EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000028365 (Gene tree)
Gene ID: 108430451
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 15956 bases
Position: chrKV575373.1:2100668-2116623
Accession: 108430451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000037038	YTH	PF04146.15	1.5e-41	1	1
ENSPNAP00000037052	YTH	PF04146.15	1.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000040484	-	4257	XM_017702941	ENSPNAP00000037038	687 (aa)	XP_017558430	UPI000814260F
ENSPNAT00000040495	-	4347	XM_017702940	ENSPNAP00000037052	717 (aa)	XP_017558429	UPI0008142761

Gene Model

Click here to download ENSPNAG00000028365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000028365's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000028365	ythdc1	93	69.609	ENSG00000083896	YTHDC1	85	82.500	Homo_sapiens
ENSPNAG00000028365	ythdc1	57	67.005	ENSAPOG00000013997	ythdc1	56	70.558	Acanthochromis_polyacanthus
ENSPNAG00000028365	ythdc1	93	69.164	ENSAMEG00000005688	YTHDC1	93	69.075	Ailuropoda_melanoleuca
ENSPNAG00000028365	ythdc1	92	60.213	ENSAOCG00000000239	ythdc1	94	64.634	Amphiprion_ocellaris
ENSPNAG00000028365	ythdc1	83	62.779	ENSAPEG00000000618	ythdc1	90	65.085	Amphiprion_percula
ENSPNAG00000028365	ythdc1	83	64.138	ENSATEG00000023007	ythdc1	96	63.740	Anabas_testudineus
ENSPNAG00000028365	ythdc1	91	69.670	ENSAPLG00000009921	YTHDC1	92	70.420	Anas_platyrhynchos
ENSPNAG00000028365	ythdc1	93	69.129	ENSACAG00000009697	YTHDC1	93	68.095	Anolis_carolinensis
ENSPNAG00000028365	ythdc1	93	69.509	ENSANAG00000001522	YTHDC1	93	69.420	Aotus_nancymaae
ENSPNAG00000028365	ythdc1	92	60.241	ENSACLG00000019371	ythdc1	94	64.939	Astatotilapia_calliptera
ENSPNAG00000028365	ythdc1	100	96.070	ENSAMXG00000006978	ythdc1	92	94.953	Astyanax_mexicanus
ENSPNAG00000028365	ythdc1	93	68.497	ENSBTAG00000015572	YTHDC1	93	68.406	Bos_taurus
ENSPNAG00000028365	ythdc1	93	69.509	ENSCJAG00000009934	YTHDC1	93	69.420	Callithrix_jacchus
ENSPNAG00000028365	ythdc1	93	69.164	ENSCAFG00000002821	YTHDC1	93	69.075	Canis_familiaris
ENSPNAG00000028365	ythdc1	93	69.164	ENSCAFG00020027112	YTHDC1	93	69.075	Canis_lupus_dingo
ENSPNAG00000028365	ythdc1	91	61.505	ENSCHIG00000004810	YTHDC1	95	68.130	Capra_hircus
ENSPNAG00000028365	ythdc1	93	69.465	ENSTSYG00000011668	YTHDC1	93	69.956	Carlito_syrichta
ENSPNAG00000028365	ythdc1	90	48.769	ENSCAPG00000008722	YTHDC1	89	49.231	Cavia_aperea
ENSPNAG00000028365	ythdc1	93	63.728	ENSCPOG00000010929	YTHDC1	92	63.768	Cavia_porcellus
ENSPNAG00000028365	ythdc1	93	69.710	ENSCCAG00000035754	YTHDC1	93	69.622	Cebus_capucinus
ENSPNAG00000028365	ythdc1	93	68.714	ENSCATG00000036320	YTHDC1	97	68.311	Cercocebus_atys
ENSPNAG00000028365	ythdc1	91	68.605	ENSCLAG00000005482	YTHDC1	92	69.141	Chinchilla_lanigera
