EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000028307 (Gene tree)
Gene ID: 108430453
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 24920 bases
Position: chrKV575373.1:2147580-2172499
Accession: 108430453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000037000	RTC	PF01137.21	7.2e-57	1	1
ENSPNAP00000037000	RTC_insert	PF05189.13	5e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000040453	-	3378	XM_017702944	ENSPNAP00000037000	406 (aa)	XP_017558433	-

Gene Model

Click here to download ENSPNAG00000028307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000028307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000028307	rcl1	92	78.552	ENSG00000120158	RCL1	96	86.260	Homo_sapiens
ENSPNAG00000028307	rcl1	91	84.783	ENSAPOG00000015666	rcl1	99	84.783	Acanthochromis_polyacanthus
ENSPNAG00000028307	rcl1	92	79.893	ENSAMEG00000002631	RCL1	99	79.893	Ailuropoda_melanoleuca
ENSPNAG00000028307	rcl1	91	82.880	ENSACIG00000021195	rcl1	99	82.880	Amphilophus_citrinellus
ENSPNAG00000028307	rcl1	91	82.880	ENSAOCG00000002223	rcl1	99	82.880	Amphiprion_ocellaris
ENSPNAG00000028307	rcl1	91	83.696	ENSAPEG00000006905	rcl1	99	83.696	Amphiprion_percula
ENSPNAG00000028307	rcl1	91	80.435	ENSATEG00000020026	rcl1	99	80.435	Anabas_testudineus
ENSPNAG00000028307	rcl1	81	77.676	ENSAPLG00000006031	RCL1	99	77.676	Anas_platyrhynchos
ENSPNAG00000028307	rcl1	91	74.394	ENSACAG00000003640	RCL1	99	74.394	Anolis_carolinensis
ENSPNAG00000028307	rcl1	92	78.820	ENSANAG00000037372	RCL1	99	78.820	Aotus_nancymaae
ENSPNAG00000028307	rcl1	91	82.880	ENSACLG00000021724	rcl1	99	82.880	Astatotilapia_calliptera
ENSPNAG00000028307	rcl1	91	90.270	ENSAMXG00000033394	rcl1	100	90.270	Astyanax_mexicanus
ENSPNAG00000028307	rcl1	91	46.277	WBGene00022852	ZK1127.5	99	46.277	Caenorhabditis_elegans
ENSPNAG00000028307	rcl1	92	78.284	ENSCJAG00000011202	RCL1	99	78.284	Callithrix_jacchus
ENSPNAG00000028307	rcl1	92	80.161	ENSCAFG00000002091	RCL1	99	80.161	Canis_familiaris
ENSPNAG00000028307	rcl1	93	79.576	ENSCAFG00020000638	RCL1	79	79.576	Canis_lupus_dingo
ENSPNAG00000028307	rcl1	92	78.016	ENSCHIG00000012407	RCL1	99	78.016	Capra_hircus
ENSPNAG00000028307	rcl1	81	80.183	ENSTSYG00000009592	RCL1	97	83.516	Carlito_syrichta
ENSPNAG00000028307	rcl1	63	64.740	ENSCAPG00000013575	RCL1	100	64.740	Cavia_aperea
ENSPNAG00000028307	rcl1	92	78.552	ENSCPOG00000015354	RCL1	99	78.552	Cavia_porcellus
ENSPNAG00000028307	rcl1	92	78.552	ENSCCAG00000033505	RCL1	97	82.514	Cebus_capucinus
ENSPNAG00000028307	rcl1	91	79.891	ENSCATG00000034721	RCL1	97	82.418	Cercocebus_atys
ENSPNAG00000028307	rcl1	92	77.748	ENSCLAG00000007445	RCL1	99	77.748	Chinchilla_lanigera
