EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000029574 (Gene tree)
Gene ID: 108425914
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein ORAB-1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 3593 bases
Position: chrKV575321.1:4205734-4209326
Accession: 108425914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000022250	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000034226	-	279	-	ENSPNAP00000022221	92 (aa)	-	-
ENSPNAT00000034292	-	1625	XM_017694988	ENSPNAP00000022250	210 (aa)	XP_017550477	UPI000814AA04

Gene Model

Click here to download ENSPNAG00000029574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000029574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000029574	zgc:171927	80	49.112	ENSPNAG00000015031	rab12	69	49.112
ENSPNAG00000029574	zgc:171927	82	30.890	ENSPNAG00000007710	rasl11a	75	30.890
ENSPNAG00000029574	zgc:171927	76	30.303	ENSPNAG00000025619	dnajc27	60	30.303
ENSPNAG00000029574	zgc:171927	90	34.737	ENSPNAG00000005519	-	90	34.737
ENSPNAG00000029574	zgc:171927	85	41.622	ENSPNAG00000022929	rab33a	61	41.622
ENSPNAG00000029574	zgc:171927	56	30.081	ENSPNAG00000016262	arf2a	62	30.081
ENSPNAG00000029574	zgc:171927	99	46.154	ENSPNAG00000029085	rab11al	96	46.154
ENSPNAG00000029574	zgc:171927	56	35.043	ENSPNAG00000008867	rab20	58	33.333
ENSPNAG00000029574	zgc:171927	99	38.028	ENSPNAG00000016567	rab42a	100	38.028
ENSPNAG00000029574	zgc:171927	99	45.024	ENSPNAG00000011215	rab15	99	45.024
ENSPNAG00000029574	zgc:171927	79	37.278	ENSPNAG00000016600	-	82	37.278
ENSPNAG00000029574	zgc:171927	92	49.485	ENSPNAG00000010760	rab30	92	49.485
ENSPNAG00000029574	zgc:171927	74	41.509	ENSPNAG00000017938	RAB9A	73	41.509
ENSPNAG00000029574	zgc:171927	95	37.264	ENSPNAG00000021994	rab36	79	37.264
ENSPNAG00000029574	zgc:171927	86	30.729	ENSPNAG00000028497	si:cabz01085950.1	93	30.729
ENSPNAG00000029574	zgc:171927	86	47.222	ENSPNAG00000003227	rab3c	89	45.408
ENSPNAG00000029574	zgc:171927	92	46.939	ENSPNAG00000002404	rab18b	95	46.939
ENSPNAG00000029574	zgc:171927	80	56.805	ENSPNAG00000004189	rab13	89	56.805
ENSPNAG00000029574	zgc:171927	79	33.533	ENSPNAG00000004728	rheb	90	33.533
ENSPNAG00000029574	zgc:171927	98	42.584	ENSPNAG00000006569	rab25b	96	42.584
ENSPNAG00000029574	zgc:171927	78	45.399	ENSPNAG00000028138	rab5c	74	45.399
ENSPNAG00000029574	zgc:171927	79	38.462	ENSPNAG00000020583	zgc:100918	82	38.462
ENSPNAG00000029574	zgc:171927	91	82.199	ENSPNAG00000013863	rab1ab	86	82.199
ENSPNAG00000029574	zgc:171927	56	30.081	ENSPNAG00000009407	arf3b	62	30.081
ENSPNAG00000029574	zgc:171927	79	50.299	ENSPNAG00000011548	rab18a	83	50.299
ENSPNAG00000029574	zgc:171927	79	43.529	ENSPNAG00000017856	zgc:101559	74	43.529
ENSPNAG00000029574	zgc:171927	98	42.233	ENSPNAG00000000694	rab25a	96	42.233
ENSPNAG00000029574	zgc:171927	67	30.496	ENSPNAG00000027037	arl3	76	30.496
ENSPNAG00000029574	zgc:171927	91	37.374	ENSPNAG00000028379	rab6ba	93	37.374
ENSPNAG00000029574	zgc:171927	78	35.758	ENSPNAG00000014085	hrasa	86	35.758
ENSPNAG00000029574	zgc:171927	73	37.419	ENSPNAG00000024254	rabl2	67	37.419
ENSPNAG00000029574	zgc:171927	80	54.167	ENSPNAG00000014863	rab11a	78	54.167
ENSPNAG00000029574	zgc:171927	85	50.000	ENSPNAG00000020475	rab11ba	84	50.000
ENSPNAG00000029574	zgc:171927	79	35.928	ENSPNAG00000013747	mras	80	35.928
ENSPNAG00000029574	zgc:171927	74	38.217	ENSPNAG00000018361	rras	81	38.217
ENSPNAG00000029574	zgc:171927	76	38.596	ENSPNAG00000017466	rab38b	79	38.596
