EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000028816 (Gene tree)
Gene ID: 108424191
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 13955 bases
Position: chrKV575307.1:740003-753957
Accession: 108424191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000021642	Exo_endo_phos	PF03372.23	4.1e-21	1	1
ENSPNAP00000021628	Exo_endo_phos	PF03372.23	4.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000033151	-	5259	XM_017692026	ENSPNAP00000021628	566 (aa)	XP_017547515	UPI0008145DE1
ENSPNAT00000033123	-	5309	XM_017692028	ENSPNAP00000021642	558 (aa)	XP_017547517	UPI0008142AE9

Gene Model

Click here to download ENSPNAG00000028816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000028816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000028816	cnot6b	100	89.964	ENSPNAG00000029586	cnot6a	100	89.964
ENSPNAG00000028816	cnot6b	100	71.864	ENSPNAG00000003537	cnot6l	98	71.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000028816	cnot6b	100	85.305	ENSG00000113300	CNOT6	100	86.842	Homo_sapiens
ENSPNAG00000028816	cnot6b	100	90.698	ENSAPOG00000009994	cnot6b	100	90.698	Acanthochromis_polyacanthus
ENSPNAG00000028816	cnot6b	100	85.357	ENSAMEG00000000949	CNOT6	99	85.357	Ailuropoda_melanoleuca
ENSPNAG00000028816	cnot6b	100	88.551	ENSACIG00000016566	cnot6b	100	88.551	Amphilophus_citrinellus
ENSPNAG00000028816	cnot6b	100	90.698	ENSAOCG00000006893	cnot6b	100	90.698	Amphiprion_ocellaris
ENSPNAG00000028816	cnot6b	100	90.698	ENSAPEG00000016949	cnot6b	100	90.698	Amphiprion_percula
ENSPNAG00000028816	cnot6b	100	89.088	ENSATEG00000007862	cnot6b	100	89.088	Anabas_testudineus
ENSPNAG00000028816	cnot6b	100	86.380	ENSAPLG00000012715	CNOT6	99	86.380	Anas_platyrhynchos
ENSPNAG00000028816	cnot6b	100	85.305	ENSACAG00000016548	CNOT6	100	85.305	Anolis_carolinensis
ENSPNAG00000028816	cnot6b	100	85.125	ENSANAG00000030436	CNOT6	97	84.425	Aotus_nancymaae
ENSPNAG00000028816	cnot6b	100	88.909	ENSACLG00000008279	cnot6b	100	89.803	Astatotilapia_calliptera
ENSPNAG00000028816	cnot6b	100	89.785	ENSAMXG00000019140	cnot6a	100	89.785	Astyanax_mexicanus
ENSPNAG00000028816	cnot6b	100	94.982	ENSAMXG00000034694	cnot6b	100	94.982	Astyanax_mexicanus
ENSPNAG00000028816	cnot6b	100	85.484	ENSBTAG00000017362	CNOT6	100	85.484	Bos_taurus
ENSPNAG00000028816	cnot6b	100	85.125	ENSCJAG00000009795	CNOT6	100	85.125	Callithrix_jacchus
ENSPNAG00000028816	cnot6b	100	85.663	ENSCAFG00000000464	CNOT6	100	85.663	Canis_familiaris
ENSPNAG00000028816	cnot6b	100	85.663	ENSCAFG00020002441	CNOT6	100	85.663	Canis_lupus_dingo
ENSPNAG00000028816	cnot6b	100	85.125	ENSCHIG00000019100	CNOT6	100	85.125	Capra_hircus
ENSPNAG00000028816	cnot6b	100	84.946	ENSTSYG00000003982	CNOT6	100	84.946	Carlito_syrichta
ENSPNAG00000028816	cnot6b	100	80.466	ENSCPOG00000035657	CNOT6	100	80.466	Cavia_porcellus
