EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000029447 (Gene tree)
Gene ID: 108437164
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 29444 bases
Position: chrKV575512.1:1188281-1217724
Accession: 108437164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000022109	Ribonuc_2-5A	PF06479.12	1.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000034033	-	6048	XM_017714085	ENSPNAP00000022109	1032 (aa)	XP_017569574	UPI0008143B9C

Gene Model

Click here to download ENSPNAG00000029447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000029447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000029447	ern1	90	57.721	ENSPNAG00000014531	ern2	99	56.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000029447	ern1	99	80.769	ENSAPOG00000009999	ern1	95	80.481	Acanthochromis_polyacanthus
ENSPNAG00000029447	ern1	99	82.074	ENSACIG00000021716	ern1	93	81.571	Amphilophus_citrinellus
ENSPNAG00000029447	ern1	99	80.152	ENSAOCG00000012309	ern1	97	79.867	Amphiprion_ocellaris
ENSPNAG00000029447	ern1	99	79.037	ENSAPEG00000011263	ern1	99	85.161	Amphiprion_percula
ENSPNAG00000029447	ern1	99	80.943	ENSATEG00000024468	ern1	94	80.751	Anabas_testudineus
ENSPNAG00000029447	ern1	99	79.944	ENSACLG00000027919	ern1	97	79.755	Astatotilapia_calliptera
ENSPNAG00000029447	ern1	100	87.824	ENSAMXG00000000944	ern1	100	87.728	Astyanax_mexicanus
ENSPNAG00000029447	ern1	97	81.412	ENSCSEG00000014500	ern1	99	79.653	Cynoglossus_semilaevis
ENSPNAG00000029447	ern1	90	85.684	ENSCVAG00000002988	ern1	94	82.622	Cyprinodon_variegatus
ENSPNAG00000029447	ern1	95	84.061	ENSDARG00000013997	ern1	100	84.599	Danio_rerio
ENSPNAG00000029447	ern1	99	75.526	ENSELUG00000005957	ern1	99	75.333	Esox_lucius
ENSPNAG00000029447	ern1	98	80.989	ENSFHEG00000005578	ern1	97	80.874	Fundulus_heteroclitus
ENSPNAG00000029447	ern1	90	83.138	ENSGMOG00000011232	ern1	99	83.138	Gadus_morhua
ENSPNAG00000029447	ern1	99	80.284	ENSGAFG00000020231	ern1	99	79.905	Gambusia_affinis
ENSPNAG00000029447	ern1	91	84.144	ENSGACG00000011700	ern1	97	84.739	Gasterosteus_aculeatus
ENSPNAG00000029447	ern1	99	79.981	ENSHBUG00000012581	ern1	95	80.668	Haplochromis_burtoni
ENSPNAG00000029447	ern1	99	79.195	ENSHCOG00000016199	ern1	98	79.003	Hippocampus_comes
ENSPNAG00000029447	ern1	100	85.509	ENSIPUG00000011083	ern1	100	85.509	Ictalurus_punctatus
ENSPNAG00000029447	ern1	93	83.160	ENSKMAG00000019499	ern1	95	79.357	Kryptolebias_marmoratus
ENSPNAG00000029447	ern1	96	77.908	ENSLBEG00000025907	ern1	94	77.615	Labrus_bergylta
ENSPNAG00000029447	ern1	99	80.478	ENSMAMG00000023439	ern1	95	81.594	Mastacembelus_armatus
ENSPNAG00000029447	ern1	99	79.944	ENSMZEG00005003221	ern1	97	79.755	Maylandia_zebra
ENSPNAG00000029447	ern1	94	83.094	ENSMMOG00000007650	ern1	97	82.787	Mola_mola
ENSPNAG00000029447	ern1	94	83.828	ENSMALG00000017775	ern1	89	83.521	Monopterus_albus
ENSPNAG00000029447	ern1	99	79.789	ENSNBRG00000002179	ern1	96	79.598	Neolamprologus_brichardi
ENSPNAG00000029447	ern1	91	85.095	ENSONIG00000017169	ern1	97	84.884	Oreochromis_niloticus
ENSPNAG00000029447	ern1	99	79.409	ENSORLG00000008940	ern1	93	81.964	Oryzias_latipes
ENSPNAG00000029447	ern1	94	83.676	ENSORLG00020018387	ern1	93	82.064	Oryzias_latipes_hni
ENSPNAG00000029447	ern1	99	78.952	ENSORLG00015007946	ern1	97	78.578	Oryzias_latipes_hsok
ENSPNAG00000029447	ern1	99	79.619	ENSOMEG00000011741	ern1	97	79.429	Oryzias_melastigma
ENSPNAG00000029447	ern1	94	82.371	ENSPKIG00000005593	ern1	99	82.165	Paramormyrops_kingsleyae
ENSPNAG00000029447	ern1	99	80.077	ENSPMGG00000020442	ern1	97	81.518	Periophthalmus_magnuspinnatus
ENSPNAG00000029447	ern1	99	80.574	ENSPFOG00000007378	ern1	98	80.478	Poecilia_formosa
ENSPNAG00000029447	ern1	99	80.792	ENSPLAG00000014780	ern1	98	80.478	Poecilia_latipinna
ENSPNAG00000029447	ern1	99	80.670	ENSPMEG00000016324	ern1	98	80.574	Poecilia_mexicana
ENSPNAG00000029447	ern1	99	80.344	ENSPREG00000006286	ern1	98	80.287	Poecilia_reticulata
ENSPNAG00000029447	ern1	97	82.411	ENSPNYG00000017929	ern1	97	82.213	Pundamilia_nyererei
ENSPNAG00000029447	ern1	99	78.715	ENSSMAG00000015042	ern1	95	78.428	Scophthalmus_maximus
ENSPNAG00000029447	ern1	97	83.680	ENSSDUG00000009098	ern1	91	83.383	Seriola_dumerili
ENSPNAG00000029447	ern1	99	81.721	ENSSLDG00000023254	ern1	93	81.431	Seriola_lalandi_dorsalis
ENSPNAG00000029447	ern1	99	80.460	ENSSPAG00000017539	ern1	97	80.077	Stegastes_partitus
ENSPNAG00000029447	ern1	96	80.658	ENSTRUG00000001041	ern1	95	80.459	Takifugu_rubripes
ENSPNAG00000029447	ern1	90	85.134	ENSTNIG00000017990	ern1	98	84.803	Tetraodon_nigroviridis
ENSPNAG00000029447	ern1	98	82.203	ENSXCOG00000010330	ern1	98	83.233	Xiphophorus_couchianus
ENSPNAG00000029447	ern1	98	81.641	ENSXMAG00000001310	ern1	96	81.543	Xiphophorus_maculatus