EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000027824 (Gene tree)
Gene ID: 108439322
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 12701 bases
Position: chrKV575590.1:758825-771525
Accession: 108439322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000036665	ResIII	PF04851.15	3.9e-11	1	1
ENSPNAP00000036657	ResIII	PF04851.15	4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000031563	SMARCA5-202	3820	XM_017717658	ENSPNAP00000036657	1034 (aa)	XP_017573147	UPI0008149944
ENSPNAT00000031538	SMARCA5-201	2970	-	ENSPNAP00000036665	989 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000027824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000027824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000027824	SMARCA5	52	42.757	ENSPNAG00000029968	hells	73	42.757
ENSPNAG00000027824	SMARCA5	55	44.669	ENSPNAG00000011881	chd1l	52	44.669

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000027824	SMARCA5	97	90.145	ENSG00000153147	SMARCA5	97	88.039	Homo_sapiens
ENSPNAG00000027824	SMARCA5	97	90.456	ENSAMEG00000009585	SMARCA5	97	88.235	Ailuropoda_melanoleuca
ENSPNAG00000027824	SMARCA5	96	90.402	ENSAPLG00000009206	SMARCA5	99	90.515	Anas_platyrhynchos
ENSPNAG00000027824	SMARCA5	97	90.654	ENSACAG00000003038	SMARCA5	100	87.344	Anolis_carolinensis
ENSPNAG00000027824	SMARCA5	97	90.249	ENSANAG00000019345	SMARCA5	99	89.558	Aotus_nancymaae
ENSPNAG00000027824	SMARCA5	97	90.456	ENSBTAG00000003399	SMARCA5	97	88.333	Bos_taurus
ENSPNAG00000027824	SMARCA5	97	90.249	ENSCJAG00000002735	SMARCA5	97	87.941	Callithrix_jacchus
ENSPNAG00000027824	SMARCA5	97	90.456	ENSCAFG00000007525	SMARCA5	97	88.333	Canis_familiaris
ENSPNAG00000027824	SMARCA5	97	90.550	ENSCAFG00020025641	SMARCA5	96	88.477	Canis_lupus_dingo
ENSPNAG00000027824	SMARCA5	97	88.797	ENSCHIG00000016375	-	98	86.569	Capra_hircus
ENSPNAG00000027824	SMARCA5	97	90.456	ENSCHIG00000013730	-	97	88.137	Capra_hircus
ENSPNAG00000027824	SMARCA5	97	90.353	ENSTSYG00000009954	SMARCA5	99	89.940	Carlito_syrichta
ENSPNAG00000027824	SMARCA5	96	90.727	ENSCAPG00000013747	SMARCA5	95	90.712	Cavia_aperea
ENSPNAG00000027824	SMARCA5	97	90.041	ENSCPOG00000002259	SMARCA5	99	86.290	Cavia_porcellus
ENSPNAG00000027824	SMARCA5	97	90.249	ENSCCAG00000027215	SMARCA5	99	89.558	Cebus_capucinus
ENSPNAG00000027824	SMARCA5	97	90.145	ENSCATG00000044917	SMARCA5	97	88.039	Cercocebus_atys
ENSPNAG00000027824	SMARCA5	97	90.145	ENSCLAG00000006153	SMARCA5	99	89.909	Chinchilla_lanigera
