ENSPMGG00000011716	npm1a	98	53.793	Periophthalmus_magnuspinnatus
ENSPNAG00000026891	npm1a	99	58.940	ENSPFOG00000019173	npm1a	99	57.426	Poecilia_formosa
ENSPNAG00000026891	npm1a	99	57.756	ENSPLAG00000001093	npm1a	99	56.436	Poecilia_latipinna
ENSPNAG00000026891	npm1a	99	58.940	ENSPMEG00000012523	npm1a	99	57.426	Poecilia_mexicana
ENSPNAG00000026891	npm1a	99	57.947	ENSPREG00000001647	npm1a	99	57.426	Poecilia_reticulata
ENSPNAG00000026891	npm1a	98	59.615	ENSPNYG00000019321	npm1a	98	59.615	Pundamilia_nyererei
ENSPNAG00000026891	npm1a	99	61.486	ENSSFOG00015007074	npm1a	98	60.339	Scleropages_formosus
ENSPNAG00000026891	npm1a	99	66.327	ENSSMAG00000019090	npm1a	98	65.306	Scophthalmus_maximus
ENSPNAG00000026891	npm1a	99	61.000	ENSSDUG00000015609	npm1a	98	60.667	Seriola_dumerili
ENSPNAG00000026891	npm1a	99	60.535	ENSSLDG00000017849	npm1a	98	60.201	Seriola_lalandi_dorsalis
ENSPNAG00000026891	npm1a	99	55.862	ENSSPAG00000021660	npm1a	98	55.172	Stegastes_partitus
ENSPNAG00000026891	npm1a	99	62.745	ENSTRUG00000024003	npm1a	98	61.311	Takifugu_rubripes
ENSPNAG00000026891	npm1a	99	60.339	ENSTNIG00000010773	npm1a	98	60.000	Tetraodon_nigroviridis
ENSPNAG00000026891	npm1a	99	51.351	ENSXCOG00000005958	npm1a	100	52.595	Xiphophorus_couchianus
ENSPNAG00000026891	npm1a	99	54.575	ENSXMAG00000000396	npm1a	99	53.746	Xiphophorus_maculatus