EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000028248 (Gene tree)
Gene ID: 108435487
Gene Symbol: -
Alias: -
Full Name: sal-like protein 3
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 15753 bases
Position: chrKV575471.1:536907-552659
Accession: 108435487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000036981	zf-C2H2	PF00096.26	2.1e-23	1	5
ENSPNAP00000036981	zf-C2H2	PF00096.26	2.1e-23	2	5
ENSPNAP00000036981	zf-C2H2	PF00096.26	2.1e-23	3	5
ENSPNAP00000036981	zf-C2H2	PF00096.26	2.1e-23	4	5
ENSPNAP00000036981	zf-C2H2	PF00096.26	2.1e-23	5	5
ENSPNAP00000036981	zf-met	PF12874.7	2.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000032361	-	6241	XM_017711367	ENSPNAP00000036981	1330 (aa)	XP_017566856	UPI0008143B23

Gene Model

Click here to download ENSPNAG00000028248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000028248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000028248	-	97	65.306	ENSPNAG00000023644	sall1a	99	65.306
ENSPNAG00000028248	-	81	65.306	ENSPNAG00000007442	sall1b	86	65.306
ENSPNAG00000028248	-	100	52.458	ENSPNAG00000017141	sall3b	100	52.018
ENSPNAG00000028248	-	92	39.592	ENSPNAG00000020929	sall4	92	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000028248	-	81	65.306	ENSG00000103449	SALL1	98	63.462	Homo_sapiens
ENSPNAG00000028248	-	100	65.306	ENSAPOG00000022764	sall1a	71	65.306	Acanthochromis_polyacanthus
ENSPNAG00000028248	-	68	65.306	ENSAMEG00000006817	SALL1	98	63.462	Ailuropoda_melanoleuca
ENSPNAG00000028248	-	67	65.385	ENSACIG00000004231	sall1a	69	65.385	Amphilophus_citrinellus
ENSPNAG00000028248	-	100	65.306	ENSAOCG00000002800	sall1a	71	65.306	Amphiprion_ocellaris
ENSPNAG00000028248	-	100	65.306	ENSAPEG00000010179	sall1a	71	65.306	Amphiprion_percula
ENSPNAG00000028248	-	69	65.306	ENSATEG00000003006	sall1a	78	65.306	Anabas_testudineus
ENSPNAG00000028248	-	72	65.306	ENSAPLG00000003356	SALL1	98	65.306	Anas_platyrhynchos
ENSPNAG00000028248	-	97	65.306	ENSACAG00000014399	SALL1	94	65.306	Anolis_carolinensis
ENSPNAG00000028248	-	99	65.306	ENSANAG00000027238	SALL1	98	63.462	Aotus_nancymaae
ENSPNAG00000028248	-	88	65.306	ENSAMXG00000017702	sall1b	93	65.306	Astyanax_mexicanus
ENSPNAG00000028248	-	99	65.306	ENSAMXG00000018599	sall1a	100	65.306	Astyanax_mexicanus
ENSPNAG00000028248	-	68	63.462	ENSBTAG00000008544	SALL1	70	63.462	Bos_taurus
ENSPNAG00000028248	-	99	65.306	ENSCJAG00000001740	SALL1	98	63.462	Callithrix_jacchus
ENSPNAG00000028248	-	93	63.462	ENSCAFG00000009755	SALL1	98	63.462	Canis_familiaris
ENSPNAG00000028248	-	93	63.462	ENSCAFG00020002842	SALL1	98	63.462	Canis_lupus_dingo
ENSPNAG00000028248	-	99	63.462	ENSCHIG00000026074	SALL1	98	63.462	Capra_hircus
ENSPNAG00000028248	-	99	63.462	ENSTSYG00000029464	SALL1	98	63.462	Carlito_syrichta
ENSPNAG00000028248	-	65	65.306	ENSCPOG00000006564	SALL1	98	63.462	Cavia_porcellus