ENSPNAG00000028816	cnot6b	100	80.645	ENSCCAG00000033670	CNOT6	100	80.645	Cebus_capucinus
ENSPNAG00000028816	cnot6b	100	85.305	ENSCATG00000042014	CNOT6	100	85.305	Cercocebus_atys
ENSPNAG00000028816	cnot6b	100	84.409	ENSCLAG00000010489	CNOT6	100	84.409	Chinchilla_lanigera
ENSPNAG00000028816	cnot6b	100	85.305	ENSCSAG00000008165	CNOT6	100	85.305	Chlorocebus_sabaeus
ENSPNAG00000028816	cnot6b	100	85.842	ENSCHOG00000009680	CNOT6	100	85.842	Choloepus_hoffmanni
ENSPNAG00000028816	cnot6b	100	86.201	ENSCPBG00000008908	CNOT6	100	86.201	Chrysemys_picta_bellii
ENSPNAG00000028816	cnot6b	100	85.484	ENSCANG00000026756	CNOT6	100	85.484	Colobus_angolensis_palliatus
ENSPNAG00000028816	cnot6b	100	84.050	ENSCGRG00001011452	Cnot6	100	84.050	Cricetulus_griseus_chok1gshd
ENSPNAG00000028816	cnot6b	100	82.079	ENSCGRG00000010407	Cnot6	100	82.079	Cricetulus_griseus_crigri
ENSPNAG00000028816	cnot6b	100	89.624	ENSCSEG00000010939	cnot6b	100	89.624	Cynoglossus_semilaevis
ENSPNAG00000028816	cnot6b	100	88.730	ENSCVAG00000010538	cnot6b	100	88.730	Cyprinodon_variegatus
ENSPNAG00000028816	cnot6b	100	89.427	ENSDARG00000008255	cnot6a	100	89.427	Danio_rerio
ENSPNAG00000028816	cnot6b	100	87.276	ENSDARG00000101072	cnot6b	100	87.276	Danio_rerio
ENSPNAG00000028816	cnot6b	100	86.022	ENSDNOG00000041644	CNOT6	100	86.022	Dasypus_novemcinctus
ENSPNAG00000028816	cnot6b	100	77.240	ENSDORG00000001708	Cnot6	100	77.240	Dipodomys_ordii
ENSPNAG00000028816	cnot6b	100	68.694	ENSETEG00000006975	CNOT6	100	68.694	Echinops_telfairi
ENSPNAG00000028816	cnot6b	100	85.305	ENSEASG00005012794	-	100	85.305	Equus_asinus_asinus
ENSPNAG00000028816	cnot6b	90	80.639	ENSEASG00005012957	-	99	80.639	Equus_asinus_asinus
ENSPNAG00000028816	cnot6b	100	85.842	ENSECAG00000019325	CNOT6	100	85.842	Equus_caballus
ENSPNAG00000028816	cnot6b	100	80.287	ENSECAG00000012704	-	99	80.287	Equus_caballus
ENSPNAG00000028816	cnot6b	100	84.767	ENSEEUG00000015382	CNOT6	100	84.767	Erinaceus_europaeus
ENSPNAG00000028816	cnot6b	100	86.772	ENSELUG00000015981	cnot6b	99	86.772	Esox_lucius
ENSPNAG00000028816	cnot6b	100	85.484	ENSELUG00000024580	cnot6a	100	85.484	Esox_lucius
ENSPNAG00000028816	cnot6b	100	85.663	ENSFCAG00000001881	CNOT6	100	85.663	Felis_catus
ENSPNAG00000028816	cnot6b	100	86.559	ENSFALG00000007699	CNOT6	100	86.559	Ficedula_albicollis
ENSPNAG00000028816	cnot6b	100	84.588	ENSFDAG00000001999	CNOT6	100	84.588	Fukomys_damarensis
ENSPNAG00000028816	cnot6b	68	85.625	ENSFHEG00000013756	cnot6b	99	85.625	Fundulus_heteroclitus
ENSPNAG00000028816	cnot6b	95	90.359	ENSGMOG00000009767	cnot6b	99	90.359	Gadus_morhua
ENSPNAG00000028816	cnot6b	100	86.380	ENSGALG00000034316	CNOT6	100	86.380	Gallus_gallus
ENSPNAG00000028816	cnot6b	100	89.088	ENSGAFG00000008525	cnot6b	100	89.088	Gambusia_affinis
ENSPNAG00000028816	cnot6b	95	88.280	ENSGACG00000018046	cnot6b	99	88.280	Gasterosteus_aculeatus
