EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000027459 (Gene tree)
Gene ID: 108439899
Gene Symbol: cnot3b
Alias: cnot3|wu:fi20g07|zgc:55934
Full Name: CCR4-NOT transcription complex subunit 3-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 22780 bases
Position: chrKV575617.1:525085-547864
Accession: 108439899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000020486	Not3	PF04065.15	8.2e-96	1	1
ENSPNAP00000020495	Not3	PF04065.15	8.4e-96	1	1
ENSPNAP00000020464	Not3	PF04065.15	8.6e-96	1	1
ENSPNAP00000020486	NOT2_3_5	PF04153.18	2.3e-39	1	1
ENSPNAP00000020495	NOT2_3_5	PF04153.18	2.3e-39	1	1
ENSPNAP00000020464	NOT2_3_5	PF04153.18	5.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000031108	-	4442	XM_017718556	ENSPNAP00000020495	914 (aa)	XP_017574045	UPI000814860A
ENSPNAT00000031081	-	4409	XM_017718559	ENSPNAP00000020486	903 (aa)	XP_017574048	UPI0008145331
ENSPNAT00000040043	-	2733	-	ENSPNAP00000020464	910 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000027459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000027459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000027459	cnot3b	100	64.968	ENSPNAG00000017679	cnot3a	92	92.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000027459	cnot3b	68	90.461	ENSG00000088038	CNOT3	100	93.814	Homo_sapiens
ENSPNAG00000027459	cnot3b	55	94.017	ENSAPOG00000015499	CNOT3	93	81.851	Acanthochromis_polyacanthus
ENSPNAG00000027459	cnot3b	56	89.892	ENSAPOG00000015002	cnot3b	99	85.957	Acanthochromis_polyacanthus
ENSPNAG00000027459	cnot3b	68	90.789	ENSAMEG00000004528	CNOT3	97	90.492	Ailuropoda_melanoleuca
ENSPNAG00000027459	cnot3b	69	94.017	ENSACIG00000006635	cnot3a	100	94.017	Amphilophus_citrinellus
ENSPNAG00000027459	cnot3b	68	91.518	ENSACIG00000003652	cnot3b	99	91.518	Amphilophus_citrinellus
ENSPNAG00000027459	cnot3b	97	66.704	ENSAOCG00000018385	-	98	78.469	Amphiprion_ocellaris
ENSPNAG00000027459	cnot3b	97	70.267	ENSAPEG00000002640	cnot3b	98	93.810	Amphiprion_percula
ENSPNAG00000027459	cnot3b	100	68.021	ENSATEG00000022737	cnot3a	100	68.240	Anabas_testudineus
ENSPNAG00000027459	cnot3b	100	72.340	ENSATEG00000015777	cnot3b	100	73.163	Anabas_testudineus
ENSPNAG00000027459	cnot3b	68	89.902	ENSACAG00000016085	CNOT3	89	90.461	Anolis_carolinensis
ENSPNAG00000027459	cnot3b	68	90.461	ENSANAG00000025756	CNOT3	97	90.164	Aotus_nancymaae
ENSPNAG00000027459	cnot3b	100	73.441	ENSACLG00000016702	cnot3b	100	72.970	Astatotilapia_calliptera
ENSPNAG00000027459	cnot3b	100	87.555	ENSAMXG00000009447	cnot3b	100	99.398	Astyanax_mexicanus
ENSPNAG00000027459	cnot3b	100	67.492	ENSAMXG00000012359	cnot3a	100	69.924	Astyanax_mexicanus
ENSPNAG00000027459	cnot3b	68	90.461	ENSBTAG00000014900	CNOT3	89	90.164	Bos_taurus
ENSPNAG00000027459	cnot3b	68	90.461	ENSCJAG00000001094	CNOT3	97	90.164	Callithrix_jacchus
ENSPNAG00000027459	cnot3b	72	80.508	ENSCAFG00000002699	CNOT3	96	90.164	Canis_familiaris