ENSPNAG00000028307	rcl1	91	79.620	ENSCSAG00000008811	RCL1	98	79.620	Chlorocebus_sabaeus
ENSPNAG00000028307	rcl1	78	70.347	ENSCHOG00000007216	RCL1	98	70.347	Choloepus_hoffmanni
ENSPNAG00000028307	rcl1	93	75.862	ENSCPBG00000025481	RCL1	94	77.576	Chrysemys_picta_bellii
ENSPNAG00000028307	rcl1	91	58.602	ENSCING00000019565	-	99	58.602	Ciona_intestinalis
ENSPNAG00000028307	rcl1	91	79.620	ENSCANG00000027099	RCL1	98	79.620	Colobus_angolensis_palliatus
ENSPNAG00000028307	rcl1	92	79.357	ENSCGRG00001013748	Rcl1	99	79.357	Cricetulus_griseus_chok1gshd
ENSPNAG00000028307	rcl1	81	80.547	ENSCGRG00000005843	Rcl1	99	80.547	Cricetulus_griseus_crigri
ENSPNAG00000028307	rcl1	92	81.963	ENSCSEG00000000712	rcl1	99	81.963	Cynoglossus_semilaevis
ENSPNAG00000028307	rcl1	91	85.598	ENSCVAG00000011536	rcl1	99	85.598	Cyprinodon_variegatus
ENSPNAG00000028307	rcl1	90	83.924	ENSDARG00000038312	rcl1	100	83.924	Danio_rerio
ENSPNAG00000028307	rcl1	66	80.451	ENSDNOG00000019911	RCL1	100	82.870	Dasypus_novemcinctus
ENSPNAG00000028307	rcl1	91	79.891	ENSDORG00000015645	Rcl1	98	79.891	Dipodomys_ordii
ENSPNAG00000028307	rcl1	90	54.032	FBgn0020909	Rtc1	97	55.376	Drosophila_melanogaster
ENSPNAG00000028307	rcl1	66	95.652	ENSETEG00000014087	-	82	95.652	Echinops_telfairi
ENSPNAG00000028307	rcl1	90	54.918	ENSEBUG00000016621	-	98	54.918	Eptatretus_burgeri
ENSPNAG00000028307	rcl1	92	78.552	ENSEASG00005010653	RCL1	99	78.552	Equus_asinus_asinus
ENSPNAG00000028307	rcl1	92	78.552	ENSECAG00000015973	RCL1	99	78.552	Equus_caballus
ENSPNAG00000028307	rcl1	91	67.663	ENSEEUG00000009801	RCL1	98	67.663	Erinaceus_europaeus
ENSPNAG00000028307	rcl1	91	79.620	ENSELUG00000007353	rcl1	99	79.620	Esox_lucius
ENSPNAG00000028307	rcl1	91	80.163	ENSFCAG00000014557	RCL1	98	80.163	Felis_catus
ENSPNAG00000028307	rcl1	92	70.856	ENSFALG00000010553	RCL1	98	70.856	Ficedula_albicollis
ENSPNAG00000028307	rcl1	81	78.354	ENSFDAG00000004209	RCL1	100	78.354	Fukomys_damarensis
ENSPNAG00000028307	rcl1	91	82.337	ENSFHEG00000011228	rcl1	99	82.337	Fundulus_heteroclitus
ENSPNAG00000028307	rcl1	91	80.707	ENSGMOG00000004677	rcl1	99	80.707	Gadus_morhua
ENSPNAG00000028307	rcl1	90	76.712	ENSGALG00000015024	RCL1	97	76.712	Gallus_gallus
ENSPNAG00000028307	rcl1	91	83.967	ENSGAFG00000007257	rcl1	99	83.967	Gambusia_affinis
ENSPNAG00000028307	rcl1	91	82.337	ENSGACG00000017474	rcl1	99	82.337	Gasterosteus_aculeatus
ENSPNAG00000028307	rcl1	92	76.408	ENSGAGG00000003689	RCL1	99	76.408	Gopherus_agassizii
ENSPNAG00000028307	rcl1	92	78.552	ENSGGOG00000015041	RCL1	97	81.868	Gorilla_gorilla
ENSPNAG00000028307	rcl1	91	83.152	ENSHBUG00000001393	rcl1	99	83.152	Haplochromis_burtoni
ENSPNAG00000028307	rcl1	92	65.684	ENSHGLG00000005368	-	99	65.684	Heterocephalus_glaber_female