ENSPNAG00000028816	cnot6b	100	71.505	ENSGAGG00000012176	CNOT6	100	71.505	Gopherus_agassizii
ENSPNAG00000028816	cnot6b	100	85.305	ENSGGOG00000003675	CNOT6	100	85.305	Gorilla_gorilla
ENSPNAG00000028816	cnot6b	100	89.088	ENSHBUG00000002819	cnot6b	100	89.982	Haplochromis_burtoni
ENSPNAG00000028816	cnot6b	100	84.229	ENSHGLG00000017756	CNOT6	100	84.229	Heterocephalus_glaber_female
ENSPNAG00000028816	cnot6b	100	84.229	ENSHGLG00100005747	CNOT6	100	84.229	Heterocephalus_glaber_male
ENSPNAG00000028816	cnot6b	100	87.299	ENSHCOG00000016176	cnot6b	100	88.193	Hippocampus_comes
ENSPNAG00000028816	cnot6b	100	88.889	ENSIPUG00000019831	cnot6a	100	88.889	Ictalurus_punctatus
ENSPNAG00000028816	cnot6b	100	92.832	ENSIPUG00000017482	cnot6b	100	92.832	Ictalurus_punctatus
ENSPNAG00000028816	cnot6b	100	85.125	ENSSTOG00000002803	CNOT6	100	85.125	Ictidomys_tridecemlineatus
ENSPNAG00000028816	cnot6b	100	84.409	ENSJJAG00000012296	Cnot6	100	84.409	Jaculus_jaculus
ENSPNAG00000028816	cnot6b	100	88.372	ENSKMAG00000004640	cnot6b	100	88.372	Kryptolebias_marmoratus
ENSPNAG00000028816	cnot6b	100	88.193	ENSLBEG00000027917	cnot6b	100	89.088	Labrus_bergylta
ENSPNAG00000028816	cnot6b	100	91.577	ENSLOCG00000010102	cnot6b	99	91.577	Lepisosteus_oculatus
ENSPNAG00000028816	cnot6b	100	86.380	ENSLAFG00000016742	CNOT6	100	86.380	Loxodonta_africana
ENSPNAG00000028816	cnot6b	100	85.305	ENSMFAG00000030867	CNOT6	100	85.305	Macaca_fascicularis
ENSPNAG00000028816	cnot6b	100	85.305	ENSMMUG00000018690	CNOT6	100	85.305	Macaca_mulatta
ENSPNAG00000028816	cnot6b	100	85.305	ENSMNEG00000038565	CNOT6	100	85.305	Macaca_nemestrina
ENSPNAG00000028816	cnot6b	100	85.305	ENSMLEG00000010555	CNOT6	100	85.305	Mandrillus_leucophaeus
ENSPNAG00000028816	cnot6b	100	90.877	ENSMAMG00000007515	cnot6b	100	90.877	Mastacembelus_armatus
ENSPNAG00000028816	cnot6b	100	88.909	ENSMZEG00005012899	cnot6b	100	89.803	Maylandia_zebra
ENSPNAG00000028816	cnot6b	100	84.767	ENSMAUG00000019798	Cnot6	100	84.767	Mesocricetus_auratus
ENSPNAG00000028816	cnot6b	100	83.871	ENSMICG00000013018	-	100	83.871	Microcebus_murinus
ENSPNAG00000028816	cnot6b	98	77.431	ENSMICG00000028378	-	99	77.431	Microcebus_murinus
ENSPNAG00000028816	cnot6b	100	84.767	ENSMOCG00000021662	Cnot6	100	84.767	Microtus_ochrogaster
ENSPNAG00000028816	cnot6b	100	88.351	ENSMMOG00000003227	cnot6b	100	88.351	Mola_mola
ENSPNAG00000028816	cnot6b	100	86.022	ENSMODG00000003979	CNOT6	100	86.022	Monodelphis_domestica
ENSPNAG00000028816	cnot6b	100	90.519	ENSMALG00000014251	cnot6b	100	90.519	Monopterus_albus
ENSPNAG00000028816	cnot6b	100	84.946	MGP_CAROLIEiJ_G0016277	Cnot6	100	84.946	Mus_caroli
ENSPNAG00000028816	cnot6b	100	84.946	ENSMUSG00000020362	Cnot6	100	84.946	Mus_musculus
ENSPNAG00000028816	cnot6b	100	84.946	MGP_PahariEiJ_G0017413	Cnot6	100	84.946	Mus_pahari
ENSPNAG00000028816	cnot6b	100	84.946	MGP_SPRETEiJ_G0017122	Cnot6	100	84.946	Mus_spretus