ENSPNAG00000028248	-	99	63.462	ENSCCAG00000001639	SALL1	98	63.462	Cebus_capucinus
ENSPNAG00000028248	-	86	65.306	ENSCATG00000004982	SALL1	98	63.462	Cercocebus_atys
ENSPNAG00000028248	-	68	65.306	ENSCLAG00000006380	SALL1	98	63.462	Chinchilla_lanigera
ENSPNAG00000028248	-	99	65.306	ENSCSAG00000005319	SALL1	98	63.462	Chlorocebus_sabaeus
ENSPNAG00000028248	-	70	63.462	ENSCPBG00000015924	SALL1	99	65.306	Chrysemys_picta_bellii
ENSPNAG00000028248	-	99	65.306	ENSCANG00000036664	SALL1	98	63.462	Colobus_angolensis_palliatus
ENSPNAG00000028248	-	96	68.182	ENSCGRG00001023314	-	98	63.462	Cricetulus_griseus_chok1gshd
ENSPNAG00000028248	-	94	68.182	ENSCGRG00000009496	Sall1	98	63.462	Cricetulus_griseus_crigri
ENSPNAG00000028248	-	81	44.323	ENSCSEG00000009349	sall1a	75	43.744	Cynoglossus_semilaevis
ENSPNAG00000028248	-	53	65.385	ENSDARG00000075891	sall1b	71	65.385	Danio_rerio
ENSPNAG00000028248	-	70	65.306	ENSDARG00000074319	sall1a	78	65.306	Danio_rerio
ENSPNAG00000028248	-	99	63.462	ENSDNOG00000016413	SALL1	98	63.462	Dasypus_novemcinctus
ENSPNAG00000028248	-	96	63.462	ENSETEG00000015150	SALL1	72	63.462	Echinops_telfairi
ENSPNAG00000028248	-	63	38.806	ENSEBUG00000008798	SALL1	62	68.085	Eptatretus_burgeri
ENSPNAG00000028248	-	96	63.462	ENSEEUG00000002014	SALL1	98	63.462	Erinaceus_europaeus
ENSPNAG00000028248	-	69	63.462	ENSFCAG00000024654	SALL1	98	63.462	Felis_catus
ENSPNAG00000028248	-	99	65.306	ENSFALG00000000074	SALL1	71	65.306	Ficedula_albicollis
ENSPNAG00000028248	-	97	65.306	ENSFHEG00000012579	sall1a	69	65.306	Fundulus_heteroclitus
ENSPNAG00000028248	-	95	82.258	ENSFHEG00000008424	-	100	82.258	Fundulus_heteroclitus
ENSPNAG00000028248	-	97	51.670	ENSGMOG00000013383	-	99	51.920	Gadus_morhua
ENSPNAG00000028248	-	72	65.306	ENSGMOG00000006103	sall1a	69	65.306	Gadus_morhua
ENSPNAG00000028248	-	99	65.306	ENSGALG00000039238	SALL1	98	65.306	Gallus_gallus
ENSPNAG00000028248	-	71	65.306	ENSGAFG00000009964	sall1a	69	65.306	Gambusia_affinis
ENSPNAG00000028248	-	71	65.306	ENSGACG00000016702	sall1a	99	65.306	Gasterosteus_aculeatus
ENSPNAG00000028248	-	70	63.462	ENSGAGG00000013979	SALL1	99	63.462	Gopherus_agassizii
ENSPNAG00000028248	-	99	65.306	ENSHGLG00000004288	-	98	63.462	Heterocephalus_glaber_female
ENSPNAG00000028248	-	99	65.306	ENSHGLG00100017496	SALL1	98	63.462	Heterocephalus_glaber_male
ENSPNAG00000028248	-	69	65.306	ENSHCOG00000000974	sall1a	96	65.306	Hippocampus_comes
ENSPNAG00000028248	-	80	63.265	ENSIPUG00000022928	sall1b	84	63.265	Ictalurus_punctatus
ENSPNAG00000028248	-	99	65.306	ENSIPUG00000016265	SALL1	71	65.306	Ictalurus_punctatus
ENSPNAG00000028248	-	99	65.306	ENSSTOG00000020885	SALL1	99	44.452	Ictidomys_tridecemlineatus
ENSPNAG00000028248	-	67	65.306	ENSKMAG00000016681	sall1a	99	65.306	Kryptolebias_marmoratus
ENSPNAG00000028248	-	70	73.684	ENSLBEG00000012207	sall1a	66	73.684	Labrus_bergylta