ENSPNAG00000027824	SMARCA5	96	91.245	ENSCSAG00000003448	SMARCA5	100	91.031	Chlorocebus_sabaeus
ENSPNAG00000027824	SMARCA5	87	90.559	ENSCHOG00000011724	SMARCA5	83	90.444	Choloepus_hoffmanni
ENSPNAG00000027824	SMARCA5	97	90.466	ENSCPBG00000027535	SMARCA5	98	88.725	Chrysemys_picta_bellii
ENSPNAG00000027824	SMARCA5	97	90.145	ENSCANG00000041629	SMARCA5	97	88.137	Colobus_angolensis_palliatus
ENSPNAG00000027824	SMARCA5	97	90.249	ENSCGRG00001012719	Smarca5	97	88.235	Cricetulus_griseus_chok1gshd
ENSPNAG00000027824	SMARCA5	97	90.249	ENSCGRG00000001417	Smarca5	99	89.569	Cricetulus_griseus_crigri
ENSPNAG00000027824	SMARCA5	97	88.174	ENSDNOG00000009158	SMARCA5	97	85.882	Dasypus_novemcinctus
ENSPNAG00000027824	SMARCA5	97	82.970	ENSDORG00000003466	Smarca5	97	83.246	Dipodomys_ordii
ENSPNAG00000027824	SMARCA5	94	84.125	ENSEBUG00000014773	SMARCA5	96	83.695	Eptatretus_burgeri
ENSPNAG00000027824	SMARCA5	97	90.456	ENSEASG00005001866	SMARCA5	98	91.869	Equus_asinus_asinus
ENSPNAG00000027824	SMARCA5	97	90.456	ENSECAG00000002676	SMARCA5	97	88.137	Equus_caballus
ENSPNAG00000027824	SMARCA5	97	86.411	ENSEEUG00000013176	SMARCA5	99	86.276	Erinaceus_europaeus
ENSPNAG00000027824	SMARCA5	96	93.579	ENSELUG00000014653	SMARCA5	99	93.705	Esox_lucius
ENSPNAG00000027824	SMARCA5	97	90.456	ENSFCAG00000004544	SMARCA5	97	88.235	Felis_catus
ENSPNAG00000027824	SMARCA5	96	92.097	ENSFALG00000004987	SMARCA5	100	92.165	Ficedula_albicollis
ENSPNAG00000027824	SMARCA5	97	90.249	ENSFDAG00000021016	SMARCA5	99	90.010	Fukomys_damarensis
ENSPNAG00000027824	SMARCA5	97	92.469	ENSGMOG00000007519	SMARCA5	100	89.327	Gadus_morhua
ENSPNAG00000027824	SMARCA5	97	90.881	ENSGALG00000009913	SMARCA5	100	88.162	Gallus_gallus
ENSPNAG00000027824	SMARCA5	100	89.971	ENSGACG00000017238	SMARCA5	100	90.260	Gasterosteus_aculeatus
ENSPNAG00000027824	SMARCA5	97	90.570	ENSGAGG00000019882	SMARCA5	98	88.922	Gopherus_agassizii
ENSPNAG00000027824	SMARCA5	97	90.145	ENSGGOG00000012595	SMARCA5	99	89.909	Gorilla_gorilla
ENSPNAG00000027824	SMARCA5	97	90.145	ENSHGLG00000000816	-	95	88.955	Heterocephalus_glaber_female
ENSPNAG00000027824	SMARCA5	97	81.950	ENSHGLG00000000317	-	98	79.397	Heterocephalus_glaber_female
ENSPNAG00000027824	SMARCA5	97	90.145	ENSHGLG00100018421	-	99	89.909	Heterocephalus_glaber_male
ENSPNAG00000027824	SMARCA5	98	89.652	ENSSTOG00000010683	SMARCA5	97	88.333	Ictidomys_tridecemlineatus
ENSPNAG00000027824	SMARCA5	97	90.249	ENSJJAG00000014965	Smarca5	97	88.149	Jaculus_jaculus
ENSPNAG00000027824	SMARCA5	96	91.763	ENSLACG00000007091	SMARCA5	99	89.321	Latimeria_chalumnae