ENSPNAG00000028816	cnot6b	100	86.022	ENSMPUG00000000587	CNOT6	96	86.022	Mustela_putorius_furo
ENSPNAG00000028816	cnot6b	100	83.659	ENSMLUG00000010257	CNOT6	100	83.659	Myotis_lucifugus
ENSPNAG00000028816	cnot6b	100	84.229	ENSNGAG00000008269	Cnot6	100	84.229	Nannospalax_galili
ENSPNAG00000028816	cnot6b	100	89.088	ENSNBRG00000010798	cnot6b	100	89.982	Neolamprologus_brichardi
ENSPNAG00000028816	cnot6b	100	84.229	ENSNLEG00000002322	CNOT6	100	84.229	Nomascus_leucogenys
ENSPNAG00000028816	cnot6b	81	83.721	ENSMEUG00000000025	CNOT6	81	83.721	Notamacropus_eugenii
ENSPNAG00000028816	cnot6b	88	85.952	ENSOPRG00000008244	-	88	85.952	Ochotona_princeps
ENSPNAG00000028816	cnot6b	100	83.871	ENSODEG00000007041	CNOT6	100	83.871	Octodon_degus
ENSPNAG00000028816	cnot6b	75	91.017	ENSONIG00000013027	cnot6b	99	91.017	Oreochromis_niloticus
ENSPNAG00000028816	cnot6b	100	84.767	ENSOANG00000010226	CNOT6	100	84.767	Ornithorhynchus_anatinus
ENSPNAG00000028816	cnot6b	100	84.286	ENSOCUG00000011083	CNOT6	100	84.286	Oryctolagus_cuniculus
ENSPNAG00000028816	cnot6b	100	89.982	ENSORLG00000005059	cnot6b	100	89.982	Oryzias_latipes
ENSPNAG00000028816	cnot6b	100	89.982	ENSORLG00020012784	cnot6b	100	89.982	Oryzias_latipes_hni
ENSPNAG00000028816	cnot6b	94	90.057	ENSORLG00015022658	cnot6b	98	90.057	Oryzias_latipes_hsok
ENSPNAG00000028816	cnot6b	100	90.340	ENSOMEG00000005295	cnot6b	100	90.340	Oryzias_melastigma
ENSPNAG00000028816	cnot6b	94	84.952	ENSOGAG00000032470	CNOT6	100	84.952	Otolemur_garnettii
ENSPNAG00000028816	cnot6b	97	84.715	ENSOARG00000001003	CNOT6	100	84.715	Ovis_aries
ENSPNAG00000028816	cnot6b	100	85.305	ENSPPAG00000032253	CNOT6	100	85.305	Pan_paniscus
ENSPNAG00000028816	cnot6b	100	85.484	ENSPPRG00000011912	CNOT6	100	85.484	Panthera_pardus
ENSPNAG00000028816	cnot6b	100	85.484	ENSPTIG00000016794	CNOT6	100	85.484	Panthera_tigris_altaica
ENSPNAG00000028816	cnot6b	100	85.305	ENSPTRG00000017636	CNOT6	100	85.305	Pan_troglodytes
ENSPNAG00000028816	cnot6b	100	85.305	ENSPANG00000016191	CNOT6	100	85.305	Papio_anubis
ENSPNAG00000028816	cnot6b	100	89.785	ENSPKIG00000021368	cnot6b	100	89.785	Paramormyrops_kingsleyae
ENSPNAG00000028816	cnot6b	98	86.606	ENSPSIG00000017307	CNOT6	100	86.606	Pelodiscus_sinensis
ENSPNAG00000028816	cnot6b	100	89.445	ENSPMGG00000011238	cnot6b	100	89.445	Periophthalmus_magnuspinnatus
ENSPNAG00000028816	cnot6b	100	84.050	ENSPEMG00000000627	Cnot6	100	84.050	Peromyscus_maniculatus_bairdii
ENSPNAG00000028816	cnot6b	100	86.022	ENSPCIG00000020319	CNOT6	99	86.047	Phascolarctos_cinereus
ENSPNAG00000028816	cnot6b	100	89.088	ENSPFOG00000006291	cnot6b	100	89.088	Poecilia_formosa
ENSPNAG00000028816	cnot6b	100	85.331	ENSPLAG00000008266	cnot6b	100	85.331	Poecilia_latipinna
ENSPNAG00000028816	cnot6b	100	89.267	ENSPMEG00000009091	cnot6b	100	89.267	Poecilia_mexicana
