EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000027454 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 3846 bases
Position: chrKV576438.1:17541-21386
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000020570	RVT_1	PF00078.27	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000031393	-	486	-	ENSPNAP00000020570	161 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000027454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000027454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000027454	-	70	48.673	ENSPNAG00000024994	-	63	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000027454	-	60	57.732	ENSCVAG00000019758	-	68	57.732	Cyprinodon_variegatus
ENSPNAG00000027454	-	65	48.571	ENSIPUG00000004434	-	54	48.936	Ictalurus_punctatus
ENSPNAG00000027454	-	59	54.167	ENSIPUG00000017481	-	50	55.556	Ictalurus_punctatus
ENSPNAG00000027454	-	59	54.167	ENSIPUG00000017577	-	50	55.556	Ictalurus_punctatus
ENSPNAG00000027454	-	90	47.586	ENSLBEG00000023048	-	51	47.945	Labrus_bergylta
ENSPNAG00000027454	-	74	46.667	ENSLBEG00000020214	-	75	46.667	Labrus_bergylta
ENSPNAG00000027454	-	61	44.898	ENSMMOG00000010846	-	55	45.361	Mola_mola