ENSPNAG00000029574	zgc:171927	85	38.764	ENSPNAG00000010157	rab6bb	84	38.764
ENSPNAG00000029574	zgc:171927	81	47.953	ENSPNAG00000015810	RAB15	83	47.953
ENSPNAG00000029574	zgc:171927	81	36.047	ENSPNAG00000026295	si:ch73-116o1.2	84	35.429
ENSPNAG00000029574	zgc:171927	88	49.468	ENSPNAG00000011193	rab2a	99	47.418
ENSPNAG00000029574	zgc:171927	78	46.626	ENSPNAG00000002218	-	77	46.626
ENSPNAG00000029574	zgc:171927	79	38.596	ENSPNAG00000014146	-	80	38.596
ENSPNAG00000029574	zgc:171927	74	38.994	ENSPNAG00000007277	RAB9A	75	38.994
ENSPNAG00000029574	zgc:171927	79	63.253	ENSPNAG00000018986	si:dkey-16l2.16	79	62.874
ENSPNAG00000029574	zgc:171927	86	34.225	ENSPNAG00000024728	rab23	84	34.171
ENSPNAG00000029574	zgc:171927	78	35.758	ENSPNAG00000000584	hrasb	86	35.758
ENSPNAG00000029574	zgc:171927	99	45.755	ENSPNAG00000006431	-	96	45.755
ENSPNAG00000029574	zgc:171927	70	41.060	ENSPNAG00000015040	rab34b	68	41.975
ENSPNAG00000029574	zgc:171927	80	44.444	ENSPNAG00000013897	rab39ba	80	44.444
ENSPNAG00000029574	zgc:171927	56	30.252	ENSPNAG00000028458	arl4cb	61	30.252
ENSPNAG00000029574	zgc:171927	75	39.130	ENSPNAG00000003179	rab34a	62	39.130
ENSPNAG00000029574	zgc:171927	77	39.157	ENSPNAG00000018132	rab9b	74	39.157
ENSPNAG00000029574	zgc:171927	59	31.008	ENSPNAG00000019262	arl2	65	31.008
ENSPNAG00000029574	zgc:171927	83	37.640	ENSPNAG00000015164	-	86	37.640
ENSPNAG00000029574	zgc:171927	96	37.313	ENSPNAG00000015161	rab22a	97	37.313
ENSPNAG00000029574	zgc:171927	78	46.012	ENSPNAG00000023223	rab5aa	75	46.012
ENSPNAG00000029574	zgc:171927	95	44.000	ENSPNAG00000014363	-	92	44.000
ENSPNAG00000029574	zgc:171927	92	81.959	ENSPNAG00000012540	-	96	81.959
ENSPNAG00000029574	zgc:171927	92	36.410	ENSPNAG00000021737	rab41	91	36.410
ENSPNAG00000029574	zgc:171927	80	42.857	ENSPNAG00000021675	-	78	42.857
ENSPNAG00000029574	zgc:171927	56	30.081	ENSPNAG00000006183	arf2b	62	30.081
ENSPNAG00000029574	zgc:171927	77	66.667	ENSPNAG00000014046	-	80	66.667
ENSPNAG00000029574	zgc:171927	78	45.399	ENSPNAG00000009496	rab5ab	75	45.399
ENSPNAG00000029574	zgc:171927	94	80.808	ENSPNAG00000013004	rab1ba	98	80.808
ENSPNAG00000029574	zgc:171927	84	36.517	ENSPNAG00000028629	kras	92	36.932
ENSPNAG00000029574	zgc:171927	67	30.496	ENSPNAG00000014755	zgc:110197	77	30.496
ENSPNAG00000029574	zgc:171927	67	30.496	ENSPNAG00000004165	-	75	30.496
ENSPNAG00000029574	zgc:171927	80	41.989	ENSPNAG00000029115	rab33ba	82	41.530
ENSPNAG00000029574	zgc:171927	80	45.029	ENSPNAG00000013589	rab39bb	80	45.029
ENSPNAG00000029574	zgc:171927	56	31.092	ENSPNAG00000007188	ARL4D	56	31.092
ENSPNAG00000029574	zgc:171927	56	30.081	ENSPNAG00000003824	arf3a	62	30.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000029574	zgc:171927	100	80.465	ENSAPOG00000004980	-	100	80.465	Acanthochromis_polyacanthus
ENSPNAG00000029574	zgc:171927	100	80.465	ENSACIG00000009006	zgc:171927	100	80.465	Amphilophus_citrinellus
ENSPNAG00000029574	zgc:171927	72	85.161	ENSAOCG00000013808	-	93	94.215	Amphiprion_ocellaris
ENSPNAG00000029574	zgc:171927	100	79.070	ENSAOCG00000024149	-	100	79.070	Amphiprion_ocellaris
ENSPNAG00000029574	zgc:171927	100	79.535	ENSAPEG00000022171	zgc:171927	99	79.535	Amphiprion_percula
ENSPNAG00000029574	zgc:171927	100	79.535	ENSATEG00000003430	zgc:171927	100	79.535	Anabas_testudineus
ENSPNAG00000029574	zgc:171927	100	79.812	ENSACLG00000013734	-	100	79.812	Astatotilapia_calliptera