ENSPNAG00000028307	rcl1	92	78.016	ENSHGLG00000016452	RCL1	99	78.016	Heterocephalus_glaber_female
ENSPNAG00000028307	rcl1	92	72.386	ENSHGLG00100008718	-	99	72.386	Heterocephalus_glaber_male
ENSPNAG00000028307	rcl1	92	66.220	ENSHGLG00100018010	-	99	66.220	Heterocephalus_glaber_male
ENSPNAG00000028307	rcl1	91	81.522	ENSHCOG00000020170	rcl1	99	81.522	Hippocampus_comes
ENSPNAG00000028307	rcl1	91	88.649	ENSIPUG00000018054	RCL1	100	88.649	Ictalurus_punctatus
ENSPNAG00000028307	rcl1	92	78.820	ENSSTOG00000000023	RCL1	99	78.820	Ictidomys_tridecemlineatus
ENSPNAG00000028307	rcl1	92	79.357	ENSJJAG00000022803	-	99	79.357	Jaculus_jaculus
ENSPNAG00000028307	rcl1	50	61.881	ENSJJAG00000000764	-	98	61.881	Jaculus_jaculus
ENSPNAG00000028307	rcl1	91	71.467	ENSJJAG00000015632	-	98	71.467	Jaculus_jaculus
ENSPNAG00000028307	rcl1	91	81.030	ENSKMAG00000011946	rcl1	99	81.030	Kryptolebias_marmoratus
ENSPNAG00000028307	rcl1	91	78.261	ENSLBEG00000003957	rcl1	99	78.261	Labrus_bergylta
ENSPNAG00000028307	rcl1	79	78.370	ENSLACG00000004594	RCL1	99	78.370	Latimeria_chalumnae
ENSPNAG00000028307	rcl1	92	84.309	ENSLOCG00000010148	rcl1	99	84.309	Lepisosteus_oculatus
ENSPNAG00000028307	rcl1	91	78.261	ENSLAFG00000017495	RCL1	98	78.261	Loxodonta_africana
ENSPNAG00000028307	rcl1	91	79.620	ENSMFAG00000037906	RCL1	98	79.620	Macaca_fascicularis
ENSPNAG00000028307	rcl1	91	79.620	ENSMNEG00000012288	RCL1	97	82.418	Macaca_nemestrina
ENSPNAG00000028307	rcl1	91	79.620	ENSMLEG00000043088	RCL1	98	79.620	Mandrillus_leucophaeus
ENSPNAG00000028307	rcl1	91	82.880	ENSMAMG00000008311	rcl1	99	82.880	Mastacembelus_armatus
ENSPNAG00000028307	rcl1	91	82.880	ENSMZEG00005017292	rcl1	99	82.880	Maylandia_zebra
ENSPNAG00000028307	rcl1	53	77.064	ENSMGAG00000002245	RCL1	99	77.064	Meleagris_gallopavo
ENSPNAG00000028307	rcl1	53	81.944	ENSMAUG00000008922	Rcl1	100	81.944	Mesocricetus_auratus
ENSPNAG00000028307	rcl1	91	79.891	ENSMICG00000015562	RCL1	98	79.891	Microcebus_murinus
ENSPNAG00000028307	rcl1	92	78.820	ENSMOCG00000012145	Rcl1	99	78.820	Microtus_ochrogaster
ENSPNAG00000028307	rcl1	91	79.133	ENSMMOG00000021264	rcl1	99	79.133	Mola_mola
ENSPNAG00000028307	rcl1	87	76.338	ENSMODG00000015377	RCL1	94	76.338	Monodelphis_domestica
ENSPNAG00000028307	rcl1	91	81.250	ENSMALG00000018618	rcl1	99	81.250	Monopterus_albus
ENSPNAG00000028307	rcl1	92	78.820	MGP_CAROLIEiJ_G0022853	Rcl1	99	78.820	Mus_caroli
ENSPNAG00000028307	rcl1	92	78.820	ENSMUSG00000024785	Rcl1	99	78.820	Mus_musculus
ENSPNAG00000028307	rcl1	92	79.893	MGP_PahariEiJ_G0014346	Rcl1	100	83.041	Mus_pahari
ENSPNAG00000028307	rcl1	92	78.552	MGP_SPRETEiJ_G0023771	Rcl1	100	82.456	Mus_spretus
ENSPNAG00000028307	rcl1	92	79.088	ENSMPUG00000004998	RCL1	99	79.088	Mustela_putorius_furo