ENSPNAG00000028248	-	68	63.462	ENSLACG00000003556	SALL1	73	63.462	Latimeria_chalumnae
ENSPNAG00000028248	-	77	61.538	ENSLACG00000014018	-	51	61.538	Latimeria_chalumnae
ENSPNAG00000028248	-	100	46.537	ENSLOCG00000007283	sall1b	100	46.143	Lepisosteus_oculatus
ENSPNAG00000028248	-	86	65.306	ENSLAFG00000015251	SALL1	98	63.462	Loxodonta_africana
ENSPNAG00000028248	-	86	65.306	ENSMFAG00000003298	SALL1	98	63.462	Macaca_fascicularis
ENSPNAG00000028248	-	86	65.306	ENSMMUG00000017200	SALL1	92	63.462	Macaca_mulatta
ENSPNAG00000028248	-	86	65.306	ENSMNEG00000034770	SALL1	92	63.462	Macaca_nemestrina
ENSPNAG00000028248	-	99	65.306	ENSMLEG00000036406	SALL1	98	63.462	Mandrillus_leucophaeus
ENSPNAG00000028248	-	98	65.306	ENSMAMG00000004164	sall1a	99	65.306	Mastacembelus_armatus
ENSPNAG00000028248	-	97	65.306	ENSMGAG00000004704	SALL1	72	65.306	Meleagris_gallopavo
ENSPNAG00000028248	-	96	67.172	ENSMAUG00000019093	Sall1	99	63.462	Mesocricetus_auratus
ENSPNAG00000028248	-	99	63.462	ENSMICG00000036486	SALL1	98	63.462	Microcebus_murinus
ENSPNAG00000028248	-	70	65.306	ENSMMOG00000016400	sall1a	72	65.306	Mola_mola
ENSPNAG00000028248	-	72	65.306	ENSMODG00000013114	SALL1	98	65.306	Monodelphis_domestica
ENSPNAG00000028248	-	71	65.306	ENSMALG00000013400	sall1a	72	65.306	Monopterus_albus
ENSPNAG00000028248	-	99	65.306	MGP_CAROLIEiJ_G0031362	Sall1	98	63.462	Mus_caroli
ENSPNAG00000028248	-	99	65.306	ENSMUSG00000031665	Sall1	98	63.462	Mus_musculus
ENSPNAG00000028248	-	99	65.306	MGP_PahariEiJ_G0022961	Sall1	98	63.462	Mus_pahari
ENSPNAG00000028248	-	99	65.306	MGP_SPRETEiJ_G0032480	Sall1	98	63.462	Mus_spretus
ENSPNAG00000028248	-	97	63.462	ENSMPUG00000003265	SALL1	94	63.462	Mustela_putorius_furo
ENSPNAG00000028248	-	96	63.462	ENSMLUG00000015541	SALL1	99	44.054	Myotis_lucifugus
ENSPNAG00000028248	-	91	56.364	ENSNLEG00000001008	SALL1	99	47.675	Nomascus_leucogenys
ENSPNAG00000028248	-	72	65.306	ENSMEUG00000012206	SALL1	98	65.306	Notamacropus_eugenii
ENSPNAG00000028248	-	70	65.306	ENSOPRG00000005645	SALL1	68	65.306	Ochotona_princeps
ENSPNAG00000028248	-	68	63.462	ENSODEG00000003685	SALL1	98	63.462	Octodon_degus
ENSPNAG00000028248	-	75	72.571	ENSOANG00000013399	SALL1	95	72.973	Ornithorhynchus_anatinus
ENSPNAG00000028248	-	83	65.306	ENSORLG00000013827	sall1a	72	65.306	Oryzias_latipes
ENSPNAG00000028248	-	67	65.306	ENSORLG00020020570	sall1a	72	65.306	Oryzias_latipes_hni
ENSPNAG00000028248	-	84	65.306	ENSORLG00015018830	sall1a	72	65.306	Oryzias_latipes_hsok
ENSPNAG00000028248	-	67	65.306	ENSOMEG00000016043	sall1a	71	65.306	Oryzias_melastigma
ENSPNAG00000028248	-	72	63.462	ENSOGAG00000027316	SALL1	98	63.462	Otolemur_garnettii
ENSPNAG00000028248	-	69	39.630	ENSPPAG00000035136	-	98	36.691	Pan_paniscus
ENSPNAG00000028248	-	69	63.462	ENSPPRG00000023283	SALL1	98	63.462	Panthera_pardus
