EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPNAG00000027070 (Gene tree)
Gene ID
108432151
Gene Symbol
si:ch211-263k4.2
Alias
-
Full Name
PR/SET domain 16
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Plus strand
Length
235018 bases
Position
chrKV575399.1:2004375-2239392
Accession
108432151
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000036332zf-C2H2PF00096.264.9e-4918
ENSPNAP00000036332zf-C2H2PF00096.264.9e-4928
ENSPNAP00000036332zf-C2H2PF00096.264.9e-4938
ENSPNAP00000036332zf-C2H2PF00096.264.9e-4948
ENSPNAP00000036332zf-C2H2PF00096.264.9e-4958
ENSPNAP00000036332zf-C2H2PF00096.264.9e-4968
ENSPNAP00000036332zf-C2H2PF00096.264.9e-4978
ENSPNAP00000036332zf-C2H2PF00096.264.9e-4988
ENSPNAP00000036340zf-C2H2PF00096.265.3e-4918
ENSPNAP00000036340zf-C2H2PF00096.265.3e-4928
ENSPNAP00000036340zf-C2H2PF00096.265.3e-4938
ENSPNAP00000036340zf-C2H2PF00096.265.3e-4948
ENSPNAP00000036340zf-C2H2PF00096.265.3e-4958
ENSPNAP00000036340zf-C2H2PF00096.265.3e-4968
ENSPNAP00000036340zf-C2H2PF00096.265.3e-4978
ENSPNAP00000036340zf-C2H2PF00096.265.3e-4988
ENSPNAP00000036311zf-C2H2PF00096.267.2e-4016
ENSPNAP00000036311zf-C2H2PF00096.267.2e-4026
ENSPNAP00000036311zf-C2H2PF00096.267.2e-4036
ENSPNAP00000036311zf-C2H2PF00096.267.2e-4046
ENSPNAP00000036311zf-C2H2PF00096.267.2e-4056
ENSPNAP00000036311zf-C2H2PF00096.267.2e-4066
ENSPNAP00000036332zf-metPF12874.70.0001711
ENSPNAP00000036340zf-metPF12874.70.0001811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000030669-3441-ENSPNAP000000363111146 (aa)--
ENSPNAT00000030705-7472XM_017705809ENSPNAP000000363321196 (aa)XP_017561298-
ENSPNAT00000030742-7335XM_017705804ENSPNAP000000363401204 (aa)XP_017561293UPI0008143E7D
Gene Model
Click here to download ENSPNAG00000027070's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000027070's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000027070si:ch211-263k4.210096.678ENSAMXG00000014024si:ch211-263k4.210096.678Astyanax_mexicanus
ENSPNAG00000027070si:ch211-263k4.27889.914ENSDARG00000078324si:ch211-263k4.210089.914Danio_rerio
ENSPNAG00000027070si:ch211-263k4.210091.973ENSIPUG00000020607prdm169986.739Ictalurus_punctatus
ENSPNAG00000027070si:ch211-263k4.29979.676ENSLOCG00000005336si:ch211-263k4.29180.431Lepisosteus_oculatus
ENSPNAG00000027070si:ch211-263k4.29980.892ENSPKIG00000013811si:ch211-263k4.29980.792Paramormyrops_kingsleyae
ENSPNAG00000027070si:ch211-263k4.29975.105ENSSFOG00015010518si:ch211-263k4.210073.906Scleropages_formosus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us