ENSPNAG00000028816	cnot6b	100	88.014	ENSPREG00000003713	cnot6b	100	88.014	Poecilia_reticulata
ENSPNAG00000028816	cnot6b	100	85.305	ENSPPYG00000016137	CNOT6	100	85.305	Pongo_abelii
ENSPNAG00000028816	cnot6b	71	84.270	ENSPCAG00000005599	-	71	84.270	Procavia_capensis
ENSPNAG00000028816	cnot6b	100	79.749	ENSPCOG00000017359	CNOT6	100	80.466	Propithecus_coquereli
ENSPNAG00000028816	cnot6b	100	82.616	ENSPVAG00000003069	CNOT6	100	82.616	Pteropus_vampyrus
ENSPNAG00000028816	cnot6b	100	89.088	ENSPNYG00000000321	cnot6b	100	89.982	Pundamilia_nyererei
ENSPNAG00000028816	cnot6b	100	84.409	ENSRNOG00000054891	Cnot6	100	84.409	Rattus_norvegicus
ENSPNAG00000028816	cnot6b	100	85.125	ENSRBIG00000004309	CNOT6	100	85.125	Rhinopithecus_bieti
ENSPNAG00000028816	cnot6b	100	85.125	ENSRROG00000035378	CNOT6	100	85.125	Rhinopithecus_roxellana
ENSPNAG00000028816	cnot6b	100	85.125	ENSSBOG00000030494	CNOT6	100	85.125	Saimiri_boliviensis_boliviensis
ENSPNAG00000028816	cnot6b	100	86.022	ENSSHAG00000017436	CNOT6	100	86.022	Sarcophilus_harrisii
ENSPNAG00000028816	cnot6b	100	91.935	ENSSFOG00015015133	CNOT6	100	91.935	Scleropages_formosus
ENSPNAG00000028816	cnot6b	100	90.143	ENSSFOG00015022383	cnot6a	96	90.143	Scleropages_formosus
ENSPNAG00000028816	cnot6b	100	89.624	ENSSMAG00000003084	cnot6b	100	89.624	Scophthalmus_maximus
ENSPNAG00000028816	cnot6b	100	90.877	ENSSDUG00000004151	cnot6b	100	90.877	Seriola_dumerili
ENSPNAG00000028816	cnot6b	100	90.161	ENSSLDG00000004448	cnot6b	100	91.055	Seriola_lalandi_dorsalis
ENSPNAG00000028816	cnot6b	64	67.967	ENSSARG00000012650	-	100	67.967	Sorex_araneus
ENSPNAG00000028816	cnot6b	100	86.022	ENSSPUG00000007893	CNOT6	100	86.022	Sphenodon_punctatus
ENSPNAG00000028816	cnot6b	100	90.877	ENSSPAG00000000149	cnot6b	100	90.877	Stegastes_partitus
ENSPNAG00000028816	cnot6b	100	85.484	ENSSSCG00000014009	CNOT6	100	85.484	Sus_scrofa
ENSPNAG00000028816	cnot6b	100	86.201	ENSTGUG00000001119	CNOT6	100	86.201	Taeniopygia_guttata
ENSPNAG00000028816	cnot6b	100	87.276	ENSTRUG00000002818	cnot6b	100	87.276	Takifugu_rubripes
ENSPNAG00000028816	cnot6b	100	88.351	ENSTNIG00000004443	cnot6b	99	88.351	Tetraodon_nigroviridis
ENSPNAG00000028816	cnot6b	76	76.119	ENSTBEG00000017094	-	87	76.119	Tupaia_belangeri
ENSPNAG00000028816	cnot6b	100	85.305	ENSTTRG00000009363	CNOT6	100	85.305	Tursiops_truncatus
ENSPNAG00000028816	cnot6b	90	75.149	ENSUAMG00000004579	CNOT6	99	75.149	Ursus_americanus
ENSPNAG00000028816	cnot6b	100	81.538	ENSUMAG00000024577	CNOT6	100	81.538	Ursus_maritimus
ENSPNAG00000028816	cnot6b	84	83.784	ENSVPAG00000003593	CNOT6	83	83.784	Vicugna_pacos
ENSPNAG00000028816	cnot6b	100	85.663	ENSVVUG00000026940	CNOT6	100	85.663	Vulpes_vulpes
ENSPNAG00000028816	cnot6b	100	85.689	ENSXCOG00000003360	cnot6b	100	85.689	Xiphophorus_couchianus
ENSPNAG00000028816	cnot6b	100	89.267	ENSXMAG00000008730	cnot6b	100	89.267	Xiphophorus_maculatus