ENSPNAG00000028248	-	71	72.571	ENSPTIG00000013539	-	84	70.968	Panthera_tigris_altaica
ENSPNAG00000028248	-	67	40.086	ENSPTRG00000045256	-	96	36.922	Pan_troglodytes
ENSPNAG00000028248	-	99	65.306	ENSPANG00000024176	SALL1	98	63.462	Papio_anubis
ENSPNAG00000028248	-	97	65.306	ENSPKIG00000005383	-	99	65.306	Paramormyrops_kingsleyae
ENSPNAG00000028248	-	70	63.462	ENSPSIG00000008582	SALL1	71	63.462	Pelodiscus_sinensis
ENSPNAG00000028248	-	63	65.550	ENSPMGG00000021788	sall1a	98	65.306	Periophthalmus_magnuspinnatus
ENSPNAG00000028248	-	65	71.875	ENSPMAG00000008148	sall1b	98	65.385	Petromyzon_marinus
ENSPNAG00000028248	-	72	65.306	ENSPCIG00000017840	SALL1	98	65.306	Phascolarctos_cinereus
ENSPNAG00000028248	-	73	65.306	ENSPFOG00000015799	sall1a	70	65.306	Poecilia_formosa
ENSPNAG00000028248	-	71	65.306	ENSPLAG00000022539	sall1a	71	65.306	Poecilia_latipinna
ENSPNAG00000028248	-	73	65.306	ENSPMEG00000020894	sall1a	69	65.306	Poecilia_mexicana
ENSPNAG00000028248	-	71	65.306	ENSPREG00000006802	sall1a	70	65.306	Poecilia_reticulata
ENSPNAG00000028248	-	68	65.217	ENSPCAG00000008162	SALL1	90	65.217	Procavia_capensis
ENSPNAG00000028248	-	72	63.462	ENSPCOG00000028192	SALL1	98	63.462	Propithecus_coquereli
ENSPNAG00000028248	-	64	63.462	ENSPVAG00000015374	SALL1	97	63.462	Pteropus_vampyrus
ENSPNAG00000028248	-	99	65.306	ENSRNOG00000013907	Sall1	98	63.462	Rattus_norvegicus
ENSPNAG00000028248	-	86	65.306	ENSRBIG00000015707	SALL1	92	63.462	Rhinopithecus_bieti
ENSPNAG00000028248	-	86	65.306	ENSRROG00000035777	SALL1	97	63.462	Rhinopithecus_roxellana
ENSPNAG00000028248	-	99	65.306	ENSSBOG00000032186	SALL1	98	63.462	Saimiri_boliviensis_boliviensis
ENSPNAG00000028248	-	99	65.306	ENSSHAG00000009477	SALL1	98	65.306	Sarcophilus_harrisii
ENSPNAG00000028248	-	99	65.306	ENSSFOG00015020020	sall1a	99	65.306	Scleropages_formosus
ENSPNAG00000028248	-	98	65.842	ENSSMAG00000009160	sall1a	72	65.306	Scophthalmus_maximus
ENSPNAG00000028248	-	99	66.837	ENSSDUG00000006507	sall1a	58	65.306	Seriola_dumerili
ENSPNAG00000028248	-	59	63.830	ENSSDUG00000000748	sall1b	56	63.830	Seriola_dumerili
ENSPNAG00000028248	-	96	66.837	ENSSLDG00000017721	sall1a	54	65.306	Seriola_lalandi_dorsalis
ENSPNAG00000028248	-	68	63.462	ENSSARG00000000661	SALL1	98	63.462	Sorex_araneus
ENSPNAG00000028248	-	70	65.306	ENSTGUG00000007514	SALL1	98	65.306	Taeniopygia_guttata
ENSPNAG00000028248	-	61	65.306	ENSTRUG00000008950	sall1a	99	65.306	Takifugu_rubripes
ENSPNAG00000028248	-	83	76.415	ENSTNIG00000004257	sall1a	98	65.306	Tetraodon_nigroviridis
ENSPNAG00000028248	-	68	60.784	ENSTBEG00000002119	-	52	60.784	Tupaia_belangeri
ENSPNAG00000028248	-	59	65.957	ENSUAMG00000023379	-	90	65.957	Ursus_americanus
ENSPNAG00000028248	-	68	61.538	ENSXETG00000017176	sall2	53	61.538	Xenopus_tropicalis
ENSPNAG00000028248	-	86	65.306	ENSXMAG00000016273	sall1a	69	65.306	Xiphophorus_maculatus