ENSPNAG00000027459	cnot3b	72	80.508	ENSCAFG00020018359	CNOT3	96	90.164	Canis_lupus_dingo
ENSPNAG00000027459	cnot3b	68	88.449	ENSCHIG00000015302	CNOT3	91	88.489	Capra_hircus
ENSPNAG00000027459	cnot3b	68	90.461	ENSTSYG00000008058	CNOT3	97	90.164	Carlito_syrichta
ENSPNAG00000027459	cnot3b	72	80.508	ENSCAPG00000009533	CNOT3	85	90.164	Cavia_aperea
ENSPNAG00000027459	cnot3b	81	80.508	ENSCPOG00000020741	CNOT3	98	90.164	Cavia_porcellus
ENSPNAG00000027459	cnot3b	68	90.461	ENSCCAG00000036290	CNOT3	97	90.164	Cebus_capucinus
ENSPNAG00000027459	cnot3b	68	90.461	ENSCATG00000030324	CNOT3	100	90.164	Cercocebus_atys
ENSPNAG00000027459	cnot3b	92	72.000	ENSCLAG00000003302	CNOT3	100	90.164	Chinchilla_lanigera
ENSPNAG00000027459	cnot3b	68	90.461	ENSCSAG00000001900	CNOT3	97	90.164	Chlorocebus_sabaeus
ENSPNAG00000027459	cnot3b	69	90.228	ENSCPBG00000011655	CNOT3	97	90.492	Chrysemys_picta_bellii
ENSPNAG00000027459	cnot3b	74	57.093	ENSCING00000000293	-	71	66.529	Ciona_intestinalis
ENSPNAG00000027459	cnot3b	68	90.461	ENSCANG00000013408	CNOT3	97	90.164	Colobus_angolensis_palliatus
ENSPNAG00000027459	cnot3b	81	80.791	ENSCGRG00001000855	Cnot3	98	89.836	Cricetulus_griseus_chok1gshd
ENSPNAG00000027459	cnot3b	100	67.842	ENSCSEG00000003574	cnot3a	100	68.090	Cynoglossus_semilaevis
ENSPNAG00000027459	cnot3b	100	62.473	ENSCSEG00000016892	cnot3b	97	75.527	Cynoglossus_semilaevis
ENSPNAG00000027459	cnot3b	100	69.405	ENSCVAG00000022122	cnot3b	100	69.063	Cyprinodon_variegatus
ENSPNAG00000027459	cnot3b	100	77.802	ENSDARG00000019842	cnot3b	100	78.438	Danio_rerio
ENSPNAG00000027459	cnot3b	100	66.346	ENSDARG00000007135	cnot3a	100	67.167	Danio_rerio
ENSPNAG00000027459	cnot3b	68	90.132	ENSDNOG00000045972	CNOT3	97	89.836	Dasypus_novemcinctus
ENSPNAG00000027459	cnot3b	69	90.461	ENSDORG00000008021	Cnot3	98	90.164	Dipodomys_ordii
ENSPNAG00000027459	cnot3b	52	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSPNAG00000027459	cnot3b	71	70.684	ENSEBUG00000010437	cnot3a	93	68.078	Eptatretus_burgeri
ENSPNAG00000027459	cnot3b	68	90.461	ENSEASG00005021591	CNOT3	97	90.164	Equus_asinus_asinus
ENSPNAG00000027459	cnot3b	68	90.461	ENSECAG00000023181	CNOT3	97	90.164	Equus_caballus
ENSPNAG00000027459	cnot3b	100	66.206	ENSELUG00000014743	cnot3a	100	67.865	Esox_lucius
ENSPNAG00000027459	cnot3b	100	73.397	ENSELUG00000000953	cnot3b	100	73.774	Esox_lucius
ENSPNAG00000027459	cnot3b	68	90.461	ENSFCAG00000014042	CNOT3	97	90.164	Felis_catus
ENSPNAG00000027459	cnot3b	100	65.798	ENSFHEG00000023166	cnot3a	97	94.444	Fundulus_heteroclitus
ENSPNAG00000027459	cnot3b	100	69.075	ENSFHEG00000001696	cnot3b	100	69.346	Fundulus_heteroclitus
ENSPNAG00000027459	cnot3b	94	62.942	ENSGMOG00000005365	cnot3a	98	64.106	Gadus_morhua
ENSPNAG00000027459	cnot3b	100	70.964	ENSGAFG00000003459	cnot3b	100	70.098	Gambusia_affinis
ENSPNAG00000027459	cnot3b	100	67.283	ENSGAFG00000013094	cnot3a	100	67.752	Gambusia_affinis
