EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000028332 (Gene tree)
Gene ID: 108429900
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 42241 bases
Position: chrKV575365.1:2699730-2741970
Accession: 108429900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000036975	HARE-HTH	PF05066.13	1.3e-15	1	1
ENSPNAP00000021250	HARE-HTH	PF05066.13	1.5e-15	1	1
ENSPNAP00000036989	HARE-HTH	PF05066.13	4.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000032377	-	2327	XM_017701973	ENSPNAP00000021250	544 (aa)	XP_017557462	UPI000814377F
ENSPNAT00000032349	-	1491	-	ENSPNAP00000036975	496 (aa)	-	-
ENSPNAT00000040462	-	2264	XM_017701975	ENSPNAP00000036989	523 (aa)	XP_017557464	UPI000814719A

Gene Model

Click here to download ENSPNAG00000028332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000028332's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000028332	tbrg1	99	71.316	ENSAPOG00000017352	tbrg1	99	70.163	Acanthochromis_polyacanthus
ENSPNAG00000028332	tbrg1	95	71.340	ENSACIG00000021274	tbrg1	94	71.315	Amphilophus_citrinellus
ENSPNAG00000028332	tbrg1	99	71.316	ENSAOCG00000018605	tbrg1	99	70.163	Amphiprion_ocellaris
ENSPNAG00000028332	tbrg1	99	71.316	ENSAPEG00000022443	tbrg1	99	70.163	Amphiprion_percula
ENSPNAG00000028332	tbrg1	99	71.287	ENSATEG00000023537	tbrg1	98	70.330	Anabas_testudineus
ENSPNAG00000028332	tbrg1	99	71.683	ENSACLG00000000281	tbrg1	99	69.581	Astatotilapia_calliptera
ENSPNAG00000028332	tbrg1	100	84.954	ENSAMXG00000008381	tbrg1	100	84.954	Astyanax_mexicanus
ENSPNAG00000028332	tbrg1	99	71.168	ENSCSEG00000002445	tbrg1	99	71.898	Cynoglossus_semilaevis
ENSPNAG00000028332	tbrg1	96	68.750	ENSCVAG00000019626	tbrg1	98	68.275	Cyprinodon_variegatus
ENSPNAG00000028332	tbrg1	100	73.626	ENSDARG00000074996	tbrg1	100	73.810	Danio_rerio
ENSPNAG00000028332	tbrg1	91	50.638	ENSEBUG00000014060	tbrg1	90	48.941	Eptatretus_burgeri
ENSPNAG00000028332	tbrg1	99	72.167	ENSELUG00000017458	tbrg1	99	70.417	Esox_lucius
ENSPNAG00000028332	tbrg1	94	64.155	ENSFHEG00000004283	tbrg1	92	65.971	Fundulus_heteroclitus
ENSPNAG00000028332	tbrg1	98	68.515	ENSGAFG00000000204	tbrg1	98	68.190	Gambusia_affinis
ENSPNAG00000028332	tbrg1	99	71.683	ENSHBUG00000004935	tbrg1	99	69.581	Haplochromis_burtoni
ENSPNAG00000028332	tbrg1	93	67.409	ENSHCOG00000010588	tbrg1	93	67.686	Hippocampus_comes
ENSPNAG00000028332	tbrg1	99	81.400	ENSIPUG00000008697	tbrg1	99	81.215	Ictalurus_punctatus
ENSPNAG00000028332	tbrg1	99	68.452	ENSKMAG00000002775	tbrg1	99	68.364	Kryptolebias_marmoratus
ENSPNAG00000028332	tbrg1	99	70.553	ENSLBEG00000017559	tbrg1	97	69.275	Labrus_bergylta
ENSPNAG00000028332	tbrg1	99	74.954	ENSLOCG00000003093	tbrg1	98	74.589	Lepisosteus_oculatus
ENSPNAG00000028332	tbrg1	99	72.277	ENSMAMG00000000876	tbrg1	98	71.612	Mastacembelus_armatus
ENSPNAG00000028332	tbrg1	99	71.683	ENSMZEG00005013545	tbrg1	91	69.581	Maylandia_zebra
ENSPNAG00000028332	tbrg1	96	68.098	ENSMMOG00000005314	tbrg1	95	68.015	Mola_mola
ENSPNAG00000028332	tbrg1	95	74.021	ENSMALG00000011630	tbrg1	99	73.010	Monopterus_albus
ENSPNAG00000028332	tbrg1	98	72.000	ENSNBRG00000017490	tbrg1	99	69.403	Neolamprologus_brichardi
ENSPNAG00000028332	tbrg1	99	71.485	ENSONIG00000005284	tbrg1	99	69.945	Oreochromis_niloticus
ENSPNAG00000028332	tbrg1	99	69.109	ENSORLG00000014519	tbrg1	98	69.231	Oryzias_latipes
ENSPNAG00000028332	tbrg1	99	68.317	ENSORLG00020009567	tbrg1	98	68.681	Oryzias_latipes_hni
ENSPNAG00000028332	tbrg1	99	68.911	ENSORLG00015000448	tbrg1	98	68.864	Oryzias_latipes_hsok
ENSPNAG00000028332	tbrg1	99	69.231	ENSOMEG00000006130	tbrg1	98	69.414	Oryzias_melastigma
ENSPNAG00000028332	tbrg1	97	74.134	ENSPKIG00000012274	tbrg1	92	72.744	Paramormyrops_kingsleyae
ENSPNAG00000028332	tbrg1	93	73.019	ENSPMGG00000015968	tbrg1	91	73.239	Periophthalmus_magnuspinnatus
ENSPNAG00000028332	tbrg1	96	70.528	ENSPFOG00000004279	tbrg1	97	68.807	Poecilia_formosa
ENSPNAG00000028332	tbrg1	96	70.325	ENSPLAG00000001227	tbrg1	97	70.117	Poecilia_latipinna
ENSPNAG00000028332	tbrg1	96	70.303	ENSPMEG00000000955	tbrg1	97	68.807	Poecilia_mexicana
ENSPNAG00000028332	tbrg1	96	69.919	ENSPREG00000005246	tbrg1	97	67.695	Poecilia_reticulata
ENSPNAG00000028332	tbrg1	90	71.336	ENSPNYG00000012625	tbrg1	99	68.619	Pundamilia_nyererei
ENSPNAG00000028332	tbrg1	95	76.200	ENSSFOG00015009308	tbrg1	99	70.172	Scleropages_formosus
ENSPNAG00000028332	tbrg1	99	71.657	ENSSMAG00000002529	tbrg1	100	72.190	Scophthalmus_maximus
ENSPNAG00000028332	tbrg1	99	71.881	ENSSDUG00000013674	tbrg1	98	71.429	Seriola_dumerili
ENSPNAG00000028332	tbrg1	96	72.379	ENSSLDG00000008932	tbrg1	98	73.099	Seriola_lalandi_dorsalis
ENSPNAG00000028332	tbrg1	86	73.767	ENSSPAG00000004808	tbrg1	99	72.689	Stegastes_partitus
ENSPNAG00000028332	tbrg1	96	69.043	ENSTRUG00000005960	tbrg1	98	69.112	Takifugu_rubripes
ENSPNAG00000028332	tbrg1	98	68.836	ENSXMAG00000001551	tbrg1	98	68.007	Xiphophorus_maculatus