ENSPNAG00000028307	rcl1	92	78.016	ENSMLUG00000009654	RCL1	99	78.016	Myotis_lucifugus
ENSPNAG00000028307	rcl1	92	79.088	ENSNGAG00000015327	Rcl1	99	79.088	Nannospalax_galili
ENSPNAG00000028307	rcl1	83	79.525	ENSNBRG00000019854	rcl1	99	75.691	Neolamprologus_brichardi
ENSPNAG00000028307	rcl1	92	75.603	ENSNLEG00000008891	RCL1	99	75.603	Nomascus_leucogenys
ENSPNAG00000028307	rcl1	92	70.241	ENSMEUG00000007653	RCL1	99	70.241	Notamacropus_eugenii
ENSPNAG00000028307	rcl1	92	78.820	ENSOPRG00000010965	RCL1	99	78.820	Ochotona_princeps
ENSPNAG00000028307	rcl1	81	67.665	ENSODEG00000004151	RCL1	96	67.665	Octodon_degus
ENSPNAG00000028307	rcl1	91	83.152	ENSONIG00000003871	rcl1	99	83.152	Oreochromis_niloticus
ENSPNAG00000028307	rcl1	62	75.494	ENSOANG00000013193	-	99	75.494	Ornithorhynchus_anatinus
ENSPNAG00000028307	rcl1	92	78.552	ENSOCUG00000008161	RCL1	99	78.552	Oryctolagus_cuniculus
ENSPNAG00000028307	rcl1	91	80.978	ENSORLG00000010443	rcl1	99	80.978	Oryzias_latipes
ENSPNAG00000028307	rcl1	91	81.250	ENSORLG00020012211	rcl1	99	81.250	Oryzias_latipes_hni
ENSPNAG00000028307	rcl1	91	80.707	ENSORLG00015001122	rcl1	99	80.707	Oryzias_latipes_hsok
ENSPNAG00000028307	rcl1	99	76.699	ENSOMEG00000022976	rcl1	97	76.699	Oryzias_melastigma
ENSPNAG00000028307	rcl1	92	78.284	ENSOGAG00000007480	RCL1	99	78.284	Otolemur_garnettii
ENSPNAG00000028307	rcl1	92	78.016	ENSOARG00000013463	RCL1	99	78.016	Ovis_aries
ENSPNAG00000028307	rcl1	92	78.284	ENSPPAG00000037958	RCL1	99	78.284	Pan_paniscus
ENSPNAG00000028307	rcl1	91	79.348	ENSPPRG00000022645	RCL1	96	82.682	Panthera_pardus
ENSPNAG00000028307	rcl1	81	80.122	ENSPTIG00000019031	RCL1	100	81.944	Panthera_tigris_altaica
ENSPNAG00000028307	rcl1	92	78.016	ENSPTRG00000020743	RCL1	97	82.418	Pan_troglodytes
ENSPNAG00000028307	rcl1	91	79.620	ENSPANG00000025151	RCL1	98	79.620	Papio_anubis
ENSPNAG00000028307	rcl1	91	79.891	ENSPKIG00000021022	rcl1	99	79.891	Paramormyrops_kingsleyae
ENSPNAG00000028307	rcl1	81	77.508	ENSPSIG00000012302	RCL1	100	77.508	Pelodiscus_sinensis
ENSPNAG00000028307	rcl1	91	83.152	ENSPMGG00000024007	rcl1	99	83.152	Periophthalmus_magnuspinnatus
ENSPNAG00000028307	rcl1	92	79.088	ENSPEMG00000023275	Rcl1	99	79.088	Peromyscus_maniculatus_bairdii
ENSPNAG00000028307	rcl1	92	76.408	ENSPCIG00000000188	RCL1	99	76.408	Phascolarctos_cinereus
ENSPNAG00000028307	rcl1	92	82.133	ENSPFOG00000019682	rcl1	100	82.133	Poecilia_formosa
ENSPNAG00000028307	rcl1	91	83.152	ENSPLAG00000022354	rcl1	99	83.152	Poecilia_latipinna
ENSPNAG00000028307	rcl1	91	83.152	ENSPMEG00000008131	rcl1	99	83.152	Poecilia_mexicana
ENSPNAG00000028307	rcl1	91	82.609	ENSPREG00000008032	rcl1	99	82.609	Poecilia_reticulata