ENSPNAG00000027459	cnot3b	70	89.286	ENSGAGG00000012677	CNOT3	99	89.286	Gopherus_agassizii
ENSPNAG00000027459	cnot3b	68	90.461	ENSGGOG00000012996	CNOT3	97	90.164	Gorilla_gorilla
ENSPNAG00000027459	cnot3b	99	66.811	ENSHBUG00000019699	cnot3b	99	65.625	Haplochromis_burtoni
ENSPNAG00000027459	cnot3b	72	81.871	ENSHGLG00000008821	CNOT3	98	90.164	Heterocephalus_glaber_female
ENSPNAG00000027459	cnot3b	60	83.908	ENSHGLG00100006181	CNOT3	100	81.609	Heterocephalus_glaber_male
ENSPNAG00000027459	cnot3b	95	57.271	ENSHCOG00000020968	cnot3a	100	68.133	Hippocampus_comes
ENSPNAG00000027459	cnot3b	100	61.481	ENSIPUG00000000167	cnot3	93	92.735	Ictalurus_punctatus
ENSPNAG00000027459	cnot3b	100	78.477	ENSIPUG00000009046	cnot3b	100	78.477	Ictalurus_punctatus
ENSPNAG00000027459	cnot3b	69	90.461	ENSSTOG00000028248	CNOT3	96	90.164	Ictidomys_tridecemlineatus
ENSPNAG00000027459	cnot3b	69	90.132	ENSJJAG00000014594	Cnot3	96	89.836	Jaculus_jaculus
ENSPNAG00000027459	cnot3b	100	70.215	ENSKMAG00000018723	cnot3b	100	71.567	Kryptolebias_marmoratus
ENSPNAG00000027459	cnot3b	100	68.143	ENSKMAG00000004863	cnot3a	100	93.373	Kryptolebias_marmoratus
ENSPNAG00000027459	cnot3b	62	88.672	ENSLBEG00000017296	cnot3a	89	88.652	Labrus_bergylta
ENSPNAG00000027459	cnot3b	96	71.477	ENSLBEG00000018278	cnot3b	99	72.666	Labrus_bergylta
ENSPNAG00000027459	cnot3b	68	89.145	ENSLACG00000009742	CNOT3	98	88.852	Latimeria_chalumnae
ENSPNAG00000027459	cnot3b	59	96.685	ENSLOCG00000000005	cnot3b	84	98.795	Lepisosteus_oculatus
ENSPNAG00000027459	cnot3b	68	89.836	ENSLAFG00000022133	CNOT3	98	89.542	Loxodonta_africana
ENSPNAG00000027459	cnot3b	68	90.461	ENSMFAG00000040073	CNOT3	97	90.164	Macaca_fascicularis
ENSPNAG00000027459	cnot3b	61	92.017	ENSMMUG00000009698	CNOT3	100	98.039	Macaca_mulatta
ENSPNAG00000027459	cnot3b	68	90.461	ENSMNEG00000036750	CNOT3	97	90.164	Macaca_nemestrina
ENSPNAG00000027459	cnot3b	68	90.461	ENSMLEG00000036579	CNOT3	97	90.164	Mandrillus_leucophaeus
ENSPNAG00000027459	cnot3b	100	72.999	ENSMAMG00000019357	cnot3b	100	74.573	Mastacembelus_armatus
ENSPNAG00000027459	cnot3b	100	73.786	ENSMZEG00005002466	cnot3b	100	73.312	Maylandia_zebra
ENSPNAG00000027459	cnot3b	72	80.791	ENSMAUG00000014996	Cnot3	98	89.836	Mesocricetus_auratus
ENSPNAG00000027459	cnot3b	69	87.975	ENSMICG00000002370	CNOT3	96	90.164	Microcebus_murinus
ENSPNAG00000027459	cnot3b	50	100.000	ENSMOCG00000013249	Cnot3	57	85.668	Microtus_ochrogaster
ENSPNAG00000027459	cnot3b	100	66.486	ENSMMOG00000016446	cnot3a	100	66.955	Mola_mola
ENSPNAG00000027459	cnot3b	68	90.598	ENSMMOG00000013086	cnot3b	98	90.598	Mola_mola
ENSPNAG00000027459	cnot3b	60	90.461	ENSMODG00000004066	CNOT3	97	90.164	Monodelphis_domestica
ENSPNAG00000027459	cnot3b	58	88.176	ENSMALG00000004936	cnot3b	87	89.011	Monopterus_albus
ENSPNAG00000027459	cnot3b	100	67.707	ENSMALG00000009204	cnot3a	100	69.164	Monopterus_albus