ENSPNAG00000029574	zgc:171927	100	97.143	ENSAMXG00000039486	zgc:171927	100	97.143	Astyanax_mexicanus
ENSPNAG00000029574	zgc:171927	100	78.605	ENSCSEG00000014416	zgc:171927	100	78.605	Cynoglossus_semilaevis
ENSPNAG00000029574	zgc:171927	100	79.535	ENSCVAG00000009222	zgc:171927	100	79.535	Cyprinodon_variegatus
ENSPNAG00000029574	zgc:171927	100	91.905	ENSDARG00000033056	zgc:171927	100	91.905	Danio_rerio
ENSPNAG00000029574	zgc:171927	100	85.308	ENSELUG00000011680	zgc:171927	100	85.308	Esox_lucius
ENSPNAG00000029574	zgc:171927	100	78.605	ENSFHEG00000022176	zgc:171927	100	78.605	Fundulus_heteroclitus
ENSPNAG00000029574	zgc:171927	98	73.558	ENSGMOG00000004979	-	97	73.558	Gadus_morhua
ENSPNAG00000029574	zgc:171927	98	78.095	ENSGAFG00000015702	zgc:171927	84	78.095	Gambusia_affinis
ENSPNAG00000029574	zgc:171927	100	79.535	ENSGACG00000013401	zgc:171927	99	79.535	Gasterosteus_aculeatus
ENSPNAG00000029574	zgc:171927	100	79.812	ENSHBUG00000002397	-	100	79.812	Haplochromis_burtoni
ENSPNAG00000029574	zgc:171927	100	78.605	ENSKMAG00000009856	zgc:171927	100	78.605	Kryptolebias_marmoratus
ENSPNAG00000029574	zgc:171927	100	79.070	ENSLBEG00000005791	-	100	79.070	Labrus_bergylta
ENSPNAG00000029574	zgc:171927	98	78.571	ENSLBEG00000027226	-	89	78.469	Labrus_bergylta
ENSPNAG00000029574	zgc:171927	98	77.561	ENSLOCG00000014692	zgc:171927	96	77.561	Lepisosteus_oculatus
ENSPNAG00000029574	zgc:171927	100	79.070	ENSMAMG00000020135	zgc:171927	100	79.070	Mastacembelus_armatus
ENSPNAG00000029574	zgc:171927	100	79.812	ENSMZEG00005024685	-	100	79.812	Maylandia_zebra
ENSPNAG00000029574	zgc:171927	100	77.209	ENSMMOG00000009833	-	100	77.209	Mola_mola
ENSPNAG00000029574	zgc:171927	100	80.282	ENSMALG00000021129	zgc:171927	100	80.282	Monopterus_albus
ENSPNAG00000029574	zgc:171927	100	79.343	ENSNBRG00000006202	zgc:171927	100	79.343	Neolamprologus_brichardi
ENSPNAG00000029574	zgc:171927	100	78.972	ENSORLG00000000602	zgc:171927	100	78.972	Oryzias_latipes
ENSPNAG00000029574	zgc:171927	100	78.972	ENSORLG00020021071	zgc:171927	100	78.972	Oryzias_latipes_hni
ENSPNAG00000029574	zgc:171927	100	78.037	ENSORLG00015010098	zgc:171927	100	78.037	Oryzias_latipes_hsok
ENSPNAG00000029574	zgc:171927	100	79.070	ENSOMEG00000020594	zgc:171927	100	79.070	Oryzias_melastigma
ENSPNAG00000029574	zgc:171927	100	79.535	ENSPFOG00000013810	zgc:171927	99	79.535	Poecilia_formosa
ENSPNAG00000029574	zgc:171927	100	79.070	ENSPLAG00000005869	zgc:171927	100	79.070	Poecilia_latipinna
ENSPNAG00000029574	zgc:171927	100	79.535	ENSPMEG00000022350	zgc:171927	100	79.535	Poecilia_mexicana
ENSPNAG00000029574	zgc:171927	100	79.070	ENSPREG00000017517	zgc:171927	100	79.070	Poecilia_reticulata
ENSPNAG00000029574	zgc:171927	100	79.812	ENSPNYG00000007520	-	100	79.812	Pundamilia_nyererei
ENSPNAG00000029574	zgc:171927	100	87.143	ENSSFOG00015005464	zgc:171927	99	87.143	Scleropages_formosus
ENSPNAG00000029574	zgc:171927	100	78.605	ENSSMAG00000004416	-	100	78.605	Scophthalmus_maximus
ENSPNAG00000029574	zgc:171927	100	79.535	ENSSDUG00000004445	zgc:171927	100	79.535	Seriola_dumerili
ENSPNAG00000029574	zgc:171927	100	79.535	ENSSLDG00000018024	zgc:171927	100	79.535	Seriola_lalandi_dorsalis
ENSPNAG00000029574	zgc:171927	100	80.000	ENSSPAG00000013533	zgc:171927	100	80.000	Stegastes_partitus
ENSPNAG00000029574	zgc:171927	100	78.605	ENSXCOG00000010695	zgc:171927	100	78.605	Xiphophorus_couchianus
ENSPNAG00000029574	zgc:171927	100	78.140	ENSXMAG00000004683	zgc:171927	100	78.140	Xiphophorus_maculatus