ENSPNAG00000028307	rcl1	92	78.284	ENSPPYG00000019244	RCL1	99	78.284	Pongo_abelii
ENSPNAG00000028307	rcl1	91	73.098	ENSPCAG00000001440	RCL1	98	73.098	Procavia_capensis
ENSPNAG00000028307	rcl1	92	78.820	ENSPCOG00000009611	RCL1	97	82.967	Propithecus_coquereli
ENSPNAG00000028307	rcl1	92	78.552	ENSPVAG00000015752	RCL1	99	78.552	Pteropus_vampyrus
ENSPNAG00000028307	rcl1	91	82.609	ENSPNYG00000012910	rcl1	99	82.609	Pundamilia_nyererei
ENSPNAG00000028307	rcl1	92	78.016	ENSRNOG00000015491	Rcl1	99	78.016	Rattus_norvegicus
ENSPNAG00000028307	rcl1	91	79.348	ENSRBIG00000035818	RCL1	98	79.348	Rhinopithecus_bieti
ENSPNAG00000028307	rcl1	91	79.620	ENSRROG00000029781	RCL1	97	82.418	Rhinopithecus_roxellana
ENSPNAG00000028307	rcl1	91	37.731	YOL010W	-	99	37.731	Saccharomyces_cerevisiae
ENSPNAG00000028307	rcl1	92	78.552	ENSSBOG00000026369	RCL1	97	82.514	Saimiri_boliviensis_boliviensis
ENSPNAG00000028307	rcl1	82	78.248	ENSSHAG00000014086	RCL1	100	78.248	Sarcophilus_harrisii
ENSPNAG00000028307	rcl1	91	80.163	ENSSFOG00015023020	rcl1	99	80.163	Scleropages_formosus
ENSPNAG00000028307	rcl1	92	82.181	ENSSMAG00000019751	rcl1	87	82.181	Scophthalmus_maximus
ENSPNAG00000028307	rcl1	91	82.337	ENSSDUG00000006349	rcl1	99	82.337	Seriola_dumerili
ENSPNAG00000028307	rcl1	91	82.880	ENSSLDG00000022076	rcl1	99	82.880	Seriola_lalandi_dorsalis
ENSPNAG00000028307	rcl1	92	78.552	ENSSARG00000009260	RCL1	99	78.552	Sorex_araneus
ENSPNAG00000028307	rcl1	91	77.717	ENSSPUG00000016330	RCL1	98	77.717	Sphenodon_punctatus
ENSPNAG00000028307	rcl1	91	83.424	ENSSPAG00000018038	rcl1	99	83.424	Stegastes_partitus
ENSPNAG00000028307	rcl1	96	75.188	ENSSSCG00000005217	RCL1	88	75.188	Sus_scrofa
ENSPNAG00000028307	rcl1	90	75.815	ENSTGUG00000005138	RCL1	98	75.815	Taeniopygia_guttata
ENSPNAG00000028307	rcl1	91	81.793	ENSTRUG00000010493	rcl1	99	81.793	Takifugu_rubripes
ENSPNAG00000028307	rcl1	91	80.707	ENSTNIG00000013214	rcl1	98	80.707	Tetraodon_nigroviridis
ENSPNAG00000028307	rcl1	92	73.727	ENSTBEG00000016339	RCL1	99	73.727	Tupaia_belangeri
ENSPNAG00000028307	rcl1	92	77.748	ENSTTRG00000016525	RCL1	99	77.748	Tursiops_truncatus
ENSPNAG00000028307	rcl1	92	79.893	ENSUAMG00000005598	RCL1	99	81.115	Ursus_americanus
ENSPNAG00000028307	rcl1	81	80.488	ENSUMAG00000017890	RCL1	97	80.488	Ursus_maritimus
ENSPNAG00000028307	rcl1	81	80.183	ENSVPAG00000009188	RCL1	100	80.183	Vicugna_pacos
ENSPNAG00000028307	rcl1	81	81.763	ENSVVUG00000007304	RCL1	89	81.763	Vulpes_vulpes
ENSPNAG00000028307	rcl1	92	68.449	ENSXETG00000000592	rcl1	99	68.449	Xenopus_tropicalis
ENSPNAG00000028307	rcl1	91	83.424	ENSXCOG00000004922	rcl1	99	83.424	Xiphophorus_couchianus
ENSPNAG00000028307	rcl1	91	83.424	ENSXMAG00000022366	RCL1	99	83.424	Xiphophorus_maculatus