EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000028914 (Gene tree)
Gene ID: 108425948
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC108425948
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 23007 bases
Position: chrKV575322.1:408221-431227
Accession: 108425948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000021764	PARP	PF00644.20	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000033360	-	6531	XM_017695040	ENSPNAP00000021764	1385 (aa)	XP_017550529	UPI0008143824

Gene Model

Click here to download ENSPNAG00000028914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000028914's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000028914	-	99	75.410	ENSPNAG00000005968	-	88	74.059
ENSPNAG00000028914	-	70	32.234	ENSPNAG00000028188	si:ch211-219a4.3	64	32.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000028914	-	64	63.840	ENSAMXG00000010209	-	62	63.840	Astyanax_mexicanus
ENSPNAG00000028914	-	90	53.713	ENSELUG00000004826	-	63	53.713	Esox_lucius
ENSPNAG00000028914	-	84	47.883	ENSPKIG00000004064	-	64	47.883	Paramormyrops_kingsleyae
ENSPNAG00000028914	-	64	31.620	ENSSFOG00015006999	-	54	31.620	Scleropages_formosus
ENSPNAG00000028914	-	84	61.446	ENSSFOG00015019732	-	66	61.446	Scleropages_formosus