ENSPNAG00000027824	SMARCA5	98	92.806	ENSLOCG00000008966	SMARCA5	100	90.472	Lepisosteus_oculatus
ENSPNAG00000027824	SMARCA5	97	90.456	ENSLAFG00000007795	SMARCA5	97	88.333	Loxodonta_africana
ENSPNAG00000027824	SMARCA5	97	90.145	ENSMFAG00000043649	SMARCA5	97	88.039	Macaca_fascicularis
ENSPNAG00000027824	SMARCA5	96	91.341	ENSMMUG00000000829	SMARCA5	97	91.341	Macaca_mulatta
ENSPNAG00000027824	SMARCA5	97	90.145	ENSMNEG00000031916	SMARCA5	97	88.039	Macaca_nemestrina
ENSPNAG00000027824	SMARCA5	97	90.145	ENSMLEG00000042393	SMARCA5	97	88.039	Mandrillus_leucophaeus
ENSPNAG00000027824	SMARCA5	98	89.898	ENSMGAG00000003517	SMARCA5	99	90.419	Meleagris_gallopavo
ENSPNAG00000027824	SMARCA5	97	90.249	ENSMAUG00000015902	Smarca5	97	90.010	Mesocricetus_auratus
ENSPNAG00000027824	SMARCA5	97	90.353	ENSMICG00000003971	SMARCA5	99	88.778	Microcebus_murinus
ENSPNAG00000027824	SMARCA5	97	90.041	ENSMOCG00000016986	-	97	88.149	Microtus_ochrogaster
ENSPNAG00000027824	SMARCA5	97	90.664	ENSMODG00000000391	SMARCA5	96	88.889	Monodelphis_domestica
ENSPNAG00000027824	SMARCA5	97	90.145	ENSMUSG00000031715	Smarca5	97	87.941	Mus_musculus
ENSPNAG00000027824	SMARCA5	97	90.249	MGP_PahariEiJ_G0022862	Smarca5	97	88.039	Mus_pahari
ENSPNAG00000027824	SMARCA5	97	90.456	ENSMLUG00000000468	SMARCA5	97	88.235	Myotis_lucifugus
ENSPNAG00000027824	SMARCA5	97	90.249	ENSNGAG00000000441	Smarca5	97	88.137	Nannospalax_galili
ENSPNAG00000027824	SMARCA5	97	90.145	ENSNLEG00000005383	SMARCA5	97	88.039	Nomascus_leucogenys
ENSPNAG00000027824	SMARCA5	92	88.035	ENSMEUG00000001267	SMARCA5	100	84.727	Notamacropus_eugenii
ENSPNAG00000027824	SMARCA5	89	94.764	ENSOPRG00000014427	SMARCA5	86	94.764	Ochotona_princeps
ENSPNAG00000027824	SMARCA5	96	91.772	ENSOANG00000013921	SMARCA5	100	91.649	Ornithorhynchus_anatinus
ENSPNAG00000027824	SMARCA5	96	91.456	ENSOCUG00000013042	SMARCA5	100	91.237	Oryctolagus_cuniculus
ENSPNAG00000027824	SMARCA5	97	90.353	ENSOGAG00000009702	SMARCA5	96	88.473	Otolemur_garnettii
ENSPNAG00000027824	SMARCA5	97	90.456	ENSOARG00000010589	SMARCA5	99	86.290	Ovis_aries
ENSPNAG00000027824	SMARCA5	96	91.245	ENSPPAG00000028523	SMARCA5	99	90.010	Pan_paniscus
ENSPNAG00000027824	SMARCA5	97	85.270	ENSPPRG00000004925	SMARCA5	97	84.118	Panthera_pardus
ENSPNAG00000027824	SMARCA5	97	90.456	ENSPTIG00000020959	SMARCA5	97	88.594	Panthera_tigris_altaica
ENSPNAG00000027824	SMARCA5	97	90.145	ENSPTRG00000016472	SMARCA5	99	89.909	Pan_troglodytes
ENSPNAG00000027824	SMARCA5	97	90.145	ENSPANG00000001175	SMARCA5	97	88.039	Papio_anubis