ENSPNAG00000028365	ythdc1	93	69.653	ENSCSAG00000005252	YTHDC1	93	69.565	Chlorocebus_sabaeus
ENSPNAG00000028365	ythdc1	93	69.310	ENSCPBG00000021965	YTHDC1	98	69.809	Chrysemys_picta_bellii
ENSPNAG00000028365	ythdc1	93	69.509	ENSCANG00000004769	YTHDC1	96	68.121	Colobus_angolensis_palliatus
ENSPNAG00000028365	ythdc1	93	68.383	ENSCGRG00001000816	Ythdc1	93	69.010	Cricetulus_griseus_chok1gshd
ENSPNAG00000028365	ythdc1	91	69.355	ENSCGRG00000009807	Ythdc1	92	70.000	Cricetulus_griseus_crigri
ENSPNAG00000028365	ythdc1	92	59.941	ENSCSEG00000020404	ythdc1	94	63.830	Cynoglossus_semilaevis
ENSPNAG00000028365	ythdc1	58	69.014	ENSCVAG00000022349	ythdc1	94	62.443	Cyprinodon_variegatus
ENSPNAG00000028365	ythdc1	92	84.858	ENSDARG00000051953	ythdc1	92	84.069	Danio_rerio
ENSPNAG00000028365	ythdc1	93	70.408	ENSDNOG00000004949	YTHDC1	93	70.029	Dasypus_novemcinctus
ENSPNAG00000028365	ythdc1	91	69.208	ENSDORG00000013045	Ythdc1	92	68.613	Dipodomys_ordii
ENSPNAG00000028365	ythdc1	72	92.958	ENSETEG00000001878	YTHDC1	69	88.608	Echinops_telfairi
ENSPNAG00000028365	ythdc1	93	69.164	ENSEASG00005018383	YTHDC1	93	69.075	Equus_asinus_asinus
ENSPNAG00000028365	ythdc1	91	84.987	ENSECAG00000018303	YTHDC1	99	66.851	Equus_caballus
ENSPNAG00000028365	ythdc1	60	84.687	ENSEEUG00000015466	YTHDC1	93	68.406	Erinaceus_europaeus
ENSPNAG00000028365	ythdc1	92	77.912	ENSELUG00000014029	ythdc1	96	79.095	Esox_lucius
ENSPNAG00000028365	ythdc1	93	69.264	ENSFCAG00000026791	YTHDC1	93	69.175	Felis_catus
ENSPNAG00000028365	ythdc1	70	81.179	ENSFALG00000006581	YTHDC1	87	82.697	Ficedula_albicollis
ENSPNAG00000028365	ythdc1	91	69.956	ENSFDAG00000018560	YTHDC1	92	70.015	Fukomys_damarensis
ENSPNAG00000028365	ythdc1	69	63.380	ENSFHEG00000001286	ythdc1	62	58.112	Fundulus_heteroclitus
ENSPNAG00000028365	ythdc1	71	65.157	ENSGMOG00000018815	ythdc1	56	76.000	Gadus_morhua
ENSPNAG00000028365	ythdc1	91	70.571	ENSGALG00000035906	YTHDC1	88	67.375	Gallus_gallus
ENSPNAG00000028365	ythdc1	100	56.091	ENSGACG00000015486	ythdc1	94	56.714	Gasterosteus_aculeatus
ENSPNAG00000028365	ythdc1	92	68.944	ENSGAGG00000007108	YTHDC1	92	68.478	Gopherus_agassizii
ENSPNAG00000028365	ythdc1	93	68.714	ENSGGOG00000021958	YTHDC1	97	68.182	Gorilla_gorilla
ENSPNAG00000028365	ythdc1	92	60.542	ENSHBUG00000019288	ythdc1	93	64.939	Haplochromis_burtoni
ENSPNAG00000028365	ythdc1	93	69.209	ENSHGLG00000006319	-	93	69.120	Heterocephalus_glaber_female
ENSPNAG00000028365	ythdc1	94	57.016	ENSHGLG00000003239	-	86	56.515	Heterocephalus_glaber_female
ENSPNAG00000028365	ythdc1	94	55.588	ENSHGLG00100008060	-	86	55.053	Heterocephalus_glaber_male
ENSPNAG00000028365	ythdc1	93	69.175	ENSHGLG00100001556	-	93	69.086	Heterocephalus_glaber_male
