EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000027258 (Gene tree)
Gene ID: 108427694
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 11165 bases
Position: chrKV575340.1:2247887-2259051
Accession: 108427694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000020425	zf-C2H2	PF00096.26	8.4e-30	1	6
ENSPNAP00000020425	zf-C2H2	PF00096.26	8.4e-30	2	6
ENSPNAP00000020425	zf-C2H2	PF00096.26	8.4e-30	3	6
ENSPNAP00000020425	zf-C2H2	PF00096.26	8.4e-30	4	6
ENSPNAP00000020425	zf-C2H2	PF00096.26	8.4e-30	5	6
ENSPNAP00000020425	zf-C2H2	PF00096.26	8.4e-30	6	6
ENSPNAP00000020425	zf-met	PF12874.7	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000030987	-	3173	XM_017698062	ENSPNAP00000020425	377 (aa)	XP_017553551	UPI0008144170

Gene Model

Click here to download ENSPNAG00000027258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000027258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000027258	gfi1ab	55	44.099	ENSPNAG00000005857	-	96	44.099
ENSPNAG00000027258	gfi1ab	56	43.976	ENSPNAG00000018437	-	80	43.976
ENSPNAG00000027258	gfi1ab	50	44.099	ENSPNAG00000005829	-	79	43.452
ENSPNAG00000027258	gfi1ab	50	34.862	ENSPNAG00000025211	-	65	33.835
ENSPNAG00000027258	gfi1ab	50	45.181	ENSPNAG00000029386	-	86	45.181
ENSPNAG00000027258	gfi1ab	50	42.771	ENSPNAG00000017479	-	85	42.771
ENSPNAG00000027258	gfi1ab	53	40.367	ENSPNAG00000000750	znf646	53	40.367
ENSPNAG00000027258	gfi1ab	50	42.336	ENSPNAG00000009741	-	57	42.336
ENSPNAG00000027258	gfi1ab	54	43.452	ENSPNAG00000016478	-	99	43.452
ENSPNAG00000027258	gfi1ab	51	31.282	ENSPNAG00000024689	wu:fe05a04	55	31.282
ENSPNAG00000027258	gfi1ab	58	41.104	ENSPNAG00000000783	-	94	41.104
ENSPNAG00000027258	gfi1ab	56	41.667	ENSPNAG00000028765	-	89	41.667
ENSPNAG00000027258	gfi1ab	50	44.643	ENSPNAG00000007265	-	89	44.643
ENSPNAG00000027258	gfi1ab	56	35.185	ENSPNAG00000010317	-	85	41.667
ENSPNAG00000027258	gfi1ab	100	40.160	ENSPNAG00000014299	-	96	40.160
ENSPNAG00000027258	gfi1ab	60	40.278	ENSPNAG00000018409	-	98	40.278
ENSPNAG00000027258	gfi1ab	55	40.000	ENSPNAG00000025570	-	81	40.000
ENSPNAG00000027258	gfi1ab	52	43.293	ENSPNAG00000012206	-	99	43.293
ENSPNAG00000027258	gfi1ab	61	44.444	ENSPNAG00000019996	wt1b	55	44.444
ENSPNAG00000027258	gfi1ab	100	59.033	ENSPNAG00000028014	GFI1	100	59.033
ENSPNAG00000027258	gfi1ab	65	44.086	ENSPNAG00000017138	znf236	91	46.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000027258	gfi1ab	100	60.706	ENSG00000162676	GFI1	100	61.412	Homo_sapiens
ENSPNAG00000027258	gfi1ab	100	67.337	ENSAPOG00000015189	gfi1ab	100	67.588	Acanthochromis_polyacanthus
ENSPNAG00000027258	gfi1ab	50	88.947	ENSAMEG00000013858	-	99	88.947	Ailuropoda_melanoleuca
ENSPNAG00000027258	gfi1ab	100	66.582	ENSACIG00000016354	gfi1ab	100	66.582	Amphilophus_citrinellus