ENSPNAG00000027824	SMARCA5	97	94.381	ENSPKIG00000015699	SMARCA5	98	93.846	Paramormyrops_kingsleyae
ENSPNAG00000027824	SMARCA5	98	92.033	ENSPKIG00000015885	SMARCA5	100	93.705	Paramormyrops_kingsleyae
ENSPNAG00000027824	SMARCA5	98	88.090	ENSPSIG00000004177	SMARCA5	99	88.353	Pelodiscus_sinensis
ENSPNAG00000027824	SMARCA5	96	94.111	ENSPMGG00000012316	SMARCA5	100	94.130	Periophthalmus_magnuspinnatus
ENSPNAG00000027824	SMARCA5	97	90.249	ENSPEMG00000008060	Smarca5	98	89.749	Peromyscus_maniculatus_bairdii
ENSPNAG00000027824	SMARCA5	96	71.144	ENSPMAG00000006011	SMARCA5	82	81.960	Petromyzon_marinus
ENSPNAG00000027824	SMARCA5	65	83.696	ENSPMAG00000008026	SMARCA5	100	84.161	Petromyzon_marinus
ENSPNAG00000027824	SMARCA5	97	90.664	ENSPCIG00000003926	SMARCA5	96	88.878	Phascolarctos_cinereus
ENSPNAG00000027824	SMARCA5	97	90.145	ENSPPYG00000015091	SMARCA5	97	88.039	Pongo_abelii
ENSPNAG00000027824	SMARCA5	85	86.500	ENSPCAG00000014230	SMARCA5	83	86.500	Procavia_capensis
ENSPNAG00000027824	SMARCA5	97	87.643	ENSPCOG00000026744	SMARCA5	99	87.198	Propithecus_coquereli
ENSPNAG00000027824	SMARCA5	97	90.353	ENSPVAG00000006482	SMARCA5	97	88.137	Pteropus_vampyrus
ENSPNAG00000027824	SMARCA5	97	90.145	ENSRNOG00000018149	Smarca5	99	89.679	Rattus_norvegicus
ENSPNAG00000027824	SMARCA5	97	90.145	ENSRBIG00000044644	SMARCA5	97	88.149	Rhinopithecus_bieti
ENSPNAG00000027824	SMARCA5	97	90.239	ENSRROG00000029591	SMARCA5	99	89.648	Rhinopithecus_roxellana
ENSPNAG00000027824	SMARCA5	97	90.249	ENSSBOG00000036257	SMARCA5	97	88.039	Saimiri_boliviensis_boliviensis
ENSPNAG00000027824	SMARCA5	97	90.664	ENSSHAG00000008464	SMARCA5	100	90.342	Sarcophilus_harrisii
ENSPNAG00000027824	SMARCA5	100	90.329	ENSSFOG00015013252	SMARCA5	100	90.329	Scleropages_formosus
ENSPNAG00000027824	SMARCA5	97	89.119	ENSSPUG00000007604	SMARCA5	99	89.282	Sphenodon_punctatus
ENSPNAG00000027824	SMARCA5	97	90.456	ENSSSCG00000009047	SMARCA5	96	88.605	Sus_scrofa
ENSPNAG00000027824	SMARCA5	97	91.441	ENSTGUG00000002408	SMARCA5	99	90.462	Taeniopygia_guttata
ENSPNAG00000027824	SMARCA5	97	90.550	ENSUAMG00000023495	SMARCA5	95	88.277	Ursus_americanus
ENSPNAG00000027824	SMARCA5	97	90.456	ENSUMAG00000015324	SMARCA5	96	90.212	Ursus_maritimus
ENSPNAG00000027824	SMARCA5	97	90.456	ENSVPAG00000008982	SMARCA5	97	88.235	Vicugna_pacos
ENSPNAG00000027824	SMARCA5	97	90.550	ENSVVUG00000017473	SMARCA5	97	88.333	Vulpes_vulpes
ENSPNAG00000027824	SMARCA5	92	90.294	ENSXETG00000017566	smarca5	99	85.412	Xenopus_tropicalis