ENSPNAG00000027459	cnot3b	81	71.294	MGP_CAROLIEiJ_G0029095	Cnot3	100	96.000	Mus_caroli
ENSPNAG00000027459	cnot3b	81	71.294	ENSMUSG00000035632	Cnot3	100	96.000	Mus_musculus
ENSPNAG00000027459	cnot3b	81	71.529	MGP_PahariEiJ_G0020964	Cnot3	100	96.000	Mus_pahari
ENSPNAG00000027459	cnot3b	81	71.294	MGP_SPRETEiJ_G0030148	Cnot3	100	96.000	Mus_spretus
ENSPNAG00000027459	cnot3b	68	90.461	ENSMPUG00000010352	CNOT3	97	90.164	Mustela_putorius_furo
ENSPNAG00000027459	cnot3b	67	90.461	ENSNGAG00000013266	Cnot3	98	90.164	Nannospalax_galili
ENSPNAG00000027459	cnot3b	88	76.389	ENSNBRG00000003336	cnot3b	97	88.053	Neolamprologus_brichardi
ENSPNAG00000027459	cnot3b	68	90.461	ENSNLEG00000006272	CNOT3	98	90.164	Nomascus_leucogenys
ENSPNAG00000027459	cnot3b	79	90.461	ENSODEG00000000705	CNOT3	100	89.873	Octodon_degus
ENSPNAG00000027459	cnot3b	100	74.298	ENSONIG00000007047	cnot3b	100	74.006	Oreochromis_niloticus
ENSPNAG00000027459	cnot3b	68	90.461	ENSOCUG00000007691	CNOT3	97	90.164	Oryctolagus_cuniculus
ENSPNAG00000027459	cnot3b	100	72.331	ENSORLG00000005982	cnot3b	100	72.530	Oryzias_latipes
ENSPNAG00000027459	cnot3b	100	72.628	ENSORLG00020005779	cnot3b	100	72.126	Oryzias_latipes_hni
ENSPNAG00000027459	cnot3b	100	71.926	ENSORLG00015019021	cnot3b	100	71.690	Oryzias_latipes_hsok
ENSPNAG00000027459	cnot3b	100	72.530	ENSOMEG00000015557	cnot3b	100	70.982	Oryzias_melastigma
ENSPNAG00000027459	cnot3b	100	68.743	ENSOMEG00000010309	cnot3a	97	90.000	Oryzias_melastigma
ENSPNAG00000027459	cnot3b	70	86.196	ENSOGAG00000006945	CNOT3	97	90.164	Otolemur_garnettii
ENSPNAG00000027459	cnot3b	68	90.461	ENSPPAG00000002748	CNOT3	97	90.164	Pan_paniscus
ENSPNAG00000027459	cnot3b	68	90.461	ENSPPRG00000011705	CNOT3	97	90.164	Panthera_pardus
ENSPNAG00000027459	cnot3b	62	90.604	ENSPTIG00000008781	CNOT3	96	90.604	Panthera_tigris_altaica
ENSPNAG00000027459	cnot3b	68	90.461	ENSPTRG00000046717	-	97	90.164	Pan_troglodytes
ENSPNAG00000027459	cnot3b	68	90.461	ENSPTRG00000011444	CNOT3	97	90.164	Pan_troglodytes
ENSPNAG00000027459	cnot3b	68	90.461	ENSPANG00000009375	CNOT3	97	90.164	Papio_anubis
ENSPNAG00000027459	cnot3b	97	69.809	ENSPKIG00000015967	-	99	95.726	Paramormyrops_kingsleyae
ENSPNAG00000027459	cnot3b	100	69.905	ENSPKIG00000011733	CNOT3	100	70.539	Paramormyrops_kingsleyae
ENSPNAG00000027459	cnot3b	98	63.696	ENSPMGG00000022539	cnot3b	99	64.270	Periophthalmus_magnuspinnatus
ENSPNAG00000027459	cnot3b	90	70.824	ENSPEMG00000024185	Cnot3	98	89.836	Peromyscus_maniculatus_bairdii
ENSPNAG00000027459	cnot3b	68	90.132	ENSPCIG00000023018	CNOT3	98	89.836	Phascolarctos_cinereus
ENSPNAG00000027459	cnot3b	100	71.522	ENSPFOG00000007168	cnot3b	100	71.087	Poecilia_formosa
ENSPNAG00000027459	cnot3b	75	89.667	ENSPFOG00000008693	cnot3a	99	87.742	Poecilia_formosa
ENSPNAG00000027459	cnot3b	100	71.522	ENSPLAG00000013457	cnot3b	100	71.087	Poecilia_latipinna
ENSPNAG00000027459	cnot3b	100	71.723	ENSPMEG00000010184	cnot3b	100	71.304	Poecilia_mexicana