ENSPNAG00000027258	gfi1ab	100	44.762	ENSAOCG00000008339	gfi1ab	100	46.287	Amphiprion_ocellaris
ENSPNAG00000027258	gfi1ab	100	67.085	ENSAPEG00000023870	gfi1ab	100	67.337	Amphiprion_percula
ENSPNAG00000027258	gfi1ab	100	64.948	ENSATEG00000009167	gfi1ab	89	64.948	Anabas_testudineus
ENSPNAG00000027258	gfi1ab	84	65.000	ENSAPLG00000015700	GFI1	97	65.000	Anas_platyrhynchos
ENSPNAG00000027258	gfi1ab	100	62.410	ENSACAG00000004498	GFI1	100	63.659	Anolis_carolinensis
ENSPNAG00000027258	gfi1ab	100	60.941	ENSANAG00000019656	GFI1	100	61.647	Aotus_nancymaae
ENSPNAG00000027258	gfi1ab	100	65.672	ENSACLG00000026458	gfi1ab	93	65.672	Astatotilapia_calliptera
ENSPNAG00000027258	gfi1ab	100	54.762	ENSAMXG00000006669	GFI1	100	54.762	Astyanax_mexicanus
ENSPNAG00000027258	gfi1ab	100	87.895	ENSAMXG00000039600	gfi1ab	100	87.895	Astyanax_mexicanus
ENSPNAG00000027258	gfi1ab	100	41.053	ENSAMXG00000015228	-	95	41.053	Astyanax_mexicanus
ENSPNAG00000027258	gfi1ab	100	60.520	ENSBTAG00000016723	GFI1	100	61.229	Bos_taurus
ENSPNAG00000027258	gfi1ab	100	60.422	ENSCJAG00000017609	GFI1	100	61.412	Callithrix_jacchus
ENSPNAG00000027258	gfi1ab	100	60.656	ENSCAFG00000020155	GFI1	100	62.588	Canis_familiaris
ENSPNAG00000027258	gfi1ab	100	60.656	ENSCAFG00020013371	GFI1	88	62.588	Canis_lupus_dingo
ENSPNAG00000027258	gfi1ab	100	60.284	ENSCHIG00000016135	GFI1	100	60.993	Capra_hircus
ENSPNAG00000027258	gfi1ab	100	60.284	ENSCPOG00000011727	GFI1	100	61.466	Cavia_porcellus
ENSPNAG00000027258	gfi1ab	100	60.000	ENSCCAG00000036072	GFI1	100	60.941	Cebus_capucinus
ENSPNAG00000027258	gfi1ab	100	60.471	ENSCATG00000037873	GFI1	100	61.176	Cercocebus_atys
ENSPNAG00000027258	gfi1ab	100	64.975	ENSCLAG00000005915	GFI1	100	59.862	Chinchilla_lanigera
ENSPNAG00000027258	gfi1ab	99	54.865	ENSCSAG00000001469	GFI1	100	55.676	Chlorocebus_sabaeus
ENSPNAG00000027258	gfi1ab	100	59.767	ENSCANG00000034077	GFI1	100	60.465	Colobus_angolensis_palliatus
ENSPNAG00000027258	gfi1ab	100	57.737	ENSCGRG00001015432	Gfi1	100	58.986	Cricetulus_griseus_chok1gshd
ENSPNAG00000027258	gfi1ab	100	61.194	ENSCSEG00000017729	GFI1	100	62.250	Cynoglossus_semilaevis
ENSPNAG00000027258	gfi1ab	100	55.769	ENSCVAG00000004930	GFI1	100	57.488	Cyprinodon_variegatus
ENSPNAG00000027258	gfi1ab	100	65.570	ENSCVAG00000011828	gfi1ab	100	65.570	Cyprinodon_variegatus
ENSPNAG00000027258	gfi1ab	100	74.121	ENSDARG00000044457	gfi1ab	100	74.121	Danio_rerio
ENSPNAG00000027258	gfi1ab	100	59.397	ENSDNOG00000000782	GFI1	97	60.325	Dasypus_novemcinctus
ENSPNAG00000027258	gfi1ab	100	60.664	ENSEASG00005015509	GFI1	86	61.137	Equus_asinus_asinus
ENSPNAG00000027258	gfi1ab	99	53.351	ENSECAG00000006647	GFI1	92	54.124	Equus_caballus
ENSPNAG00000027258	gfi1ab	100	60.526	ENSEEUG00000000198	GFI1	100	61.244	Erinaceus_europaeus
ENSPNAG00000027258	gfi1ab	100	69.231	ENSELUG00000003015	gfi1ab	99	69.231	Esox_lucius