ENSPNAG00000028365	ythdc1	56	74.468	ENSHCOG00000001520	ythdc1	79	74.468	Hippocampus_comes
ENSPNAG00000028365	ythdc1	93	87.519	ENSIPUG00000018136	ythdc1	92	87.218	Ictalurus_punctatus
ENSPNAG00000028365	ythdc1	60	83.599	ENSSTOG00000013652	YTHDC1	93	67.330	Ictidomys_tridecemlineatus
ENSPNAG00000028365	ythdc1	60	82.916	ENSJJAG00000010268	Ythdc1	93	67.742	Jaculus_jaculus
ENSPNAG00000028365	ythdc1	57	68.204	ENSKMAG00000006483	ythdc1	86	73.621	Kryptolebias_marmoratus
ENSPNAG00000028365	ythdc1	65	81.818	ENSLBEG00000020831	ythdc1	72	81.818	Labrus_bergylta
ENSPNAG00000028365	ythdc1	87	69.003	ENSLACG00000004893	YTHDC1	92	69.207	Latimeria_chalumnae
ENSPNAG00000028365	ythdc1	93	78.038	ENSLOCG00000003045	ythdc1	92	75.111	Lepisosteus_oculatus
ENSPNAG00000028365	ythdc1	93	69.597	ENSLAFG00000021592	YTHDC1	100	65.563	Loxodonta_africana
ENSPNAG00000028365	ythdc1	93	68.714	ENSMFAG00000031927	YTHDC1	96	68.121	Macaca_fascicularis
ENSPNAG00000028365	ythdc1	93	69.509	ENSMMUG00000002265	YTHDC1	93	69.420	Macaca_mulatta
ENSPNAG00000028365	ythdc1	93	69.509	ENSMNEG00000033751	YTHDC1	96	68.121	Macaca_nemestrina
ENSPNAG00000028365	ythdc1	93	69.509	ENSMLEG00000042147	YTHDC1	96	68.121	Mandrillus_leucophaeus
ENSPNAG00000028365	ythdc1	57	69.853	ENSMAMG00000013122	ythdc1	92	61.848	Mastacembelus_armatus
ENSPNAG00000028365	ythdc1	92	60.241	ENSMZEG00005023173	ythdc1	93	64.939	Maylandia_zebra
ENSPNAG00000028365	ythdc1	93	69.822	ENSMGAG00000010391	YTHDC1	92	69.527	Meleagris_gallopavo
ENSPNAG00000028365	ythdc1	93	68.383	ENSMAUG00000001286	Ythdc1	93	69.154	Mesocricetus_auratus
ENSPNAG00000028365	ythdc1	93	69.440	ENSMICG00000034640	YTHDC1	93	69.353	Microcebus_murinus
ENSPNAG00000028365	ythdc1	93	68.391	ENSMOCG00000020201	Ythdc1	93	68.444	Microtus_ochrogaster
ENSPNAG00000028365	ythdc1	67	54.071	ENSMODG00000009173	-	88	56.840	Monodelphis_domestica
ENSPNAG00000028365	ythdc1	93	70.746	ENSMODG00000020754	-	92	70.387	Monodelphis_domestica
ENSPNAG00000028365	ythdc1	51	57.020	ENSMODG00000004117	-	92	58.514	Monodelphis_domestica
ENSPNAG00000028365	ythdc1	96	44.413	ENSMODG00000010076	-	59	57.518	Monodelphis_domestica
ENSPNAG00000028365	ythdc1	92	62.115	ENSMODG00000014337	-	92	62.676	Monodelphis_domestica
ENSPNAG00000028365	ythdc1	83	63.776	ENSMALG00000013412	ythdc1	94	63.559	Monopterus_albus
ENSPNAG00000028365	ythdc1	93	68.307	MGP_CAROLIEiJ_G0027347	Ythdc1	93	68.360	Mus_caroli
ENSPNAG00000028365	ythdc1	93	68.786	ENSMUSG00000035851	Ythdc1	93	68.551	Mus_musculus
ENSPNAG00000028365	ythdc1	93	69.075	MGP_PahariEiJ_G0017126	Ythdc1	93	68.841	Mus_pahari
ENSPNAG00000028365	ythdc1	93	68.931	MGP_SPRETEiJ_G0028339	Ythdc1	93	68.696	Mus_spretus
ENSPNAG00000028365	ythdc1	93	59.942	ENSMPUG00000001743	YTHDC1	66	86.260	Mustela_putorius_furo
