EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000027547 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 1708 bases
Position: chrKV575569.1:927219-928926
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000020643	RVT_1	PF00078.27	3.8e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000031379	-	1708	-	ENSPNAP00000020643	550 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000027547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000027547's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000027547	-	65	31.944	ENSPNAG00000011741	-	83	31.944
ENSPNAG00000027547	-	52	43.956	ENSPNAG00000009300	-	92	43.956
ENSPNAG00000027547	-	57	36.392	ENSPNAG00000016568	-	85	36.392
ENSPNAG00000027547	-	63	40.401	ENSPNAG00000014375	-	85	40.401
ENSPNAG00000027547	-	83	32.826	ENSPNAG00000002067	-	99	32.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000027547	-	77	47.183	ENSAPEG00000021324	-	100	47.183	Amphiprion_percula
ENSPNAG00000027547	-	89	47.336	ENSAPEG00000013789	-	66	47.336	Amphiprion_percula
ENSPNAG00000027547	-	69	40.617	ENSACLG00000005315	-	85	40.617	Astatotilapia_calliptera
ENSPNAG00000027547	-	65	38.827	ENSACLG00000019432	-	79	38.827	Astatotilapia_calliptera
ENSPNAG00000027547	-	77	34.752	ENSCVAG00000009961	-	83	34.752	Cyprinodon_variegatus
ENSPNAG00000027547	-	100	36.331	ENSDARG00000099418	CABZ01030017.1	51	36.331	Danio_rerio
ENSPNAG00000027547	-	66	44.475	ENSFHEG00000014931	-	67	44.475	Fundulus_heteroclitus
ENSPNAG00000027547	-	66	39.335	ENSHBUG00000015481	-	91	39.335	Haplochromis_burtoni
ENSPNAG00000027547	-	53	36.735	ENSKMAG00000014672	-	56	36.735	Kryptolebias_marmoratus
ENSPNAG00000027547	-	50	36.232	ENSLBEG00000015744	-	99	36.232	Labrus_bergylta
ENSPNAG00000027547	-	65	41.111	ENSLBEG00000012683	-	91	41.111	Labrus_bergylta
ENSPNAG00000027547	-	55	37.954	ENSLBEG00000015833	-	73	37.954	Labrus_bergylta
ENSPNAG00000027547	-	52	33.910	ENSMZEG00005014401	-	81	33.910	Maylandia_zebra
ENSPNAG00000027547	-	60	35.030	ENSONIG00000020621	-	100	35.030	Oreochromis_niloticus
ENSPNAG00000027547	-	64	42.017	ENSORLG00000022016	-	65	42.017	Oryzias_latipes
ENSPNAG00000027547	-	61	31.138	ENSORLG00000030232	-	50	30.457	Oryzias_latipes
ENSPNAG00000027547	-	79	40.275	ENSORLG00000028717	-	97	40.275	Oryzias_latipes
ENSPNAG00000027547	-	56	30.000	ENSORLG00000027739	-	94	30.000	Oryzias_latipes
ENSPNAG00000027547	-	98	33.698	ENSORLG00020005447	-	94	33.698	Oryzias_latipes_hni
ENSPNAG00000027547	-	68	50.266	ENSORLG00020017190	-	87	50.266	Oryzias_latipes_hni
ENSPNAG00000027547	-	69	45.220	ENSORLG00015013361	-	99	45.220	Oryzias_latipes_hsok
ENSPNAG00000027547	-	54	43.434	ENSPKIG00000025567	-	68	43.434	Paramormyrops_kingsleyae
ENSPNAG00000027547	-	81	34.437	ENSPKIG00000013191	-	95	34.437	Paramormyrops_kingsleyae
ENSPNAG00000027547	-	77	35.431	ENSPKIG00000004060	-	99	35.431	Paramormyrops_kingsleyae
ENSPNAG00000027547	-	78	43.721	ENSPFOG00000024165	-	99	43.721	Poecilia_formosa
ENSPNAG00000027547	-	53	30.928	ENSPFOG00000024190	-	62	30.928	Poecilia_formosa
ENSPNAG00000027547	-	76	36.321	ENSPNYG00000005142	-	90	36.321	Pundamilia_nyererei
ENSPNAG00000027547	-	99	34.420	ENSXMAG00000028904	-	56	34.420	Xiphophorus_maculatus