ENSPNAG00000027258	gfi1ab	100	62.250	ENSELUG00000019033	GFI1	100	62.500	Esox_lucius
ENSPNAG00000027258	gfi1ab	100	60.890	ENSFCAG00000005914	GFI1	100	62.588	Felis_catus
ENSPNAG00000027258	gfi1ab	100	66.247	ENSFHEG00000010997	gfi1ab	100	66.247	Fundulus_heteroclitus
ENSPNAG00000027258	gfi1ab	100	58.968	ENSFHEG00000000341	GFI1	100	60.147	Fundulus_heteroclitus
ENSPNAG00000027258	gfi1ab	100	66.240	ENSGMOG00000007737	gfi1ab	100	66.240	Gadus_morhua
ENSPNAG00000027258	gfi1ab	100	64.865	ENSGALG00000043650	GFI1	100	65.356	Gallus_gallus
ENSPNAG00000027258	gfi1ab	100	65.337	ENSGAFG00000016637	gfi1ab	100	65.337	Gambusia_affinis
ENSPNAG00000027258	gfi1ab	100	57.248	ENSGAFG00000018063	GFI1	100	59.902	Gambusia_affinis
ENSPNAG00000027258	gfi1ab	100	66.667	ENSGACG00000004257	gfi1ab	97	66.921	Gasterosteus_aculeatus
ENSPNAG00000027258	gfi1ab	100	60.706	ENSGGOG00000005320	GFI1	100	61.412	Gorilla_gorilla
ENSPNAG00000027258	gfi1ab	100	65.816	ENSHBUG00000011969	gfi1ab	100	65.816	Haplochromis_burtoni
ENSPNAG00000027258	gfi1ab	100	61.702	ENSHGLG00000008020	GFI1	100	62.175	Heterocephalus_glaber_female
ENSPNAG00000027258	gfi1ab	100	61.702	ENSHGLG00100000610	GFI1	100	62.175	Heterocephalus_glaber_male
ENSPNAG00000027258	gfi1ab	100	58.293	ENSHCOG00000008590	gfi1ab	100	58.293	Hippocampus_comes
ENSPNAG00000027258	gfi1ab	100	60.358	ENSHCOG00000019555	GFI1	100	60.870	Hippocampus_comes
ENSPNAG00000027258	gfi1ab	100	74.430	ENSIPUG00000010071	gfi1ab	87	74.684	Ictalurus_punctatus
ENSPNAG00000027258	gfi1ab	100	59.799	ENSIPUG00000013414	GFI1	100	59.799	Ictalurus_punctatus
ENSPNAG00000027258	gfi1ab	100	59.080	ENSSTOG00000014583	GFI1	100	62.150	Ictidomys_tridecemlineatus
ENSPNAG00000027258	gfi1ab	100	66.497	ENSKMAG00000003810	gfi1ab	100	66.497	Kryptolebias_marmoratus
ENSPNAG00000027258	gfi1ab	100	64.885	ENSLBEG00000027776	gfi1ab	100	65.140	Labrus_bergylta
ENSPNAG00000027258	gfi1ab	100	65.664	ENSLACG00000013362	GFI1	98	65.664	Latimeria_chalumnae
ENSPNAG00000027258	gfi1ab	99	46.438	ENSLACG00000017590	-	99	46.842	Latimeria_chalumnae
ENSPNAG00000027258	gfi1ab	100	67.920	ENSLOCG00000004711	gfi1ab	100	68.170	Lepisosteus_oculatus
ENSPNAG00000027258	gfi1ab	100	60.476	ENSLAFG00000018346	GFI1	100	62.530	Loxodonta_africana
ENSPNAG00000027258	gfi1ab	100	60.471	ENSMFAG00000045801	GFI1	100	61.176	Macaca_fascicularis
ENSPNAG00000027258	gfi1ab	100	60.471	ENSMNEG00000036338	GFI1	100	61.176	Macaca_nemestrina
ENSPNAG00000027258	gfi1ab	100	60.471	ENSMLEG00000036181	GFI1	100	61.176	Mandrillus_leucophaeus
ENSPNAG00000027258	gfi1ab	100	66.250	ENSMAMG00000008125	gfi1ab	100	66.250	Mastacembelus_armatus
ENSPNAG00000027258	gfi1ab	100	65.672	ENSMZEG00005009895	gfi1ab	100	65.672	Maylandia_zebra
ENSPNAG00000027258	gfi1ab	85	66.379	ENSMGAG00000008187	GFI1	99	66.954	Meleagris_gallopavo