ENSPNAG00000027459	cnot3b	99	68.132	ENSPREG00000000662	cnot3b	97	66.373	Poecilia_reticulata
ENSPNAG00000027459	cnot3b	64	93.617	ENSPREG00000007592	cnot3a	100	90.726	Poecilia_reticulata
ENSPNAG00000027459	cnot3b	68	90.132	ENSPPYG00000010372	CNOT3	97	89.836	Pongo_abelii
ENSPNAG00000027459	cnot3b	52	94.068	ENSPCAG00000011999	CNOT3	56	94.068	Procavia_capensis
ENSPNAG00000027459	cnot3b	69	87.975	ENSPCOG00000017673	CNOT3	96	90.164	Propithecus_coquereli
ENSPNAG00000027459	cnot3b	74	81.948	ENSPVAG00000015564	CNOT3	97	90.164	Pteropus_vampyrus
ENSPNAG00000027459	cnot3b	99	67.535	ENSPNYG00000003358	cnot3b	99	67.098	Pundamilia_nyererei
ENSPNAG00000027459	cnot3b	81	71.529	ENSRNOG00000053234	Cnot3	91	90.323	Rattus_norvegicus
ENSPNAG00000027459	cnot3b	81	72.000	ENSRBIG00000031025	CNOT3	98	90.164	Rhinopithecus_bieti
ENSPNAG00000027459	cnot3b	81	72.235	ENSRROG00000003872	CNOT3	97	90.164	Rhinopithecus_roxellana
ENSPNAG00000027459	cnot3b	68	90.461	ENSSBOG00000030268	CNOT3	97	90.164	Saimiri_boliviensis_boliviensis
ENSPNAG00000027459	cnot3b	100	74.102	ENSSFOG00015000248	cnot3	100	73.753	Scleropages_formosus
ENSPNAG00000027459	cnot3b	100	70.820	ENSSFOG00015019203	-	100	73.593	Scleropages_formosus
ENSPNAG00000027459	cnot3b	100	70.913	ENSSMAG00000016031	cnot3b	100	71.368	Scophthalmus_maximus
ENSPNAG00000027459	cnot3b	81	94.444	ENSSDUG00000008181	cnot3a	100	94.444	Seriola_dumerili
ENSPNAG00000027459	cnot3b	100	74.047	ENSSDUG00000003428	cnot3b	100	74.814	Seriola_dumerili
ENSPNAG00000027459	cnot3b	100	73.941	ENSSLDG00000014376	cnot3b	100	74.708	Seriola_lalandi_dorsalis
ENSPNAG00000027459	cnot3b	80	80.165	ENSSPUG00000008510	CNOT3	89	90.164	Sphenodon_punctatus
ENSPNAG00000027459	cnot3b	63	90.234	ENSSPAG00000003858	cnot3a	94	90.036	Stegastes_partitus
ENSPNAG00000027459	cnot3b	100	73.983	ENSSPAG00000001429	cnot3b	100	75.161	Stegastes_partitus
ENSPNAG00000027459	cnot3b	68	90.461	ENSSSCG00000003264	CNOT3	97	90.164	Sus_scrofa
ENSPNAG00000027459	cnot3b	100	89.175	ENSTRUG00000007248	cnot3b	89	96.386	Takifugu_rubripes
ENSPNAG00000027459	cnot3b	94	68.083	ENSTNIG00000005663	cnot3b	100	66.667	Tetraodon_nigroviridis
ENSPNAG00000027459	cnot3b	68	90.789	ENSUAMG00000005234	CNOT3	97	90.492	Ursus_americanus
ENSPNAG00000027459	cnot3b	60	88.889	ENSUMAG00000010934	CNOT3	92	89.606	Ursus_maritimus
ENSPNAG00000027459	cnot3b	72	80.508	ENSVVUG00000008239	CNOT3	96	90.164	Vulpes_vulpes
ENSPNAG00000027459	cnot3b	100	59.611	ENSXETG00000003166	cnot3	97	88.673	Xenopus_tropicalis
ENSPNAG00000027459	cnot3b	100	66.193	ENSXCOG00000019460	cnot3a	98	94.017	Xiphophorus_couchianus
ENSPNAG00000027459	cnot3b	96	67.869	ENSXCOG00000018976	cnot3b	99	67.381	Xiphophorus_couchianus
ENSPNAG00000027459	cnot3b	100	70.311	ENSXMAG00000014176	cnot3b	100	70.824	Xiphophorus_maculatus
ENSPNAG00000027459	cnot3b	100	68.018	ENSXMAG00000012273	cnot3a	100	67.888	Xiphophorus_maculatus