ENSPNAG00000028365	ythdc1	91	70.206	ENSMLUG00000016300	YTHDC1	92	70.562	Myotis_lucifugus
ENSPNAG00000028365	ythdc1	59	60.538	ENSNGAG00000024000	Ythdc1	93	59.551	Nannospalax_galili
ENSPNAG00000028365	ythdc1	58	67.076	ENSNBRG00000007663	ythdc1	71	72.973	Neolamprologus_brichardi
ENSPNAG00000028365	ythdc1	91	68.116	ENSNLEG00000009202	YTHDC1	96	67.681	Nomascus_leucogenys
ENSPNAG00000028365	ythdc1	68	71.197	ENSMEUG00000007128	YTHDC1	65	71.197	Notamacropus_eugenii
ENSPNAG00000028365	ythdc1	70	85.256	ENSOPRG00000008986	YTHDC1	66	85.113	Ochotona_princeps
ENSPNAG00000028365	ythdc1	93	69.287	ENSODEG00000001715	YTHDC1	93	69.635	Octodon_degus
ENSPNAG00000028365	ythdc1	92	81.818	ENSONIG00000012651	ythdc1	90	80.000	Oreochromis_niloticus
ENSPNAG00000028365	ythdc1	87	61.689	ENSOANG00000014398	YTHDC1	55	83.704	Ornithorhynchus_anatinus
ENSPNAG00000028365	ythdc1	93	62.463	ENSOCUG00000015886	YTHDC1	55	84.712	Oryctolagus_cuniculus
ENSPNAG00000028365	ythdc1	92	59.969	ENSORLG00000030544	ythdc1	94	63.804	Oryzias_latipes
ENSPNAG00000028365	ythdc1	92	59.969	ENSORLG00020019316	ythdc1	94	64.110	Oryzias_latipes_hni
ENSPNAG00000028365	ythdc1	92	59.726	ENSOMEG00000000551	ythdc1	94	62.423	Oryzias_melastigma
ENSPNAG00000028365	ythdc1	93	70.000	ENSOGAG00000003362	YTHDC1	93	70.058	Otolemur_garnettii
ENSPNAG00000028365	ythdc1	93	68.497	ENSOARG00000008633	YTHDC1	93	68.406	Ovis_aries
ENSPNAG00000028365	ythdc1	93	68.813	ENSPPAG00000041315	YTHDC1	97	68.880	Pan_paniscus
ENSPNAG00000028365	ythdc1	93	68.474	ENSPPRG00000011979	YTHDC1	93	68.383	Panthera_pardus
ENSPNAG00000028365	ythdc1	91	68.307	ENSPTIG00000015527	YTHDC1	93	68.215	Panthera_tigris_altaica
ENSPNAG00000028365	ythdc1	93	68.813	ENSPTRG00000016105	YTHDC1	97	68.880	Pan_troglodytes
ENSPNAG00000028365	ythdc1	93	68.714	ENSPANG00000021590	YTHDC1	96	68.113	Papio_anubis
ENSPNAG00000028365	ythdc1	93	80.149	ENSPKIG00000018497	ythdc1	93	80.746	Paramormyrops_kingsleyae
ENSPNAG00000028365	ythdc1	91	69.715	ENSPSIG00000002782	YTHDC1	92	69.265	Pelodiscus_sinensis
ENSPNAG00000028365	ythdc1	57	63.415	ENSPMGG00000000970	-	77	64.939	Periophthalmus_magnuspinnatus
ENSPNAG00000028365	ythdc1	91	69.208	ENSPEMG00000013850	Ythdc1	92	69.853	Peromyscus_maniculatus_bairdii
ENSPNAG00000028365	ythdc1	93	70.746	ENSPCIG00000006870	YTHDC1	92	70.387	Phascolarctos_cinereus
ENSPNAG00000028365	ythdc1	57	67.696	ENSPFOG00000013404	ythdc1	94	62.423	Poecilia_formosa
ENSPNAG00000028365	ythdc1	57	67.696	ENSPLAG00000011079	ythdc1	85	74.321	Poecilia_latipinna
ENSPNAG00000028365	ythdc1	57	67.696	ENSPMEG00000009238	ythdc1	94	62.730	Poecilia_mexicana
ENSPNAG00000028365	ythdc1	57	67.595	ENSPREG00000016973	ythdc1	93	59.190	Poecilia_reticulata