ENSPNAG00000027258	gfi1ab	100	59.765	ENSMICG00000047208	GFI1	100	60.235	Microcebus_murinus
ENSPNAG00000027258	gfi1ab	100	65.455	ENSMMOG00000005556	gfi1ab	100	65.455	Mola_mola
ENSPNAG00000027258	gfi1ab	100	61.253	ENSMODG00000011802	GFI1	100	62.207	Monodelphis_domestica
ENSPNAG00000027258	gfi1ab	100	64.031	ENSMALG00000014672	gfi1ab	100	64.031	Monopterus_albus
ENSPNAG00000027258	gfi1ab	100	60.094	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSPNAG00000027258	gfi1ab	100	59.390	ENSMUSG00000029275	Gfi1	100	59.259	Mus_musculus
ENSPNAG00000027258	gfi1ab	100	60.047	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSPNAG00000027258	gfi1ab	100	59.624	MGP_SPRETEiJ_G0028507	Gfi1	100	58.352	Mus_spretus
ENSPNAG00000027258	gfi1ab	100	65.803	ENSMPUG00000004178	GFI1	97	66.580	Mustela_putorius_furo
ENSPNAG00000027258	gfi1ab	100	59.716	ENSMLUG00000015191	GFI1	97	60.664	Myotis_lucifugus
ENSPNAG00000027258	gfi1ab	100	64.128	ENSNBRG00000015774	gfi1ab	100	64.128	Neolamprologus_brichardi
ENSPNAG00000027258	gfi1ab	87	61.333	ENSNLEG00000010470	GFI1	87	65.057	Nomascus_leucogenys
ENSPNAG00000027258	gfi1ab	100	60.235	ENSOPRG00000001473	GFI1	100	61.176	Ochotona_princeps
ENSPNAG00000027258	gfi1ab	100	65.423	ENSONIG00000019246	gfi1ab	100	65.423	Oreochromis_niloticus
ENSPNAG00000027258	gfi1ab	98	54.301	ENSOCUG00000023553	GFI1	93	54.839	Oryctolagus_cuniculus
ENSPNAG00000027258	gfi1ab	100	60.000	ENSORLG00000005060	GFI1	100	60.302	Oryzias_latipes
ENSPNAG00000027258	gfi1ab	100	63.027	ENSORLG00000013806	gfi1ab	100	63.027	Oryzias_latipes
ENSPNAG00000027258	gfi1ab	100	57.029	ENSORLG00020002817	GFI1	100	57.029	Oryzias_latipes_hni
ENSPNAG00000027258	gfi1ab	100	62.657	ENSORLG00020001602	gfi1ab	100	62.657	Oryzias_latipes_hni
ENSPNAG00000027258	gfi1ab	100	57.576	ENSORLG00015006070	GFI1	100	59.698	Oryzias_latipes_hsok
ENSPNAG00000027258	gfi1ab	100	57.037	ENSOMEG00000016722	GFI1	100	59.148	Oryzias_melastigma
ENSPNAG00000027258	gfi1ab	100	63.824	ENSOGAG00000027913	GFI1	100	64.341	Otolemur_garnettii
ENSPNAG00000027258	gfi1ab	100	63.731	ENSPPAG00000042186	GFI1	100	64.249	Pan_paniscus
ENSPNAG00000027258	gfi1ab	100	60.890	ENSPPRG00000007521	GFI1	100	62.588	Panthera_pardus
ENSPNAG00000027258	gfi1ab	100	60.706	ENSPTRG00000043053	GFI1	100	61.412	Pan_troglodytes
ENSPNAG00000027258	gfi1ab	100	60.471	ENSPANG00000016433	GFI1	100	61.176	Papio_anubis
ENSPNAG00000027258	gfi1ab	100	69.077	ENSPKIG00000004263	GFI1	100	69.077	Paramormyrops_kingsleyae
ENSPNAG00000027258	gfi1ab	87	65.527	ENSPSIG00000008734	GFI1	97	66.097	Pelodiscus_sinensis
ENSPNAG00000027258	gfi1ab	99	53.476	ENSPMGG00000011041	GFI1	99	53.476	Periophthalmus_magnuspinnatus
ENSPNAG00000027258	gfi1ab	100	63.010	ENSPMGG00000012546	gfi1ab	100	63.520	Periophthalmus_magnuspinnatus