ENSPNAG00000028365	ythdc1	76	74.823	ENSPPYG00000014726	YTHDC1	87	74.733	Pongo_abelii
ENSPNAG00000028365	ythdc1	77	73.043	ENSPCAG00000009607	YTHDC1	77	69.198	Procavia_capensis
ENSPNAG00000028365	ythdc1	93	65.280	ENSPCOG00000019105	YTHDC1	92	65.180	Propithecus_coquereli
ENSPNAG00000028365	ythdc1	60	82.599	ENSPVAG00000015551	YTHDC1	93	67.532	Pteropus_vampyrus
ENSPNAG00000028365	ythdc1	92	60.241	ENSPNYG00000011687	ythdc1	94	64.939	Pundamilia_nyererei
ENSPNAG00000028365	ythdc1	60	83.144	ENSRNOG00000001996	Ythdc1	93	67.429	Rattus_norvegicus
ENSPNAG00000028365	ythdc1	91	68.017	ENSRBIG00000028279	YTHDC1	96	67.173	Rhinopithecus_bieti
ENSPNAG00000028365	ythdc1	93	69.509	ENSRROG00000035028	YTHDC1	96	68.121	Rhinopithecus_roxellana
ENSPNAG00000028365	ythdc1	93	68.714	ENSSBOG00000022353	YTHDC1	96	68.121	Saimiri_boliviensis_boliviensis
ENSPNAG00000028365	ythdc1	93	70.105	ENSSHAG00000002538	YTHDC1	91	71.380	Sarcophilus_harrisii
ENSPNAG00000028365	ythdc1	93	79.136	ENSSFOG00015003298	ythdc1	93	78.539	Scleropages_formosus
ENSPNAG00000028365	ythdc1	92	59.347	ENSSMAG00000009086	ythdc1	94	63.982	Scophthalmus_maximus
ENSPNAG00000028365	ythdc1	92	62.085	ENSSDUG00000022008	ythdc1	94	65.402	Seriola_dumerili
ENSPNAG00000028365	ythdc1	92	61.805	ENSSLDG00000007926	ythdc1	94	65.250	Seriola_lalandi_dorsalis
ENSPNAG00000028365	ythdc1	70	78.227	ENSSARG00000010960	YTHDC1	72	84.919	Sorex_araneus
ENSPNAG00000028365	ythdc1	93	69.424	ENSSPUG00000009357	YTHDC1	97	68.477	Sphenodon_punctatus
ENSPNAG00000028365	ythdc1	92	60.574	ENSSPAG00000011449	ythdc1	94	64.795	Stegastes_partitus
ENSPNAG00000028365	ythdc1	85	67.638	ENSSSCG00000035505	YTHDC1	93	67.949	Sus_scrofa
ENSPNAG00000028365	ythdc1	93	70.815	ENSTGUG00000004452	-	92	69.926	Taeniopygia_guttata
ENSPNAG00000028365	ythdc1	57	63.246	ENSTRUG00000010142	ythdc1	62	69.479	Takifugu_rubripes
ENSPNAG00000028365	ythdc1	92	59.468	ENSTNIG00000013243	ythdc1	84	75.188	Tetraodon_nigroviridis
ENSPNAG00000028365	ythdc1	93	66.024	ENSTBEG00000011546	YTHDC1	92	65.875	Tupaia_belangeri
ENSPNAG00000028365	ythdc1	92	64.986	ENSTTRG00000005083	YTHDC1	93	68.497	Tursiops_truncatus
ENSPNAG00000028365	ythdc1	85	68.955	ENSUAMG00000010388	YTHDC1	92	68.858	Ursus_americanus
ENSPNAG00000028365	ythdc1	91	64.840	ENSUMAG00000013668	YTHDC1	90	64.079	Ursus_maritimus
ENSPNAG00000028365	ythdc1	93	67.391	ENSVPAG00000009040	YTHDC1	92	66.958	Vicugna_pacos
ENSPNAG00000028365	ythdc1	91	68.543	ENSVVUG00000005387	YTHDC1	92	68.750	Vulpes_vulpes
ENSPNAG00000028365	ythdc1	91	67.913	ENSXETG00000017960	ythdc1	91	67.863	Xenopus_tropicalis
ENSPNAG00000028365	ythdc1	54	55.208	ENSXCOG00000000530	ythdc1	82	60.643	Xiphophorus_couchianus
ENSPNAG00000028365	ythdc1	92	59.398	ENSXMAG00000005196	ythdc1	94	62.866	Xiphophorus_maculatus