ENSPNAG00000027258	gfi1ab	100	62.411	ENSPCIG00000013728	GFI1	100	63.121	Phascolarctos_cinereus
ENSPNAG00000027258	gfi1ab	100	65.835	ENSPFOG00000023214	gfi1ab	100	65.835	Poecilia_formosa
ENSPNAG00000027258	gfi1ab	100	65.835	ENSPLAG00000010879	gfi1ab	100	65.835	Poecilia_latipinna
ENSPNAG00000027258	gfi1ab	100	58.738	ENSPLAG00000005376	GFI1	91	60.244	Poecilia_latipinna
ENSPNAG00000027258	gfi1ab	100	65.835	ENSPMEG00000013694	gfi1ab	100	65.835	Poecilia_mexicana
ENSPNAG00000027258	gfi1ab	100	59.069	ENSPMEG00000019299	GFI1	100	60.591	Poecilia_mexicana
ENSPNAG00000027258	gfi1ab	100	65.491	ENSPREG00000014097	gfi1ab	100	65.491	Poecilia_reticulata
ENSPNAG00000027258	gfi1ab	100	54.047	ENSPREG00000007997	GFI1	100	53.786	Poecilia_reticulata
ENSPNAG00000027258	gfi1ab	100	49.766	ENSPCAG00000011020	GFI1	100	49.766	Procavia_capensis
ENSPNAG00000027258	gfi1ab	100	60.000	ENSPCOG00000020540	GFI1	100	60.471	Propithecus_coquereli
ENSPNAG00000027258	gfi1ab	100	60.235	ENSPVAG00000006928	GFI1	100	61.176	Pteropus_vampyrus
ENSPNAG00000027258	gfi1ab	100	65.672	ENSPNYG00000021183	gfi1ab	100	65.672	Pundamilia_nyererei
ENSPNAG00000027258	gfi1ab	100	59.859	ENSRNOG00000002042	Gfi1	100	60.329	Rattus_norvegicus
ENSPNAG00000027258	gfi1ab	100	60.471	ENSRBIG00000036467	GFI1	100	61.176	Rhinopithecus_bieti
ENSPNAG00000027258	gfi1ab	100	60.471	ENSRROG00000031687	GFI1	100	61.176	Rhinopithecus_roxellana
ENSPNAG00000027258	gfi1ab	100	60.471	ENSSBOG00000031300	GFI1	100	61.176	Saimiri_boliviensis_boliviensis
ENSPNAG00000027258	gfi1ab	100	69.077	ENSSFOG00015020295	gfi1	100	69.077	Scleropages_formosus
ENSPNAG00000027258	gfi1ab	100	64.339	ENSSMAG00000002782	gfi1ab	100	64.589	Scophthalmus_maximus
ENSPNAG00000027258	gfi1ab	100	64.541	ENSSDUG00000022410	gfi1ab	100	64.796	Seriola_dumerili
ENSPNAG00000027258	gfi1ab	100	64.541	ENSSLDG00000020163	gfi1ab	100	64.796	Seriola_lalandi_dorsalis
ENSPNAG00000027258	gfi1ab	70	68.085	ENSSPAG00000009140	gfi1ab	90	68.440	Stegastes_partitus
ENSPNAG00000027258	gfi1ab	100	61.814	ENSSSCG00000006902	GFI1	100	62.053	Sus_scrofa
ENSPNAG00000027258	gfi1ab	84	66.962	ENSTGUG00000006060	GFI1	97	67.552	Taeniopygia_guttata
ENSPNAG00000027258	gfi1ab	100	65.316	ENSTRUG00000000415	gfi1ab	100	65.316	Takifugu_rubripes
ENSPNAG00000027258	gfi1ab	100	65.039	ENSTNIG00000000651	gfi1ab	97	65.228	Tetraodon_nigroviridis
ENSPNAG00000027258	gfi1ab	100	60.808	ENSTTRG00000000082	GFI1	100	60.808	Tursiops_truncatus
ENSPNAG00000027258	gfi1ab	100	62.319	ENSUAMG00000021124	GFI1	91	63.902	Ursus_americanus
ENSPNAG00000027258	gfi1ab	100	61.929	ENSXETG00000023006	gfi1	98	62.437	Xenopus_tropicalis
ENSPNAG00000027258	gfi1ab	100	65.915	ENSXMAG00000010523	gfi1ab	100	65.915	Xiphophorus_maculatus
ENSPNAG00000027258	gfi1ab	100	45.794	ENSXMAG00000009274	GFI1	86	48.019	Xiphophorus_maculatus